| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is pstS [H]
Identifier: 147673708
GI number: 147673708
Start: 264986
End: 265963
Strand: Direct
Name: pstS [H]
Synonym: VC0395_A0255
Alternate gene names: 147673708
Gene position: 264986-265963 (Clockwise)
Preceding gene: 147675436
Following gene: 147675548
Centisome position: 8.76
GC content: 52.56
Gene sequence:
>978_bases ATGAGCCGCATGCTAAGTCGCGTTGGTTGGTTGAGTTCATTGGTTTTGGTTTCATCCACCGCTTGGGCGTTGGATGAAGC GCTGCCACACTATGAAAAAGTCAGCGGTATTTCGGGCAGCCTATTGTCCGTCGGTTCGGATACGCTGGCGGGCATGACTA CGCTGTGGGTGGAGGAGTTTCAAGCCTATTACCCTGCAGTCAATGCGCAAGTGCAAGCCTCAGGTTCGGCAACTGCGCCG CCAGCATTATCAGAAAGCACGGCGCAGTTTGGCCCGATGAGCCGCCCAATGCGCAGCAGTGAAATTGCCGCGTTTGAAGC GATGCACGGCTACAAGCCAACGGCATTGCGTGTGGCGATTGATGCGGTCGGGATTTTTGTGCATCGAGATAATCCGATCA AGGGGCTGAATTTCCAGCAACTGGATGCGATTTTTTCCGCCACATTGCGCTGTGGTGCCACTCAGCCGATTGTCACTTGG TCTCAGCTTGGTCTGCCTTATGATTGGGCAAAGCGCAATATTCAACTGTTTGGTCGCAACTCGGTATCCGGTACCTACGG CTATTTTAAGCAAAACGCGCTGTGCCAAGGGGATTTCCAGAACCGAGTCAATGAGCAGCCGGGCTCGGCTTCGGTGGTGC AGTCGGTTGCCTCTTCAATCAATACGCTCGGTTATTCAGGGGTGGGTTATCGTGTTTCTGGGGTGAAGCTGCTGCCGATT GCGCGTGAAGGGAATGACTATGTTGAGCCAACTCAAGCCAATATTCTGTCGGGAGCCTACCCGTTATCGCGCTATTTGTA TGTGTATGTGAATAAAAATCCTAACCGAGATTTGTCGCCGATTGAGCGCGAATTTATTCGCTTTATGTTTTCACGGCAGG GACAGGCCTTGGTTGCGAAAGATGGCTATTTGCCCATCACTGCGCTGGTGGCAGAGCAAGAGTTAGCCAAAGTTGGCGTT AAGCCCATCATCGACTGA
Upstream 100 bases:
>100_bases ACGCACTTGCACACCATGACACGCATTTGGATATCTACAGTAAAGTCGGTGTCGGCAGTAAGTTTTCGTTTGTTTTACCT AAGCGGTTGGTGGCGAAAGG
Downstream 100 bases:
>100_bases GTGATGAAATGAAAAACGCCCAACTTGAGTTGGGCGTTTTTCATCGAATTGCAGTGAGTAGGCTGGCTTAAAACAGCAGT TGCCAGCCGACTTCACGCCA
Product: putative phosphate ABC transporter, periplasmic phosphate-binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSRMLSRVGWLSSLVLVSSTAWALDEALPHYEKVSGISGSLLSVGSDTLAGMTTLWVEEFQAYYPAVNAQVQASGSATAP PALSESTAQFGPMSRPMRSSEIAAFEAMHGYKPTALRVAIDAVGIFVHRDNPIKGLNFQQLDAIFSATLRCGATQPIVTW SQLGLPYDWAKRNIQLFGRNSVSGTYGYFKQNALCQGDFQNRVNEQPGSASVVQSVASSINTLGYSGVGYRVSGVKLLPI AREGNDYVEPTQANILSGAYPLSRYLYVYVNKNPNRDLSPIEREFIRFMFSRQGQALVAKDGYLPITALVAEQELAKVGV KPIID
Sequences:
>Translated_325_residues MSRMLSRVGWLSSLVLVSSTAWALDEALPHYEKVSGISGSLLSVGSDTLAGMTTLWVEEFQAYYPAVNAQVQASGSATAP PALSESTAQFGPMSRPMRSSEIAAFEAMHGYKPTALRVAIDAVGIFVHRDNPIKGLNFQQLDAIFSATLRCGATQPIVTW SQLGLPYDWAKRNIQLFGRNSVSGTYGYFKQNALCQGDFQNRVNEQPGSASVVQSVASSINTLGYSGVGYRVSGVKLLPI AREGNDYVEPTQANILSGAYPLSRYLYVYVNKNPNRDLSPIEREFIRFMFSRQGQALVAKDGYLPITALVAEQELAKVGV KPIID >Mature_324_residues SRMLSRVGWLSSLVLVSSTAWALDEALPHYEKVSGISGSLLSVGSDTLAGMTTLWVEEFQAYYPAVNAQVQASGSATAPP ALSESTAQFGPMSRPMRSSEIAAFEAMHGYKPTALRVAIDAVGIFVHRDNPIKGLNFQQLDAIFSATLRCGATQPIVTWS QLGLPYDWAKRNIQLFGRNSVSGTYGYFKQNALCQGDFQNRVNEQPGSASVVQSVASSINTLGYSGVGYRVSGVKLLPIA REGNDYVEPTQANILSGAYPLSRYLYVYVNKNPNRDLSPIEREFIRFMFSRQGQALVAKDGYLPITALVAEQELAKVGVK PIID
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35362; Mature: 35230
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRMLSRVGWLSSLVLVSSTAWALDEALPHYEKVSGISGSLLSVGSDTLAGMTTLWVEEF CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHH QAYYPAVNAQVQASGSATAPPALSESTAQFGPMSRPMRSSEIAAFEAMHGYKPTALRVAI HHHCCCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCHHEEEEE DAVGIFVHRDNPIKGLNFQQLDAIFSATLRCGATQPIVTWSQLGLPYDWAKRNIQLFGRN EEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHCCCCHHHHCCCEEEEECC SVSGTYGYFKQNALCQGDFQNRVNEQPGSASVVQSVASSINTLGYSGVGYRVSGVKLLPI CCCCCHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEE AREGNDYVEPTQANILSGAYPLSRYLYVYVNKNPNRDLSPIEREFIRFMFSRQGQALVAK EECCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEC DGYLPITALVAEQELAKVGVKPIID CCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SRMLSRVGWLSSLVLVSSTAWALDEALPHYEKVSGISGSLLSVGSDTLAGMTTLWVEEF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHH QAYYPAVNAQVQASGSATAPPALSESTAQFGPMSRPMRSSEIAAFEAMHGYKPTALRVAI HHHCCCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCHHEEEEE DAVGIFVHRDNPIKGLNFQQLDAIFSATLRCGATQPIVTWSQLGLPYDWAKRNIQLFGRN EEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHCCCCHHHHCCCEEEEECC SVSGTYGYFKQNALCQGDFQNRVNEQPGSASVVQSVASSINTLGYSGVGYRVSGVKLLPI CCCCCHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEE AREGNDYVEPTQANILSGAYPLSRYLYVYVNKNPNRDLSPIEREFIRFMFSRQGQALVAK EECCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEC DGYLPITALVAEQELAKVGVKPIID CCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA