Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
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Accession | NC_009487 |
Length | 2,906,700 |
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The map label for this gene is czcD [H]
Identifier: 148266594
GI number: 148266594
Start: 181162
End: 182121
Strand: Direct
Name: czcD [H]
Synonym: SaurJH9_0154
Alternate gene names: 148266594
Gene position: 181162-182121 (Clockwise)
Preceding gene: 148266593
Following gene: 148266596
Centisome position: 6.23
GC content: 31.56
Gene sequence:
>960_bases ATGAATGGGAAAAAGGCAAATACGATAAACAGATACAAATATTTTCATCATGTCAATCATCAAAAAATTCAACAAAGTTC TAAAAAGACGCTGTGGGCATCACTAATCATCACATTGTTATTTACAGTGATTGAATTTGTCGGAGGTTTAGTATCTAATT CATTGGCATTACTGTCAGATTCATTTCATATGCTTAGTGATGTATTAGCACTTGGTTTATCTATGTTGGCCATTTATTTT GCAAGTAAAAAGCCGACTGCACGATACACATTTGGATATTTAAGATTTGAGATATTAGTTGCATTTTTAAATGGTTTAGC ATTAATTGTAATTTCAATCTGGATTTTATATGAAGCTATTGTACGTATTATTTATCCGCAACCAATTGAAAGTGGCATTA TGTTTATGATTGCTAGTATTGGTTTACTCGTTAATATTATTTTGACAATTATCCTTGTAAGGTCTTTAAAACAAGAAGAC AATATCAATATTCAAAGTGCATTATGGCATTTCATGGGAGACTTATTGAACTCTATTGGTGTCATCGTTGCAGTTGTATT GATTTACTTTACAGGATGGCGCATCATCGACCCAATCATTAGTATTGTAATTTCACTCATCATTTTACGTGGTGGTTATA AAATTACGCGTAATGCGTGGTTAATTTTAATGGAAAGTGTGCCTCAACATTTGGATACTGATCAAATTATGGCAGATATT AAAAACATAGATGGCATATTAGATGTACATGAATTTCATTTGTGGAGTATTACAACAGAGCATTATTCATTAAGTGCCCA TGTTGTGTTAGATAAAAAATATGAGGGTGATGATTATCAAGCGATTGATCAAGTATCATCATTGTTGAAAGAAAAATATG GCATTGCACATTCAACGTTGCAAATTGAAAACTTGCAATTGAATCCATTAGATGAGCCATACTTCGACAAATTAACATAA
Upstream 100 bases:
>100_bases TAATTACGGAAGCATTAATATTAATCTGAGAAGCTATAAAGAATTATTTTTAAAAGCGACAATATTAAATACGACGCATT TATTTAGGAGTGGCAAACGT
Downstream 100 bases:
>100_bases ATAAAACATTGTACAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAA AATGCGCTTGTAACAAGCTT
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MNGKKANTINRYKYFHHVNHQKIQQSSKKTLWASLIITLLFTVIEFVGGLVSNSLALLSDSFHMLSDVLALGLSMLAIYF ASKKPTARYTFGYLRFEILVAFLNGLALIVISIWILYEAIVRIIYPQPIESGIMFMIASIGLLVNIILTIILVRSLKQED NINIQSALWHFMGDLLNSIGVIVAVVLIYFTGWRIIDPIISIVISLIILRGGYKITRNAWLILMESVPQHLDTDQIMADI KNIDGILDVHEFHLWSITTEHYSLSAHVVLDKKYEGDDYQAIDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT
Sequences:
>Translated_319_residues MNGKKANTINRYKYFHHVNHQKIQQSSKKTLWASLIITLLFTVIEFVGGLVSNSLALLSDSFHMLSDVLALGLSMLAIYF ASKKPTARYTFGYLRFEILVAFLNGLALIVISIWILYEAIVRIIYPQPIESGIMFMIASIGLLVNIILTIILVRSLKQED NINIQSALWHFMGDLLNSIGVIVAVVLIYFTGWRIIDPIISIVISLIILRGGYKITRNAWLILMESVPQHLDTDQIMADI KNIDGILDVHEFHLWSITTEHYSLSAHVVLDKKYEGDDYQAIDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT >Mature_319_residues MNGKKANTINRYKYFHHVNHQKIQQSSKKTLWASLIITLLFTVIEFVGGLVSNSLALLSDSFHMLSDVLALGLSMLAIYF ASKKPTARYTFGYLRFEILVAFLNGLALIVISIWILYEAIVRIIYPQPIESGIMFMIASIGLLVNIILTIILVRSLKQED NINIQSALWHFMGDLLNSIGVIVAVVLIYFTGWRIIDPIISIVISLIILRGGYKITRNAWLILMESVPQHLDTDQIMADI KNIDGILDVHEFHLWSITTEHYSLSAHVVLDKKYEGDDYQAIDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT
Specific function: Involved in divalent cation and potassium homeostasis in the cell. Catalyzes the active efflux of zinc, cadmium and cobalt, in exchange for potassium and H(+) ions [H]
COG id: COG1230
COG function: function code P; Co/Zn/Cd efflux system component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily [H]
Homologues:
Organism=Homo sapiens, GI21359890, Length=306, Percent_Identity=30.0653594771242, Blast_Score=156, Evalue=2e-38, Organism=Homo sapiens, GI21361112, Length=324, Percent_Identity=27.4691358024691, Blast_Score=154, Evalue=7e-38, Organism=Homo sapiens, GI52352805, Length=309, Percent_Identity=30.0970873786408, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI289803013, Length=295, Percent_Identity=32.2033898305085, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI289803009, Length=295, Percent_Identity=32.2033898305085, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI289803007, Length=295, Percent_Identity=32.2033898305085, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI289803003, Length=295, Percent_Identity=32.2033898305085, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI64762489, Length=295, Percent_Identity=32.2033898305085, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI20070323, Length=338, Percent_Identity=26.9230769230769, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI14210520, Length=220, Percent_Identity=30, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI52351208, Length=116, Percent_Identity=39.6551724137931, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI52352803, Length=123, Percent_Identity=40.650406504065, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI222080086, Length=125, Percent_Identity=30.4, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI40255009, Length=125, Percent_Identity=30.4, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI21687224, Length=252, Percent_Identity=20.2380952380952, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI301898545, Length=252, Percent_Identity=20.2380952380952, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1786966, Length=281, Percent_Identity=38.4341637010676, Blast_Score=174, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17555794, Length=318, Percent_Identity=31.7610062893082, Blast_Score=183, Evalue=1e-46, Organism=Caenorhabditis elegans, GI193210990, Length=340, Percent_Identity=29.7058823529412, Blast_Score=180, Evalue=7e-46, Organism=Caenorhabditis elegans, GI17555796, Length=311, Percent_Identity=31.1897106109325, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI32564488, Length=310, Percent_Identity=30.3225806451613, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17550440, Length=131, Percent_Identity=35.1145038167939, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17550442, Length=131, Percent_Identity=35.1145038167939, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324892, Length=150, Percent_Identity=30.6666666666667, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6323899, Length=115, Percent_Identity=37.3913043478261, Blast_Score=80, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6320411, Length=175, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6325032, Length=254, Percent_Identity=28.740157480315, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI24583858, Length=319, Percent_Identity=24.4514106583072, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI24656728, Length=337, Percent_Identity=29.3768545994065, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI24656724, Length=337, Percent_Identity=29.3768545994065, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI24656720, Length=337, Percent_Identity=29.3768545994065, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI24656715, Length=337, Percent_Identity=29.3768545994065, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI21357035, Length=337, Percent_Identity=29.3768545994065, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI24584409, Length=149, Percent_Identity=30.8724832214765, Blast_Score=94, Evalue=9e-20, Organism=Drosophila melanogaster, GI28574430, Length=149, Percent_Identity=30.8724832214765, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24585900, Length=151, Percent_Identity=32.4503311258278, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24585898, Length=151, Percent_Identity=32.4503311258278, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24585896, Length=151, Percent_Identity=32.4503311258278, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI19921672, Length=151, Percent_Identity=32.4503311258278, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24645863, Length=107, Percent_Identity=37.3831775700935, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 36236; Mature: 36236
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGKKANTINRYKYFHHVNHQKIQQSSKKTLWASLIITLLFTVIEFVGGLVSNSLALLSD CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH SFHMLSDVLALGLSMLAIYFASKKPTARYTFGYLRFEILVAFLNGLALIVISIWILYEAI HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRIIYPQPIESGIMFMIASIGLLVNIILTIILVRSLKQEDNINIQSALWHFMGDLLNSIG HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VIVAVVLIYFTGWRIIDPIISIVISLIILRGGYKITRNAWLILMESVPQHLDTDQIMADI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHCCHHHHHHHH KNIDGILDVHEFHLWSITTEHYSLSAHVVLDKKYEGDDYQAIDQVSSLLKEKYGIAHSTL HHCCCHHHHHHHHEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHEE QIENLQLNPLDEPYFDKLT EEECCCCCCCCCCCCCCCC >Mature Secondary Structure MNGKKANTINRYKYFHHVNHQKIQQSSKKTLWASLIITLLFTVIEFVGGLVSNSLALLSD CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH SFHMLSDVLALGLSMLAIYFASKKPTARYTFGYLRFEILVAFLNGLALIVISIWILYEAI HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRIIYPQPIESGIMFMIASIGLLVNIILTIILVRSLKQEDNINIQSALWHFMGDLLNSIG HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VIVAVVLIYFTGWRIIDPIISIVISLIILRGGYKITRNAWLILMESVPQHLDTDQIMADI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHCCHHHHHHHH KNIDGILDVHEFHLWSITTEHYSLSAHVVLDKKYEGDDYQAIDQVSSLLKEKYGIAHSTL HHCCCHHHHHHHHEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHEE QIENLQLNPLDEPYFDKLT EEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9308178; 9384377; 9099864 [H]