Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
---|---|
Accession | NC_009487 |
Length | 2,906,700 |
Click here to switch to the map view.
The map label for this gene is macB [H]
Identifier: 148266624
GI number: 148266624
Start: 221656
End: 222834
Strand: Direct
Name: macB [H]
Synonym: SaurJH9_0184
Alternate gene names: 148266624
Gene position: 221656-222834 (Clockwise)
Preceding gene: 148266623
Following gene: 148266625
Centisome position: 7.63
GC content: 30.7
Gene sequence:
>1179_bases ATGAGGAAAGTTTTAAATATTTTTACAATAGCTTTTAAATCAATATTGAAAAATAAAGGTAGAAATATATTTACAATGAT AGGTATAATCATCGGTATTTCTTCTGTTATTACGATAATGTCTTTGGGAAATGGCTTTAAAAAAACTGCTGCTGATCAAT TTTCAGATGCTGGCGCCGGAAAACAAGAAGCGTTGATTAGCTTTACTTTTAAAGTTGATGAGAAAATCAAAAAGTATCCT TTTAATCAAAGAGATATAGAGTTGGTAAATCAAGTTGATGGCGTACTAGATGCGAAGCTAAAGGAAAATAAAGAAGAAGG AATTGAAGCCACAATAACTAATGTCCAGAAAAAAAGTGACATCTTCATTATAAAAAAACAAAATTTACACTCTTTTAAAG TAGGTAGAGGGTTTGATAAAGAGGATAATGAATTACGTAAGAAAATAGTGGTTATAAATGATCAAGTAGCAAAAACTGTA TTCAATAATAATGCTATTGGTAAATCGCTATATATTGAGGGACAGGGATTTGAAGTCATAGGAATTACGGATAAACTATA TTCTGACTCATCTACCGTTATAATGCCTGAAAATACATTCAACTACTATATGGGACACTTACATCAAGGTCTGCCTACCT TACAGATAATTATTGAAGATGGTTACAATAAAAAAACTGTAGTTAAAAAAGTAGAATCACTATTAAATAAAAAAGGATCG GGCTCTGTTTTAGGTGAGTATACATATACAGACACTGAAGAAATTATCAAAAGTATTGATAAAATTTTTGATAGTATTAC TTATTTTGTAGCAGCTGTTGCCGGTATTTCACTTTTTATTGCTGGTATTGGAGTTATGAATGTCATGTATATATCTGTAG CTGAAAGAACAGAAGAAATTGCGATACGACGTGCATTTGGTGCAAAAAGTCGAGATATTGAACTACAATTTTTAATAGAG AGCATTTTAATATGTGTGACAAGTGGTTTTATTGGACTTATTTTAGGTGTTGTGTTTGCAACAATAATTGATGTATTAAC ACCAGATTATATTAAAAGTGTAGTAAGTTTGAGTTCTGTCATAATTGCGGTTAGTGTGTCGATATTAATTGGACTTCTTT TTGGATGGATACCAGCTCGCGCAGCATCTAAGAAAGAGCTCATAGATATTATAAAATAG
Upstream 100 bases:
>100_bases CTACAATTATTTTAGTCACACATGATCGTAAAGTAGCAGAAAAAGCTGATCGAATAATTCATATTTTGGATGGTCGTATA CAACATGAAGAGGTGATTAA
Downstream 100 bases:
>100_bases TAAATTTAAAATGGTAAAAGTACTGAAGACTAATTATCATATTAAACTGACTATCAACACCAACGATGGAAATGCGTATT AGAATAAAAGTAAGATATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MRKVLNIFTIAFKSILKNKGRNIFTMIGIIIGISSVITIMSLGNGFKKTAADQFSDAGAGKQEALISFTFKVDEKIKKYP FNQRDIELVNQVDGVLDAKLKENKEEGIEATITNVQKKSDIFIIKKQNLHSFKVGRGFDKEDNELRKKIVVINDQVAKTV FNNNAIGKSLYIEGQGFEVIGITDKLYSDSSTVIMPENTFNYYMGHLHQGLPTLQIIIEDGYNKKTVVKKVESLLNKKGS GSVLGEYTYTDTEEIIKSIDKIFDSITYFVAAVAGISLFIAGIGVMNVMYISVAERTEEIAIRRAFGAKSRDIELQFLIE SILICVTSGFIGLILGVVFATIIDVLTPDYIKSVVSLSSVIIAVSVSILIGLLFGWIPARAASKKELIDIIK
Sequences:
>Translated_392_residues MRKVLNIFTIAFKSILKNKGRNIFTMIGIIIGISSVITIMSLGNGFKKTAADQFSDAGAGKQEALISFTFKVDEKIKKYP FNQRDIELVNQVDGVLDAKLKENKEEGIEATITNVQKKSDIFIIKKQNLHSFKVGRGFDKEDNELRKKIVVINDQVAKTV FNNNAIGKSLYIEGQGFEVIGITDKLYSDSSTVIMPENTFNYYMGHLHQGLPTLQIIIEDGYNKKTVVKKVESLLNKKGS GSVLGEYTYTDTEEIIKSIDKIFDSITYFVAAVAGISLFIAGIGVMNVMYISVAERTEEIAIRRAFGAKSRDIELQFLIE SILICVTSGFIGLILGVVFATIIDVLTPDYIKSVVSLSSVIIAVSVSILIGLLFGWIPARAASKKELIDIIK >Mature_392_residues MRKVLNIFTIAFKSILKNKGRNIFTMIGIIIGISSVITIMSLGNGFKKTAADQFSDAGAGKQEALISFTFKVDEKIKKYP FNQRDIELVNQVDGVLDAKLKENKEEGIEATITNVQKKSDIFIIKKQNLHSFKVGRGFDKEDNELRKKIVVINDQVAKTV FNNNAIGKSLYIEGQGFEVIGITDKLYSDSSTVIMPENTFNYYMGHLHQGLPTLQIIIEDGYNKKTVVKKVESLLNKKGS GSVLGEYTYTDTEEIIKSIDKIFDSITYFVAAVAGISLFIAGIGVMNVMYISVAERTEEIAIRRAFGAKSRDIELQFLIE SILICVTSGFIGLILGVVFATIIDVLTPDYIKSVVSLSSVIIAVSVSILIGLLFGWIPARAASKKELIDIIK
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=410, Percent_Identity=28.2926829268293, Blast_Score=144, Evalue=8e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 43336; Mature: 43336
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVLNIFTIAFKSILKNKGRNIFTMIGIIIGISSVITIMSLGNGFKKTAADQFSDAGAG CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC KQEALISFTFKVDEKIKKYPFNQRDIELVNQVDGVLDAKLKENKEEGIEATITNVQKKSD CCCEEEEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHCCCC IFIIKKQNLHSFKVGRGFDKEDNELRKKIVVINDQVAKTVFNNNAIGKSLYIEGQGFEVI EEEEEECCCCEEECCCCCCCCHHHHHHEEEEECHHHHHHHHCCCCCCCEEEEECCCEEEE GITDKLYSDSSTVIMPENTFNYYMGHLHQGLPTLQIIIEDGYNKKTVVKKVESLLNKKGS EECHHHCCCCCCEEECCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCC GSVLGEYTYTDTEEIIKSIDKIFDSITYFVAAVAGISLFIAGIGVMNVMYISVAERTEEI CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIRRAFGAKSRDIELQFLIESILICVTSGFIGLILGVVFATIIDVLTPDYIKSVVSLSSV HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH IIAVSVSILIGLLFGWIPARAASKKELIDIIK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC >Mature Secondary Structure MRKVLNIFTIAFKSILKNKGRNIFTMIGIIIGISSVITIMSLGNGFKKTAADQFSDAGAG CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC KQEALISFTFKVDEKIKKYPFNQRDIELVNQVDGVLDAKLKENKEEGIEATITNVQKKSD CCCEEEEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHCCCC IFIIKKQNLHSFKVGRGFDKEDNELRKKIVVINDQVAKTVFNNNAIGKSLYIEGQGFEVI EEEEEECCCCEEECCCCCCCCHHHHHHEEEEECHHHHHHHHCCCCCCCEEEEECCCEEEE GITDKLYSDSSTVIMPENTFNYYMGHLHQGLPTLQIIIEDGYNKKTVVKKVESLLNKKGS EECHHHCCCCCCEEECCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCC GSVLGEYTYTDTEEIIKSIDKIFDSITYFVAAVAGISLFIAGIGVMNVMYISVAERTEEI CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIRRAFGAKSRDIELQFLIESILICVTSGFIGLILGVVFATIIDVLTPDYIKSVVSLSSV HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH IIAVSVSILIGLLFGWIPARAASKKELIDIIK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA