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The map label for this gene is yrkP [H]

Identifier: 146343657

GI number: 146343657

Start: 7169865

End: 7170782

Strand: Direct

Name: yrkP [H]

Synonym: BRADO6899

Alternate gene names: 146343657

Gene position: 7169865-7170782 (Clockwise)

Preceding gene: 146343656

Following gene: 146343660

Centisome position: 96.15

GC content: 66.88

Gene sequence:

>918_bases
ATGAGCACTGACAACAAGAAGCGCGACGTCGCGCTGGTCGTGGACGACTCCCCGGAGACGCTGCGGTTGCTCACGGATGC
GCTGGATGGCGCCGGCATGACCGTGATGGTCGCGCTCGACGGCGCGGCCGCGATGCGCATCGTCGACCAGATTACGCCCG
ACATCATCCTGCTCGACGCCGTGATGCCCGGCATCGACGGCTTCGAGACCTGCCGCAAGCTCAAGCGCGAGGCCGGCCTC
TCCAACGTGCCCGTGATCTTCATGACCGGCCTCGCCGATACCGAGCATATCGTGCAGGGACTCGACGCCGGTGGCGTCGA
CTACGTCACCAAGCCGATCGCGGTCGAGGAGATGCTGGCGCGAATCCGCGTACACCTCGCCAATGCGCGCATGACCCAGA
GCGCGCGCGCCGCGCTCGACGTGTCCGGACGCTTCCTGCTCGCGGTCAACCGCGAGGGCCGGCTGATGTGGGCGACGCCG
CAGGCACAGAAGCTGCTGTCGGACAGTTTTGGATCCGCCGAGGATCTCGTCCTGCCTGACGGGCTGCGGCAATGGCTGGA
CCAGGCGCAGAAGGGCAAGGGCGCCGCCAAGGCGGCGGCGTCGATCCCCGACCATCCCGAGCTGCGCCTTTACTACATGG
GCGGCGCCGGCCCGAATGAATTCCTGCTCAGGCTCGCGAAGGAGTCATCCGGCGACCTGCCCAAGGAATTCTCCAGCGAG
TTCGGACTCACCACACGCGAGGGCGAGGTGCTGTCCTGGCTCTCCAAGGGCAAGACCAACCGCGACATCGCCCAGATCCT
GGGCCTGAGCCCGCGCACGGTCGACAAGCACCTGGAGCAGATCTATGCCAAGCTGGGTGTGGAGAACCGCACGGCGGCGG
CAGCCATCGCGACGGGATTGACGCGACGGGAGAGTTGA

Upstream 100 bases:

>100_bases
GCCTATCCGGAGCATGCCGATTTCGTCGCCCAGATGCGGATGCTGATCGACCGTTTCGATCTCGATCAGTACATGGCCAC
TCTGAAGACCCTGCACGCCT

Downstream 100 bases:

>100_bases
ACTCCAGCTGTCGTCCCGGGCAAGCCTGCCGACGCGCAGCGCCGGTGGGCGCCGACCCGGGACCCATACCGCGTGATCTC
TCGAGGCAGGCTGCACGTTG

Product: CheY/LuxR family two-component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSTDNKKRDVALVVDDSPETLRLLTDALDGAGMTVMVALDGAAAMRIVDQITPDIILLDAVMPGIDGFETCRKLKREAGL
SNVPVIFMTGLADTEHIVQGLDAGGVDYVTKPIAVEEMLARIRVHLANARMTQSARAALDVSGRFLLAVNREGRLMWATP
QAQKLLSDSFGSAEDLVLPDGLRQWLDQAQKGKGAAKAAASIPDHPELRLYYMGGAGPNEFLLRLAKESSGDLPKEFSSE
FGLTTREGEVLSWLSKGKTNRDIAQILGLSPRTVDKHLEQIYAKLGVENRTAAAAIATGLTRRES

Sequences:

>Translated_305_residues
MSTDNKKRDVALVVDDSPETLRLLTDALDGAGMTVMVALDGAAAMRIVDQITPDIILLDAVMPGIDGFETCRKLKREAGL
SNVPVIFMTGLADTEHIVQGLDAGGVDYVTKPIAVEEMLARIRVHLANARMTQSARAALDVSGRFLLAVNREGRLMWATP
QAQKLLSDSFGSAEDLVLPDGLRQWLDQAQKGKGAAKAAASIPDHPELRLYYMGGAGPNEFLLRLAKESSGDLPKEFSSE
FGLTTREGEVLSWLSKGKTNRDIAQILGLSPRTVDKHLEQIYAKLGVENRTAAAAIATGLTRRES
>Mature_304_residues
STDNKKRDVALVVDDSPETLRLLTDALDGAGMTVMVALDGAAAMRIVDQITPDIILLDAVMPGIDGFETCRKLKREAGLS
NVPVIFMTGLADTEHIVQGLDAGGVDYVTKPIAVEEMLARIRVHLANARMTQSARAALDVSGRFLLAVNREGRLMWATPQ
AQKLLSDSFGSAEDLVLPDGLRQWLDQAQKGKGAAKAAASIPDHPELRLYYMGGAGPNEFLLRLAKESSGDLPKEFSSEF
GLTTREGEVLSWLSKGKTNRDIAQILGLSPRTVDKHLEQIYAKLGVENRTAAAAIATGLTRRES

Specific function: Member of the two-component regulatory system yrkQ/yrkP [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=162, Percent_Identity=30.8641975308642, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786599, Length=112, Percent_Identity=34.8214285714286, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790299, Length=130, Percent_Identity=31.5384615384615, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=33.6448598130841, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1786784, Length=115, Percent_Identity=34.7826086956522, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1786911, Length=242, Percent_Identity=28.5123966942149, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87082012, Length=132, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1790860, Length=141, Percent_Identity=29.7872340425532, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790863, Length=112, Percent_Identity=31.25, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1787229, Length=112, Percent_Identity=33.9285714285714, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1789809, Length=115, Percent_Identity=32.1739130434783, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 32923; Mature: 32792

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2 ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDNKKRDVALVVDDSPETLRLLTDALDGAGMTVMVALDGAAAMRIVDQITPDIILLDA
CCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEEH
VMPGIDGFETCRKLKREAGLSNVPVIFMTGLADTEHIVQGLDAGGVDYVTKPIAVEEMLA
HCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCCCCHHHHCCCHHHHHHHH
RIRVHLANARMTQSARAALDVSGRFLLAVNREGRLMWATPQAQKLLSDSFGSAEDLVLPD
HHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCEEEECHHHHHHHHHCCCCCCCCCCCH
GLRQWLDQAQKGKGAAKAAASIPDHPELRLYYMGGAGPNEFLLRLAKESSGDLPKEFSSE
HHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHH
FGLTTREGEVLSWLSKGKTNRDIAQILGLSPRTVDKHLEQIYAKLGVENRTAAAAIATGL
CCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
TRRES
HHCCC
>Mature Secondary Structure 
STDNKKRDVALVVDDSPETLRLLTDALDGAGMTVMVALDGAAAMRIVDQITPDIILLDA
CCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEEH
VMPGIDGFETCRKLKREAGLSNVPVIFMTGLADTEHIVQGLDAGGVDYVTKPIAVEEMLA
HCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCCCCHHHHCCCHHHHHHHH
RIRVHLANARMTQSARAALDVSGRFLLAVNREGRLMWATPQAQKLLSDSFGSAEDLVLPD
HHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCEEEECHHHHHHHHHCCCCCCCCCCCH
GLRQWLDQAQKGKGAAKAAASIPDHPELRLYYMGGAGPNEFLLRLAKESSGDLPKEFSSE
HHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHH
FGLTTREGEVLSWLSKGKTNRDIAQILGLSPRTVDKHLEQIYAKLGVENRTAAAAIATGL
CCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
TRRES
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]