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The map label for this gene is pcaC [H]

Identifier: 146343467

GI number: 146343467

Start: 6958733

End: 6959065

Strand: Reverse

Name: pcaC [H]

Synonym: BRADO6697

Alternate gene names: 146343467

Gene position: 6959065-6958733 (Counterclockwise)

Preceding gene: 146343468

Following gene: 146343464

Centisome position: 93.33

GC content: 65.17

Gene sequence:

>333_bases
GTGATCGCGGCGCTCGCGGACATCGCGCCGGATTTCGCCACCTACGTCATCGAGTTTCCGTTCGGCGACATCTACACACG
TCCCGGCCTCGATCTGCGCAGTCGCGAGATCGCGACCATCGCGGCGCTGACCGCGCTCGGCAATGCCAGCCCGCAGCTGA
AAGTTCATCTCCAGGCGGGCCTCAATGTCGGCCTCAGCCGGGAGGAGATCACCGAGGTCATCATGCAGATGGCGGTCTAT
GCCGGCTTTCCCGCCGCGCTCAACGGCCTGTTCGCCGCCAAGGCCGTGTTCGCCGAGGCCGATGCAAAGGCAAAAGAGGC
CTCACCGGTCTGA

Upstream 100 bases:

>100_bases
GATGCCGGCGGGCGGACCAGCCGGCACCATCAACGATCAGGACCGGCTGGCGCGAGGCCGGCGCGCGCTCGATAGTATCG
ACGGGGAGGCCGGTCACAAC

Downstream 100 bases:

>100_bases
GCGACGATCACGGCTCGTAGCCCGCATGAGCGGAGCGACATGCGGGGCCGGTGGATGATCATAGGGGAGCTCACGTTTGT
TCTTCTTACGAATTCCAGGC

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MIAALADIAPDFATYVIEFPFGDIYTRPGLDLRSREIATIAALTALGNASPQLKVHLQAGLNVGLSREEITEVIMQMAVY
AGFPAALNGLFAAKAVFAEADAKAKEASPV

Sequences:

>Translated_110_residues
MIAALADIAPDFATYVIEFPFGDIYTRPGLDLRSREIATIAALTALGNASPQLKVHLQAGLNVGLSREEITEVIMQMAVY
AGFPAALNGLFAAKAVFAEADAKAKEASPV
>Mature_110_residues
MIAALADIAPDFATYVIEFPFGDIYTRPGLDLRSREIATIAALTALGNASPQLKVHLQAGLNVGLSREEITEVIMQMAVY
AGFPAALNGLFAAKAVFAEADAKAKEASPV

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 11579; Mature: 11579

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAALADIAPDFATYVIEFPFGDIYTRPGLDLRSREIATIAALTALGNASPQLKVHLQAG
CCCCHHHHCCCHHHEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECC
LNVGLSREEITEVIMQMAVYAGFPAALNGLFAAKAVFAEADAKAKEASPV
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIAALADIAPDFATYVIEFPFGDIYTRPGLDLRSREIATIAALTALGNASPQLKVHLQAG
CCCCHHHHCCCHHHEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECC
LNVGLSREEITEVIMQMAVYAGFPAALNGLFAAKAVFAEADAKAKEASPV
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]