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The map label for this gene is 146343515

Identifier: 146343515

GI number: 146343515

Start: 7009297

End: 7009890

Strand: Reverse

Name: 146343515

Synonym: BRADO6747

Alternate gene names: NA

Gene position: 7009890-7009297 (Counterclockwise)

Preceding gene: 146343516

Following gene: 146343514

Centisome position: 94.01

GC content: 65.15

Gene sequence:

>594_bases
ATGCCGTCCAATGCCACCCGTCCGCTGGTGATCGTCGGAGCCTTCGCGGCCAGCCTCGTGGTCGGCCTCTCGCTGATGTT
CCTGGTCATGGGCGGCGGCCGCAACATCGCCGCGCCGGCCGCGATCGGCGGCCCGTTCCAGCTCACCGACCAGACCGGCG
CCGTCGTCACCGAGAAGAGCCTCGAGGGCCGGCCGACCCTGATCTTCTTCGGCTTCACCCATTGCCCGGACGTCTGCCCG
ACCTCGCTGTTCGAGATCTCCGAGGTGCTGCGCGCGATGGGCAAGGACGGCGACGGCGTCAATGCCTATTTCATCTCGGT
CGATCCCGAGCGCGACAATCCGGCGACGATGAAGGACTATCTCTCCAGCTTCGATCCGCGTCTCAAGGGCCTGACCGGCG
ATCCCGAGGTGCTGGCCAAGGTGCTCACCGAGTACCGGGTCTACGCCAAGAAGGTTCCGCTCAAGGACGGCGATTACACC
ATGGACCACACCGCGCTGGTCTATCTGATGGACCGCAACGGCCGCTTCGTCGCGCCGTTCAATTTGAAGCGGACGCCCGA
GGAAGCCGCGGCGGACCTGAAGAAATACCTCTAA

Upstream 100 bases:

>100_bases
GGCGCCGCAATGCTGTGGGCGACGTATGGGACCGCGGTGTTCTTCGAGATGATCGCCGCCGGTTTCAGCGCCTGCTTCTG
AGAGAGAGAAGGAATACGGC

Downstream 100 bases:

>100_bases
GCGCATTAACGCTGAAGCCCGAGGCAGTGGGCCGCTGTGCCCATTCCAGCCTCGAATTTGCGCCGGGATGGTCTATAAGG
CGCGCTGACCCTCGGGACCG

Product: putative electron transport protein (SCO1/SenC/PrrC-like)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MPSNATRPLVIVGAFAASLVVGLSLMFLVMGGGRNIAAPAAIGGPFQLTDQTGAVVTEKSLEGRPTLIFFGFTHCPDVCP
TSLFEISEVLRAMGKDGDGVNAYFISVDPERDNPATMKDYLSSFDPRLKGLTGDPEVLAKVLTEYRVYAKKVPLKDGDYT
MDHTALVYLMDRNGRFVAPFNLKRTPEEAAADLKKYL

Sequences:

>Translated_197_residues
MPSNATRPLVIVGAFAASLVVGLSLMFLVMGGGRNIAAPAAIGGPFQLTDQTGAVVTEKSLEGRPTLIFFGFTHCPDVCP
TSLFEISEVLRAMGKDGDGVNAYFISVDPERDNPATMKDYLSSFDPRLKGLTGDPEVLAKVLTEYRVYAKKVPLKDGDYT
MDHTALVYLMDRNGRFVAPFNLKRTPEEAAADLKKYL
>Mature_196_residues
PSNATRPLVIVGAFAASLVVGLSLMFLVMGGGRNIAAPAAIGGPFQLTDQTGAVVTEKSLEGRPTLIFFGFTHCPDVCPT
SLFEISEVLRAMGKDGDGVNAYFISVDPERDNPATMKDYLSSFDPRLKGLTGDPEVLAKVLTEYRVYAKKVPLKDGDYTM
DHTALVYLMDRNGRFVAPFNLKRTPEEAAADLKKYL

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI4759068, Length=215, Percent_Identity=34.8837209302326, Blast_Score=119, Evalue=1e-27,
Organism=Homo sapiens, GI281182727, Length=162, Percent_Identity=36.4197530864198, Blast_Score=116, Evalue=1e-26,
Organism=Homo sapiens, GI281182722, Length=162, Percent_Identity=36.4197530864198, Blast_Score=116, Evalue=1e-26,
Organism=Homo sapiens, GI281182716, Length=162, Percent_Identity=36.4197530864198, Blast_Score=116, Evalue=1e-26,
Organism=Homo sapiens, GI153791313, Length=162, Percent_Identity=36.4197530864198, Blast_Score=116, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17531419, Length=162, Percent_Identity=37.6543209876543, Blast_Score=119, Evalue=8e-28,
Organism=Saccharomyces cerevisiae, GI6319511, Length=140, Percent_Identity=43.5714285714286, Blast_Score=117, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6319498, Length=140, Percent_Identity=40, Blast_Score=115, Evalue=4e-27,
Organism=Drosophila melanogaster, GI19920710, Length=200, Percent_Identity=36, Blast_Score=127, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 21383; Mature: 21252

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSNATRPLVIVGAFAASLVVGLSLMFLVMGGGRNIAAPAAIGGPFQLTDQTGAVVTEKS
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECC
LEGRPTLIFFGFTHCPDVCPTSLFEISEVLRAMGKDGDGVNAYFISVDPERDNPATMKDY
CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHH
LSSFDPRLKGLTGDPEVLAKVLTEYRVYAKKVPLKDGDYTMDHTALVYLMDRNGRFVAPF
HHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEECCCCCEEECC
NLKRTPEEAAADLKKYL
CCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
PSNATRPLVIVGAFAASLVVGLSLMFLVMGGGRNIAAPAAIGGPFQLTDQTGAVVTEKS
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECC
LEGRPTLIFFGFTHCPDVCPTSLFEISEVLRAMGKDGDGVNAYFISVDPERDNPATMKDY
CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHH
LSSFDPRLKGLTGDPEVLAKVLTEYRVYAKKVPLKDGDYTMDHTALVYLMDRNGRFVAPF
HHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEECCCCCEEECC
NLKRTPEEAAADLKKYL
CCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA