| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343760
Identifier: 146343760
GI number: 146343760
Start: 7309223
End: 7309945
Strand: Direct
Name: 146343760
Synonym: BRADO7007
Alternate gene names: NA
Gene position: 7309223-7309945 (Clockwise)
Preceding gene: 146343749
Following gene: 146343761
Centisome position: 98.02
GC content: 63.9
Gene sequence:
>723_bases TTGGACCCCAGCTTGCGTTCTCCGAACGGCTTCCTGTCGTCGCTTTCCGATGATGACTTCGAGCTGGTCCGCCCCTACCT GCGGACGGTCGATCTCGTGCAAGACTCCGTGCTTGCCGAGGCCGGGGAGAAGCTGCCTCGCATCTACTTCCCTCACCGCG GCGTCATCTCGCTCGTCGTCAATCTCGCGCGCGGCGAACGCGTGCAGGTCGCGATGATCGGACGGGACAGCTTCTTCGGC AGCATGTCTCTGCTCGCCGGCGGCGACCCGATCGTATTGAACAGCGCTGCCGTTCTCGTGCCGGGCTCGGCTTCCATCGT CGATATCGATCGGGTCCGGGCGGCCGCCGAGCAGAGTTCCACCTTCCGTTCGCAAATGCTGCGGCACGCACTCGCCGTTT ACGTGCAAAGCCAGCAGACGGCAGGTTGCAACGCCGCCCACACGGTCGAATCCCGGCTCGCGCGCTGCCTTCTGCAGACG CATGACCTCTCTGGCGGCAACAAGCTCTATATCACGCAGGAATCCCTGGCGCAGATGATCGGCGCACGGCGAAACAGCGT GTCACTGGTCGCGAGCACGCTGCAGCAGGCCGACTTCATCCATTACAGCCGGGGCCATATCGAGATCATGGACCTGGAAG GCCTGAAGAAGACGGCTTGCGAATGCTACGGCGCCGTCCGGGGACACTACGAAAAGCTCGTCCGCCCGCGCAGCCTGCCC TGA
Upstream 100 bases:
>100_bases TCCCTGTTATTTTTCTTGTCAGCAGGTGTGACGCAGTTCTATGGAACCGTGAGTGCATTGAGATCCGAGAGGCTGCGTTA CTGCAATGCAGGAGATGGCT
Downstream 100 bases:
>100_bases GCAGGGCTGCAACCCCGACGAGAGATTGCATCAGCTGCCTGCGGCGAGAGGCCCGTATAACTACGGGCCACGGCATGATC CGTGTCGTTGCCCAGGGCGG
Product: CRP/FNR family transcriptional regulator
Products: NA
Alternate protein names: CRP/FNR Family Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator-Related Protein; Regulatory Protein Crp; Transcriptional Regulator Protein; Transcriptional Regulator; Regulatory Subunit Of CAMP-Dependent Protein Kinases; Transcription Regulator Crp Family; Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; Two-Component Response Regulator Protein; Transcriptional Regulator CAP/Crp Family; Transcriptional Regulator Crp/Fnr Family Protein
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MDPSLRSPNGFLSSLSDDDFELVRPYLRTVDLVQDSVLAEAGEKLPRIYFPHRGVISLVVNLARGERVQVAMIGRDSFFG SMSLLAGGDPIVLNSAAVLVPGSASIVDIDRVRAAAEQSSTFRSQMLRHALAVYVQSQQTAGCNAAHTVESRLARCLLQT HDLSGGNKLYITQESLAQMIGARRNSVSLVASTLQQADFIHYSRGHIEIMDLEGLKKTACECYGAVRGHYEKLVRPRSLP
Sequences:
>Translated_240_residues MDPSLRSPNGFLSSLSDDDFELVRPYLRTVDLVQDSVLAEAGEKLPRIYFPHRGVISLVVNLARGERVQVAMIGRDSFFG SMSLLAGGDPIVLNSAAVLVPGSASIVDIDRVRAAAEQSSTFRSQMLRHALAVYVQSQQTAGCNAAHTVESRLARCLLQT HDLSGGNKLYITQESLAQMIGARRNSVSLVASTLQQADFIHYSRGHIEIMDLEGLKKTACECYGAVRGHYEKLVRPRSLP >Mature_240_residues MDPSLRSPNGFLSSLSDDDFELVRPYLRTVDLVQDSVLAEAGEKLPRIYFPHRGVISLVVNLARGERVQVAMIGRDSFFG SMSLLAGGDPIVLNSAAVLVPGSASIVDIDRVRAAAEQSSTFRSQMLRHALAVYVQSQQTAGCNAAHTVESRLARCLLQT HDLSGGNKLYITQESLAQMIGARRNSVSLVASTLQQADFIHYSRGHIEIMDLEGLKKTACECYGAVRGHYEKLVRPRSLP
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26213; Mature: 26213
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPSLRSPNGFLSSLSDDDFELVRPYLRTVDLVQDSVLAEAGEKLPRIYFPHRGVISLVV CCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHH NLARGERVQVAMIGRDSFFGSMSLLAGGDPIVLNSAAVLVPGSASIVDIDRVRAAAEQSS HHHCCCEEEEEEEECCCCCCCHHHHCCCCCEEEECCEEEECCCCCEEEHHHHHHHHHHHH TFRSQMLRHALAVYVQSQQTAGCNAAHTVESRLARCLLQTHDLSGGNKLYITQESLAQMI HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH GARRNSVSLVASTLQQADFIHYSRGHIEIMDLEGLKKTACECYGAVRGHYEKLVRPRSLP CCCCCHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDPSLRSPNGFLSSLSDDDFELVRPYLRTVDLVQDSVLAEAGEKLPRIYFPHRGVISLVV CCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHH NLARGERVQVAMIGRDSFFGSMSLLAGGDPIVLNSAAVLVPGSASIVDIDRVRAAAEQSS HHHCCCEEEEEEEECCCCCCCHHHHCCCCCEEEECCEEEECCCCCEEEHHHHHHHHHHHH TFRSQMLRHALAVYVQSQQTAGCNAAHTVESRLARCLLQTHDLSGGNKLYITQESLAQMI HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH GARRNSVSLVASTLQQADFIHYSRGHIEIMDLEGLKKTACECYGAVRGHYEKLVRPRSLP CCCCCHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA