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The map label for this gene is licR [H]

Identifier: 148266820

GI number: 148266820

Start: 414587

End: 416542

Strand: Reverse

Name: licR [H]

Synonym: SaurJH9_0381

Alternate gene names: 148266820

Gene position: 416542-414587 (Counterclockwise)

Preceding gene: 148266824

Following gene: 148266819

Centisome position: 14.33

GC content: 34.56

Gene sequence:

>1956_bases
TTGTTAAGTTATAGACAAATCGAAATTTTGTATCTTTTAATTCATGAGCAAACGTTTATTCCAATCAATACCATTGCTAA
TCAACTTGGTGTATCACCTCGTACCATTCAATATGATATAGCATATATTGAGCAATATGCTGAAACTTATCATTACCAAG
TCAGCCGTAATAAAGCTGCAGGCATCAAAGTAACAACAGCTCACGCGACACTATTAAATGAATTAGAGCACAATCTAACA
AATCAAATTCATTTTTCAAAAGATGAACGACTCACACATATCGCTTTAAAGTTATTCGAAACAACCGATCCTGTTTCAAC
AAAGCAACTTGCGCAAGATGTTAATGTTTCGCGTCGGACAATTGCAGATGATATTAAAATGATTCAAGCCCAACTAGATC
AATACCATTTAAAGTTAAATTATGTCCACAATAAAGGATTCAATGTTATTGGTGAGGAAGATCATTATCGTAAAGCGTAT
GCACACTTTATACATCAATATATGAAACAAGCTGCACCTTTTATAGAGGCGGATATCTTTAATTCAGAATCAATCGCATT
GGTTCGCCGTGCCATTATTAAGACATTAAATAGTGAAAATTATCATTTAGTTCAGTCGGCTATCGATGGCTTAATCTATC
ATATACTCATTGCCATTCAGCGTTTAAATGAAAATTTTTCGTTCGATATACCTATCAATGAAATTGATAAATGGCGACAT
ACTAATCAGTATGCTATTGCTTCAAAAATGATAGAAAACTTAGAACGCAGTTGTAATGTCACATTTCCAGAGTCTGAAAT
TATCTTTATCACGTTACATTTACTAGGCTCTAAAATGACCGAACATACAGCATCTTCAATTACCTTTGAATACCATGATT
TATCGCAAAATATACATGAATTGATCACTTGTGTTAGCCAAGAATTAGGCATTGATATGTCAAAAGACAACAAGTTGCAT
ACCAGTCTGATCACACATATCAAACCAGCTATACATCGTATTAAATACGATATGCTACAACCTAATCCTTTGAGGCAAGA
AGTTATGCGTCGCTATCCTCAAATCATTGAAGCCGTTAGCAAGCATATTAGCCCAATTGAACAAGATGCTGCTATTCGCT
TCAACGAAGATGAATTAACATACATTACAATTCACTTCGCATCAAGTATAGAGCGTGTTGCAACACATAAACAATCAATG
ATTAAGGTTGTCTTACTATGTGGTTCTGGTATAGGCACGTCGCAACTTTTAAAATCAAAACTAAATCATCTGTATCCTGA
GTTTCACATTTGGGATGCCTATTCCATTTATCAATTGGAAGAAAGTCGATTATTGCAAGATAACATTGATTATGTCATTT
CAACAGTACCTTGTGAAATATCAGCTGTACCAGTTATTCATGTCGATCCATTTATCAATCAACAATCTCGTCAAAAATTG
AATCAAATTATCAATGACTCAAGAGAACAACGAGTCATGAAAATGGCAACTGATGGCAAGTCACTCGCAGATTTATTGCC
TGAACATCGCATCATTATAAATGAACAACCATTATCAATTGAATCCGCAATTGCAGTGGCTGTGCAACCTTTAATCAATG
ATGGCATTGTCTATTCAAATTATACAGCTGCAATTTTAAAACAATTTGAACAATTCGGGTCATATATGGTCATTAGTCCA
CATATTGCACTTATTCACGCTGGTACTGATTATGTACAGAATGGTGTAGGTTTCGCACTAACATATTTCACTGAAGGGAT
TATCTTTGGTAGTAAAGCTAACGATCCCGTTCACCTTGTAATTACATTAGCAACGGACCACCCCAATGCACATTTAAAGG
CATTGGGACAGTTAAGCGAATGCTTAAGCAACGACTTATATCGACAAGATTTCTTAGATGGGAATATTTTTAAAATTAAA
CAACACATTGCTTTAACTATGACAAAGGAGGTTTAA

Upstream 100 bases:

>100_bases
AAACATTTTGATATGCAATTTTTCGGATTAAAATATGAAAGAGATTGCATATCTACGTTTTTAAGAAATCGCTTACAATT
ACAAATAGGAGGATATTACG

Downstream 100 bases:

>100_bases
TAACGTGTCATTAGACATTTTGTCAACAACACGCATCATTGTAAAAGAACAAGTAAATGATTGGACTGAAGCTATAACTA
TAGCTTCTCAGCCATTACTA

Product: transcriptional antiterminator, BglG

Products: NA

Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]

Number of amino acids: Translated: 651; Mature: 651

Protein sequence:

>651_residues
MLSYRQIEILYLLIHEQTFIPINTIANQLGVSPRTIQYDIAYIEQYAETYHYQVSRNKAAGIKVTTAHATLLNELEHNLT
NQIHFSKDERLTHIALKLFETTDPVSTKQLAQDVNVSRRTIADDIKMIQAQLDQYHLKLNYVHNKGFNVIGEEDHYRKAY
AHFIHQYMKQAAPFIEADIFNSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIAIQRLNENFSFDIPINEIDKWRH
TNQYAIASKMIENLERSCNVTFPESEIIFITLHLLGSKMTEHTASSITFEYHDLSQNIHELITCVSQELGIDMSKDNKLH
TSLITHIKPAIHRIKYDMLQPNPLRQEVMRRYPQIIEAVSKHISPIEQDAAIRFNEDELTYITIHFASSIERVATHKQSM
IKVVLLCGSGIGTSQLLKSKLNHLYPEFHIWDAYSIYQLEESRLLQDNIDYVISTVPCEISAVPVIHVDPFINQQSRQKL
NQIINDSREQRVMKMATDGKSLADLLPEHRIIINEQPLSIESAIAVAVQPLINDGIVYSNYTAAILKQFEQFGSYMVISP
HIALIHAGTDYVQNGVGFALTYFTEGIIFGSKANDPVHLVITLATDHPNAHLKALGQLSECLSNDLYRQDFLDGNIFKIK
QHIALTMTKEV

Sequences:

>Translated_651_residues
MLSYRQIEILYLLIHEQTFIPINTIANQLGVSPRTIQYDIAYIEQYAETYHYQVSRNKAAGIKVTTAHATLLNELEHNLT
NQIHFSKDERLTHIALKLFETTDPVSTKQLAQDVNVSRRTIADDIKMIQAQLDQYHLKLNYVHNKGFNVIGEEDHYRKAY
AHFIHQYMKQAAPFIEADIFNSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIAIQRLNENFSFDIPINEIDKWRH
TNQYAIASKMIENLERSCNVTFPESEIIFITLHLLGSKMTEHTASSITFEYHDLSQNIHELITCVSQELGIDMSKDNKLH
TSLITHIKPAIHRIKYDMLQPNPLRQEVMRRYPQIIEAVSKHISPIEQDAAIRFNEDELTYITIHFASSIERVATHKQSM
IKVVLLCGSGIGTSQLLKSKLNHLYPEFHIWDAYSIYQLEESRLLQDNIDYVISTVPCEISAVPVIHVDPFINQQSRQKL
NQIINDSREQRVMKMATDGKSLADLLPEHRIIINEQPLSIESAIAVAVQPLINDGIVYSNYTAAILKQFEQFGSYMVISP
HIALIHAGTDYVQNGVGFALTYFTEGIIFGSKANDPVHLVITLATDHPNAHLKALGQLSECLSNDLYRQDFLDGNIFKIK
QHIALTMTKEV
>Mature_651_residues
MLSYRQIEILYLLIHEQTFIPINTIANQLGVSPRTIQYDIAYIEQYAETYHYQVSRNKAAGIKVTTAHATLLNELEHNLT
NQIHFSKDERLTHIALKLFETTDPVSTKQLAQDVNVSRRTIADDIKMIQAQLDQYHLKLNYVHNKGFNVIGEEDHYRKAY
AHFIHQYMKQAAPFIEADIFNSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIAIQRLNENFSFDIPINEIDKWRH
TNQYAIASKMIENLERSCNVTFPESEIIFITLHLLGSKMTEHTASSITFEYHDLSQNIHELITCVSQELGIDMSKDNKLH
TSLITHIKPAIHRIKYDMLQPNPLRQEVMRRYPQIIEAVSKHISPIEQDAAIRFNEDELTYITIHFASSIERVATHKQSM
IKVVLLCGSGIGTSQLLKSKLNHLYPEFHIWDAYSIYQLEESRLLQDNIDYVISTVPCEISAVPVIHVDPFINQQSRQKL
NQIINDSREQRVMKMATDGKSLADLLPEHRIIINEQPLSIESAIAVAVQPLINDGIVYSNYTAAILKQFEQFGSYMVISP
HIALIHAGTDYVQNGVGFALTYFTEGIIFGSKANDPVHLVITLATDHPNAHLKALGQLSECLSNDLYRQDFLDGNIFKIK
QHIALTMTKEV

