| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is engA
Identifier: 147675115
GI number: 147675115
Start: 306242
End: 307726
Strand: Direct
Name: engA
Synonym: VC0395_A0292
Alternate gene names: 147675115
Gene position: 306242-307726 (Clockwise)
Preceding gene: 147675122
Following gene: 147675742
Centisome position: 10.13
GC content: 49.23
Gene sequence:
>1485_bases ATGGTACCTGTTGTTGCTCTTGTTGGGCGTCCAAACGTCGGTAAATCGACGCTGTTTAATCGACTCACTCGCACACGGGA CGCATTAGTCGCGGATTTTCCCGGCTTAACGCGTGATCGCAAATACGGTCAAGCTAAGTTGGGTGAGCACGAATTTATCG TGATCGATACCGGCGGTATCGATGGCTCTGAAGAAGGCGTTGAGACCAAAATGGCACAGCAATCGCTCGCTGCGATTGAC GAAGCTGATGTGGTGCTGTTTATGGTGGATGGCCGCGCGGGTCTGACGGTTGCAGATGAAGCGATTGCTCAGCATCTGCG CCGTATTGAAAAGCCAGCAATTTTGGTTGTGAACAAAGTGGATGGTATCGATGCGGATGCCGCTTCGGCGGAGTTCTGGC AACTCGGTATGGATCAGATGTACCAGATCGCCGCCGCGCATGGCCGTGGTGTGGGCGCATTGATTGACCGTGTGCTGAAT CCGTTTGCTGAGCAAATGGAATCTGAGCAAGCTCAACTTGAAGATCTGACCAACGAAGAAGATCCAGAAGAAGAGCAGTT AGAGTACAGCGAAGAAGAAGCGGAAGCCGAATACAAGCGCCTGCAAGACTTGCCGATTAAACTCGCGATCATCGGTCGTC CAAACGTGGGTAAATCAACACTGACTAACCGCATTCTGGGTGAAGAGCGAGTCGTGGTTTACGATATGCCGGGAACCACG CGTGACTCTATCTACATCCCAATGAAACGTGATGAGCGTGAATATGTGTTGATTGATACTGCGGGCGTGCGTCGCCGTAA GCGTATCAATGAAACCGTTGAGAAGTTCTCGGTAGTCAAAACCTTACAAGCGATTGAAGATGCTAACGTGGTATTGTTGG TGGTCGACGCGCGTGAGAACATCTCAGATCAAGATCTTAGCCTACTTGGTTTTGCCCTAAATTCTGGCCGCTCCATTGTA ATTGCGGTGAATAAGTGGGATGGTCTGAGTTTTGACGTCAAAGAACACGTGAAGAAAGAGCTAGACCGTCGACTGGGTTT CGTTGATTTTGCACGCATCCACTTTATTTCTGCACTGCATGGCACAGGTGTCGGTCACTTGTTTGAATCGGTGCAAGAAG CGTATCGCTCTGCAACCACGCGTGTGGGAACGTCTGTACTGACTCGTATTATGAAAATGGCCACCGATGATCACCAGCCG CCTATGGTGCGTGGGCGTCGTGTGAAACTGAAATATGCACACGCGGGTGGTTACAACCCACCGATCATCGTTATCCACGG TAACCAAGTCAACGAGCTGCCAGATTCATACAAACGTTATTTGATGAACTATTACCGTAAATCGCTAGAAATCATGGGTA CACCAATTCGTATCCAGTTCCAAAATAGCGAAAACCCATTTGAAGGTAAGACGAATAAAATGACCCTCTCACAAGAGCGA CAACGTAAGCGATTGATGAGCATGGTGAAAAACCGCAGAAAATAA
Upstream 100 bases:
>100_bases ATCATAATGATGATAATGAAAGTGGTTATAGGTAAAAATTTAGCGCTTGTGACAGAGTGTTTACCTATAACTACATAAAT GAAAGTTTGTAGAGGTTGTT
Downstream 100 bases:
>100_bases TTTATAAAGCCCAAGTTTACTTGGGCTTTTTTGTCTCTGAAGGAGAGAGATGCATGACCTATTGCGCAACAGAAGTCACC TTTCCACAAGGAATTACATC
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGSEEGVETKMAQQSLAAID EADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLN PFAEQMESEQAQLEDLTNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTT RDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIV IAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQP PMVRGRRVKLKYAHAGGYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPFEGKTNKMTLSQER QRKRLMSMVKNRRK
Sequences:
>Translated_494_residues MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGSEEGVETKMAQQSLAAID EADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLN PFAEQMESEQAQLEDLTNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTT RDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIV IAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQP PMVRGRRVKLKYAHAGGYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPFEGKTNKMTLSQER QRKRLMSMVKNRRK >Mature_494_residues MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGSEEGVETKMAQQSLAAID EADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLN PFAEQMESEQAQLEDLTNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTT RDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIV IAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQP PMVRGRRVKLKYAHAGGYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPFEGKTNKMTLSQER QRKRLMSMVKNRRK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=500, Percent_Identity=71.2, Blast_Score=719, Evalue=0.0, Organism=Escherichia coli, GI1788919, Length=137, Percent_Identity=34.3065693430657, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI2367268, Length=104, Percent_Identity=39.4230769230769, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323665, Length=144, Percent_Identity=31.9444444444444, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_VIBC3 (A5F3E6)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - ProteinModelPortal: A5F3E6 - SMR: A5F3E6 - STRING: A5F3E6 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A0292 - eggNOG: COG1160 - HOGENOM: HBG592135 - OMA: KCEKAFD - ProtClustDB: PRK00093 - BioCyc: VCHO345073:VC0395_A0292-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - SMART: SM00382 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 55639; Mature: 55639
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCC DGSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKV CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHCCCEEEEEECC DGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQMESEQAQLEDLTNEE CCCCCCCCCHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTT CCCHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCC RDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDAREN CCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC ISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALH CCCCCHHHHEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH GTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGGYNP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCC PIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPFEGKTNKMTLSQER CEEEEECCCCHHCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEHHHHH QRKRLMSMVKNRRK HHHHHHHHHHHCCC >Mature Secondary Structure MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCC DGSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKV CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHCCCEEEEEECC DGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQMESEQAQLEDLTNEE CCCCCCCCCHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTT CCCHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCC RDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDAREN CCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC ISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALH CCCCCHHHHEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH GTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGGYNP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCC PIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPFEGKTNKMTLSQER CEEEEECCCCHHCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEHHHHH QRKRLMSMVKNRRK HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA