| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is cya1 [H]
Identifier: 146343845
GI number: 146343845
Start: 7407684
End: 7409777
Strand: Reverse
Name: cya1 [H]
Synonym: BRADO7095
Alternate gene names: 146343845
Gene position: 7409777-7407684 (Counterclockwise)
Preceding gene: 146343850
Following gene: 146343843
Centisome position: 99.37
GC content: 69.29
Gene sequence:
>2094_bases GTGACGGCGACCCCAGGCTCATCGCCCACCCCCGCGCAGCGCTCCGAGCAGCTGACGGTCAGCATCCGCTTCGCGGTGTC CGCGCTCGTCCTGGCCGCGATCCTGCTCACGGCCTTTGGCTCCAGCCTGCTGTGGTGGCGGACGTCGGAGGCGATCAGCC GGCAGCTCGCCAGCACCATCAACAGCCAGATTGCCGGAGCGGTGCGCAAGGAGGTGACGGCGATCGTCGGCGAGGCGCAA GCCGCGCACACCGCGATCCGCACCCTGTTTCTGCAGAACGTGCTCGACACCCGCGAGGCCGACAAGCGCGAGTTCGTGTT CCTGTCGCAGCTGCAGTCGCAGGCGACGATCTCGTGGGCGGCGTTCGGCTGGCCGGACGGCTCGTTCTTCGCCGCGCACA AGCTCGGCGATCAGCGCCTCGAAATGATGGAGATCTCGCTGACCGATCATCCGGGCCAGCGCCGTGTCGACGCGTATGAC GTCGTGCCCGGCGACATCGAATTTACCTCGCGCCGGTTCGAGCCGACCAGCTTCAAGGTCGCCGATCAGCCCTGGTTCAA GCAGGGTCTCGCCGCCGACGAGCCGCGCTGGTTCAGCGTCGATCAGCATCCGGTGGGACGACGTCCCGCGATCGCGCTGG CAGGGCCGATCGATGTCTACCAGGAGCGGCAGGGCGTGCTCGCCATCATCGTCGAGCATGCGCGGATCGCACGCTTTCTC GCCCAGCTGCAGGTCGGCCAGACCGGCAGCGCCTTCATCCTGGAACGTGATGGCGCGGTGGTGGCCGCGCCCGATGCCGA TGCGGACGAGGAACATGCCGGACGAGACCGTCAGCCGCTGCTGCCGGTCGCACAGCAGGCGATGCGCTCCGCGGTCGAGG GTGACGAGGCCTGGCGAGGCCGGGTGCAATCGGGTGACGGCGCGTTCGAGGTCGCGCGTACGCCGCTGCCGTTCCCGGGC TGGTCGCTCGTCACGGTGATTCCGGAAGCCGAATTTCTCGGCCCGGTCGATGCCGCGCTGCGACGGGTGATCATCGGCCT CGGTATCGGCGCGGTGCTCGCCGCGCTCGCCTCCGCCGCGCTGGCGCGCGCGGTGATCGCGGCGCCGCTCGGCCGCGTCG TCGCCGAGCTGCGCCATGTCGAGGCGTTCGCGCTCGCGCAAGTCCGCCGCCATCCCTCGCGGCTGCGCGAGATCGCGAGC CTGTCCGGGGCCATCGCCGAGATGGCCGGCGGGCTGTCGTCGTTCGGCAAGTTCATTCCGGCTGATCTCGTCCGGCAATT GCTGCGCCAAGGCGTCGACGCCAGGCCCGGCGGTCACCTCCAGGAGCTCAGCGTGATGTTCATCGACATCGCCGGCTTTA CCGGCCTGTCGGAGCGGATGGGCGATCGCGTCGTGCCGCTGCTGTCACGCTATCTCGATCTGATCTCGACCGTCATCGTC GATCATGGCGGCACGATCGACAAGTTCATCGGCGATGCGGTGATGGCGTTCTGGGGCGCGCCCGCGGCGCAGCCGGATCA TGCCGTGCTGTGCTGCCGCGCCGCGCTGGCCTGCCGGGCGGCGGTCGAGGGCAGCGACCTCCGCGACGAGGATGGGCAGC CGCTGCGCATCCGCATCGGTATCAATTCCGGCCGCATGCTGGTCGGCAATATCGGCTCCGAGCTGCGGCTCAACTACACC GTGATCGGCGATGCCGTGAACGTGGCGAGCCGGCTGGAAGGCGCCAACAAGACCTATGGCACGACGATCCTGATCGGTGA GGCCACGGCGCGGCTTTCCGGCGATGCGTTCGTGGCTCGCGAGATCGACCGCATCGCCGTCTACGGCCGCGAGGAAGGCC TGGCGGTGCACGAGCTCGTCGGGCTGGCCGAGGACGTTGGCGCGCAGCAGCGGAGCTGGATCGCGCATTATGCCCGCGGG CTTCGCGACTATCGCGCGCGCGATTTCGAGGCTGCCATCGTCGCCTTCGAAGCCGTGGTGGCGCTCAAGCCCGGCGATCG CGCCGCCGAGGTCATGATCGCGCGCTGCCGGACATGGGCCGAGACGCAGCCGGATCAGCATTGGCGCGCCGTCACCGCGC TGACGAGCAAATAG
Upstream 100 bases:
>100_bases GGGCAATGCTGATAGCTCGTTGTTGCCGCGAGCGAACCGCGCGACGGATCGGCCGATCATATGCCCGGCGCGGCCGTCCG GTGGGAGGGACAGACCTGCA
Downstream 100 bases:
>100_bases AGCGTGCGGCGATCAGGCCGATTTGAGCTTGCCGCGCAGCGGCCGCCGTCCGGCGAATACGGCGGCGAGATCCTGGGTCG GCGCGGCCTCGTCCTCGTCG
Product: putative adenylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 1; Adenylyl cyclase 1 [H]
Number of amino acids: Translated: 697; Mature: 696
Protein sequence:
>697_residues MTATPGSSPTPAQRSEQLTVSIRFAVSALVLAAILLTAFGSSLLWWRTSEAISRQLASTINSQIAGAVRKEVTAIVGEAQ AAHTAIRTLFLQNVLDTREADKREFVFLSQLQSQATISWAAFGWPDGSFFAAHKLGDQRLEMMEISLTDHPGQRRVDAYD VVPGDIEFTSRRFEPTSFKVADQPWFKQGLAADEPRWFSVDQHPVGRRPAIALAGPIDVYQERQGVLAIIVEHARIARFL AQLQVGQTGSAFILERDGAVVAAPDADADEEHAGRDRQPLLPVAQQAMRSAVEGDEAWRGRVQSGDGAFEVARTPLPFPG WSLVTVIPEAEFLGPVDAALRRVIIGLGIGAVLAALASAALARAVIAAPLGRVVAELRHVEAFALAQVRRHPSRLREIAS LSGAIAEMAGGLSSFGKFIPADLVRQLLRQGVDARPGGHLQELSVMFIDIAGFTGLSERMGDRVVPLLSRYLDLISTVIV DHGGTIDKFIGDAVMAFWGAPAAQPDHAVLCCRAALACRAAVEGSDLRDEDGQPLRIRIGINSGRMLVGNIGSELRLNYT VIGDAVNVASRLEGANKTYGTTILIGEATARLSGDAFVAREIDRIAVYGREEGLAVHELVGLAEDVGAQQRSWIAHYARG LRDYRARDFEAAIVAFEAVVALKPGDRAAEVMIARCRTWAETQPDQHWRAVTALTSK
Sequences:
>Translated_697_residues MTATPGSSPTPAQRSEQLTVSIRFAVSALVLAAILLTAFGSSLLWWRTSEAISRQLASTINSQIAGAVRKEVTAIVGEAQ AAHTAIRTLFLQNVLDTREADKREFVFLSQLQSQATISWAAFGWPDGSFFAAHKLGDQRLEMMEISLTDHPGQRRVDAYD VVPGDIEFTSRRFEPTSFKVADQPWFKQGLAADEPRWFSVDQHPVGRRPAIALAGPIDVYQERQGVLAIIVEHARIARFL AQLQVGQTGSAFILERDGAVVAAPDADADEEHAGRDRQPLLPVAQQAMRSAVEGDEAWRGRVQSGDGAFEVARTPLPFPG WSLVTVIPEAEFLGPVDAALRRVIIGLGIGAVLAALASAALARAVIAAPLGRVVAELRHVEAFALAQVRRHPSRLREIAS LSGAIAEMAGGLSSFGKFIPADLVRQLLRQGVDARPGGHLQELSVMFIDIAGFTGLSERMGDRVVPLLSRYLDLISTVIV DHGGTIDKFIGDAVMAFWGAPAAQPDHAVLCCRAALACRAAVEGSDLRDEDGQPLRIRIGINSGRMLVGNIGSELRLNYT VIGDAVNVASRLEGANKTYGTTILIGEATARLSGDAFVAREIDRIAVYGREEGLAVHELVGLAEDVGAQQRSWIAHYARG LRDYRARDFEAAIVAFEAVVALKPGDRAAEVMIARCRTWAETQPDQHWRAVTALTSK >Mature_696_residues TATPGSSPTPAQRSEQLTVSIRFAVSALVLAAILLTAFGSSLLWWRTSEAISRQLASTINSQIAGAVRKEVTAIVGEAQA AHTAIRTLFLQNVLDTREADKREFVFLSQLQSQATISWAAFGWPDGSFFAAHKLGDQRLEMMEISLTDHPGQRRVDAYDV VPGDIEFTSRRFEPTSFKVADQPWFKQGLAADEPRWFSVDQHPVGRRPAIALAGPIDVYQERQGVLAIIVEHARIARFLA QLQVGQTGSAFILERDGAVVAAPDADADEEHAGRDRQPLLPVAQQAMRSAVEGDEAWRGRVQSGDGAFEVARTPLPFPGW SLVTVIPEAEFLGPVDAALRRVIIGLGIGAVLAALASAALARAVIAAPLGRVVAELRHVEAFALAQVRRHPSRLREIASL SGAIAEMAGGLSSFGKFIPADLVRQLLRQGVDARPGGHLQELSVMFIDIAGFTGLSERMGDRVVPLLSRYLDLISTVIVD HGGTIDKFIGDAVMAFWGAPAAQPDHAVLCCRAALACRAAVEGSDLRDEDGQPLRIRIGINSGRMLVGNIGSELRLNYTV IGDAVNVASRLEGANKTYGTTILIGEATARLSGDAFVAREIDRIAVYGREEGLAVHELVGLAEDVGAQQRSWIAHYARGL RDYRARDFEAAIVAFEAVVALKPGDRAAEVMIARCRTWAETQPDQHWRAVTALTSK
Specific function: Plays essential roles in regulation of cellular metabolism by catalyzing the synthesis of a second messenger, cAMP [H]
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HAMP domain [H]
Homologues:
Organism=Homo sapiens, GI24497587, Length=156, Percent_Identity=32.6923076923077, Blast_Score=68, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71989805, Length=166, Percent_Identity=30.1204819277108, Blast_Score=70, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71989822, Length=166, Percent_Identity=30.1204819277108, Blast_Score=70, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17508769, Length=139, Percent_Identity=30.9352517985612, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17534659, Length=161, Percent_Identity=31.6770186335404, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI62484298, Length=282, Percent_Identity=29.0780141843972, Blast_Score=78, Evalue=3e-14, Organism=Drosophila melanogaster, GI62484477, Length=230, Percent_Identity=29.5652173913043, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI116008008, Length=170, Percent_Identity=32.9411764705882, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI62473752, Length=167, Percent_Identity=26.9461077844311, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI17137448, Length=167, Percent_Identity=26.9461077844311, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR003660 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00672 HAMP [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 75232; Mature: 75100
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS50125 GUANYLATE_CYCLASES_2 ; PS00398 RECOMBINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATPGSSPTPAQRSEQLTVSIRFAVSALVLAAILLTAFGSSLLWWRTSEAISRQLASTI CCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHH NSQIAGAVRKEVTAIVGEAQAAHTAIRTLFLQNVLDTREADKREFVFLSQLQSQATISWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEE AFGWPDGSFFAAHKLGDQRLEMMEISLTDHPGQRRVDAYDVVPGDIEFTSRRFEPTSFKV EECCCCCCEEHHHHCCHHHHHEEEEEECCCCCCCCCCEEECCCCCCHHCCCCCCCCCEEE ADQPWFKQGLAADEPRWFSVDQHPVGRRPAIALAGPIDVYQERQGVLAIIVEHARIARFL CCCCHHHCCCCCCCCCEEECCCCCCCCCCCEEEECCHHHHHHCCCCEEHHHHHHHHHHHH AQLQVGQTGSAFILERDGAVVAAPDADADEEHAGRDRQPLLPVAQQAMRSAVEGDEAWRG HHHHCCCCCCEEEEECCCCEEECCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCHHHCC RVQSGDGAFEVARTPLPFPGWSLVTVIPEAEFLGPVDAALRRVIIGLGIGAVLAALASAA CCCCCCCCEEEECCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHH LARAVIAAPLGRVVAELRHVEAFALAQVRRHPSRLREIASLSGAIAEMAGGLSSFGKFIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHCCH ADLVRQLLRQGVDARPGGHLQELSVMFIDIAGFTGLSERMGDRVVPLLSRYLDLISTVIV HHHHHHHHHCCCCCCCCCCHHHHHEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHH DHGGTIDKFIGDAVMAFWGAPAAQPDHAVLCCRAALACRAAVEGSDLRDEDGQPLRIRIG CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE INSGRMLVGNIGSELRLNYTVIGDAVNVASRLEGANKTYGTTILIGEATARLSGDAFVAR CCCCCEEEECCCCCEEEEEEEECHHHHHHHHHCCCCCCCCCEEEEECCHHHCCCCHHHHH EIDRIAVYGREEGLAVHELVGLAEDVGAQQRSWIAHYARGLRDYRARDFEAAIVAFEAVV HHHHHEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHE ALKPGDRAAEVMIARCRTWAETQPDQHWRAVTALTSK EECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC >Mature Secondary Structure TATPGSSPTPAQRSEQLTVSIRFAVSALVLAAILLTAFGSSLLWWRTSEAISRQLASTI CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHH NSQIAGAVRKEVTAIVGEAQAAHTAIRTLFLQNVLDTREADKREFVFLSQLQSQATISWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEE AFGWPDGSFFAAHKLGDQRLEMMEISLTDHPGQRRVDAYDVVPGDIEFTSRRFEPTSFKV EECCCCCCEEHHHHCCHHHHHEEEEEECCCCCCCCCCEEECCCCCCHHCCCCCCCCCEEE ADQPWFKQGLAADEPRWFSVDQHPVGRRPAIALAGPIDVYQERQGVLAIIVEHARIARFL CCCCHHHCCCCCCCCCEEECCCCCCCCCCCEEEECCHHHHHHCCCCEEHHHHHHHHHHHH AQLQVGQTGSAFILERDGAVVAAPDADADEEHAGRDRQPLLPVAQQAMRSAVEGDEAWRG HHHHCCCCCCEEEEECCCCEEECCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCHHHCC RVQSGDGAFEVARTPLPFPGWSLVTVIPEAEFLGPVDAALRRVIIGLGIGAVLAALASAA CCCCCCCCEEEECCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHH LARAVIAAPLGRVVAELRHVEAFALAQVRRHPSRLREIASLSGAIAEMAGGLSSFGKFIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHCCH ADLVRQLLRQGVDARPGGHLQELSVMFIDIAGFTGLSERMGDRVVPLLSRYLDLISTVIV HHHHHHHHHCCCCCCCCCCHHHHHEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHH DHGGTIDKFIGDAVMAFWGAPAAQPDHAVLCCRAALACRAAVEGSDLRDEDGQPLRIRIG CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE INSGRMLVGNIGSELRLNYTVIGDAVNVASRLEGANKTYGTTILIGEATARLSGDAFVAR CCCCCEEEECCCCCEEEEEEEECHHHHHHHHHCCCCCCCCCEEEEECCHHHCCCCHHHHH EIDRIAVYGREEGLAVHELVGLAEDVGAQQRSWIAHYARGLRDYRARDFEAAIVAFEAVV HHHHHEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHE ALKPGDRAAEVMIARCRTWAETQPDQHWRAVTALTSK EECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11481430; 1970565 [H]