Specific function: Positive regulator of the licABCH operon [H]

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR007737
- InterPro:   IPR011608
- InterPro:   IPR016152
- InterPro:   IPR002178
- InterPro:   IPR013011
- InterPro:   IPR003501
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2; PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 74489; Mature: 74489

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRQIEILYLLIHEQTFIPINTIANQLGVSPRTIQYDIAYIEQYAETYHYQVSRNKAA
CCCCEEEEEEEEEEECCCEEEHHHHHHHHCCCCCEEEEHHHHHHHHHHHHEEEEECCCCC
GIKVTTAHATLLNELEHNLTNQIHFSKDERLTHIALKLFETTDPVSTKQLAQDVNVSRRT
CEEEEHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHH
IADDIKMIQAQLDQYHLKLNYVHNKGFNVIGEEDHYRKAYAHFIHQYMKQAAPFIEADIF
HHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHCCC
NSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIAIQRLNENFSFDIPINEIDKWRH
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHC
TNQYAIASKMIENLERSCNVTFPESEIIFITLHLLGSKMTEHTASSITFEYHDLSQNIHE
CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHCCHHHHHHHHHEEEEHHHHHHHHHH
LITCVSQELGIDMSKDNKLHTSLITHIKPAIHRIKYDMLQPNPLRQEVMRRYPQIIEAVS
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
KHISPIEQDAAIRFNEDELTYITIHFASSIERVATHKQSMIKVVLLCGSGIGTSQLLKSK
HHCCCCCCCCCEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH
LNHLYPEFHIWDAYSIYQLEESRLLQDNIDYVISTVPCEISAVPVIHVDPFINQQSRQKL
HHHCCCCEEEECCEEEEEEHHHHHHHCCCCEEEEECCCCEEEEEEEEECCCCCHHHHHHH
NQIINDSREQRVMKMATDGKSLADLLPEHRIIINEQPLSIESAIAVAVQPLINDGIVYSN
HHHHCCHHHHHHHHHHCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEECC
YTAAILKQFEQFGSYMVISPHIALIHAGTDYVQNGVGFALTYFTEGIIFGSKANDPVHLV
HHHHHHHHHHHHCCEEEEECCEEEEECCHHHHHCCCCEEEEEHHCCEEECCCCCCCEEEE
ITLATDHPNAHLKALGQLSECLSNDLYRQDFLDGNIFKIKQHIALTMTKEV
EEEECCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEHHEEEEEECCC
>Mature Secondary Structure
MLSYRQIEILYLLIHEQTFIPINTIANQLGVSPRTIQYDIAYIEQYAETYHYQVSRNKAA
CCCCEEEEEEEEEEECCCEEEHHHHHHHHCCCCCEEEEHHHHHHHHHHHHEEEEECCCCC
GIKVTTAHATLLNELEHNLTNQIHFSKDERLTHIALKLFETTDPVSTKQLAQDVNVSRRT
CEEEEHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHH
IADDIKMIQAQLDQYHLKLNYVHNKGFNVIGEEDHYRKAYAHFIHQYMKQAAPFIEADIF
HHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHCCC
NSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIAIQRLNENFSFDIPINEIDKWRH
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHC
TNQYAIASKMIENLERSCNVTFPESEIIFITLHLLGSKMTEHTASSITFEYHDLSQNIHE
CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHCCHHHHHHHHHEEEEHHHHHHHHHH
LITCVSQELGIDMSKDNKLHTSLITHIKPAIHRIKYDMLQPNPLRQEVMRRYPQIIEAVS
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
KHISPIEQDAAIRFNEDELTYITIHFASSIERVATHKQSMIKVVLLCGSGIGTSQLLKSK
HHCCCCCCCCCEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH
LNHLYPEFHIWDAYSIYQLEESRLLQDNIDYVISTVPCEISAVPVIHVDPFINQQSRQKL
HHHCCCCEEEECCEEEEEEHHHHHHHCCCCEEEEECCCCEEEEEEEEECCCCCHHHHHHH
NQIINDSREQRVMKMATDGKSLADLLPEHRIIINEQPLSIESAIAVAVQPLINDGIVYSN
HHHHCCHHHHHHHHHHCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEECC
YTAAILKQFEQFGSYMVISPHIALIHAGTDYVQNGVGFALTYFTEGIIFGSKANDPVHLV
HHHHHHHHHHHHCCEEEEECCEEEEECCHHHHHCCCCEEEEEHHCCEEECCCCCCCEEEE
ITLATDHPNAHLKALGQLSECLSNDLYRQDFLDGNIFKIKQHIALTMTKEV
EEEECCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377; 10438772 [H]