| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
Click here to switch to the map view.
The map label for this gene is 147674137
Identifier: 147674137
GI number: 147674137
Start: 335503
End: 335832
Strand: Direct
Name: 147674137
Synonym: VC0395_A0315
Alternate gene names: NA
Gene position: 335503-335832 (Clockwise)
Preceding gene: 147673540
Following gene: 147675073
Centisome position: 11.09
GC content: 50.3
Gene sequence:
>330_bases ATGTTCCATGCCCATGTTTATTTTGACCCAGACCAAGCGATTGTCGCGGAGCGCTTTCGCCAACAAATTGCCCGTGAACG CCGTGATGTGATCGCGTTATTTGGTTTAGTTCCGCGTCGTGTTGGCCCGCATGTTAAGCCGATGTTTGAAATGCATTTTC GCGATAACCAACACGGCTTACTGGAATGGTTAGAGGAAAATCGCGGTGCGCTGAGTGTACTGATCCATCCGGTATCGGGC GATGATGCTTACGATCATCAAGACGACCGTATCCGCTGGCTCGGTGAGCCGCTAGGTTTAAATCGCACCATTTTCCGTTA TACACAGTGA
Upstream 100 bases:
>100_bases TCGAAGAAATCGACCTTATTGTGCAAATTCGACTGCTGATATTGTGTTTAGTGTAGCGCTATGCTGACCTCGTCCTGTTG TTCTCTCCTAAGGAGTTACT
Downstream 100 bases:
>100_bases GTCCTCCTAGTCGATGACTCAACGAGTTGATTAAATCGGAATTGAAGATAACCACATAAAAACCAATAAGATTTTTATCG CTACGGCGAACTTTGAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: 4 5-Dioxygenase; DOPA-Dioxygenase-Related Protein; DOPA-Dioxygenase-Like Protein
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MFHAHVYFDPDQAIVAERFRQQIARERRDVIALFGLVPRRVGPHVKPMFEMHFRDNQHGLLEWLEENRGALSVLIHPVSG DDAYDHQDDRIRWLGEPLGLNRTIFRYTQ
Sequences:
>Translated_109_residues MFHAHVYFDPDQAIVAERFRQQIARERRDVIALFGLVPRRVGPHVKPMFEMHFRDNQHGLLEWLEENRGALSVLIHPVSG DDAYDHQDDRIRWLGEPLGLNRTIFRYTQ >Mature_109_residues MFHAHVYFDPDQAIVAERFRQQIARERRDVIALFGLVPRRVGPHVKPMFEMHFRDNQHGLLEWLEENRGALSVLIHPVSG DDAYDHQDDRIRWLGEPLGLNRTIFRYTQ
Specific function: Unknown
COG id: COG3805
COG function: function code Q; Aromatic ring-cleaving dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12933; Mature: 12933
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHAHVYFDPDQAIVAERFRQQIARERRDVIALFGLVPRRVGPHVKPMFEMHFRDNQHGL CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCCHHH LEWLEENRGALSVLIHPVSGDDAYDHQDDRIRWLGEPLGLNRTIFRYTQ HHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEEECC >Mature Secondary Structure MFHAHVYFDPDQAIVAERFRQQIARERRDVIALFGLVPRRVGPHVKPMFEMHFRDNQHGL CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCCHHH LEWLEENRGALSVLIHPVSGDDAYDHQDDRIRWLGEPLGLNRTIFRYTQ HHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA