Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146343454
Identifier: 146343454
GI number: 146343454
Start: 6947708
End: 6948292
Strand: Reverse
Name: 146343454
Synonym: BRADO6683
Alternate gene names: NA
Gene position: 6948292-6947708 (Counterclockwise)
Preceding gene: 146343455
Following gene: 146343453
Centisome position: 93.18
GC content: 65.81
Gene sequence:
>585_bases ATGAGTGTGACGAAGACGAGTGTCACCAAGCAGCCCTGCCGGCATCCCCTCGTCGCGCTGCTCGCATTGGGCTGTCTGGG AGGCGAAGCCTTGGCCGCCGAGGACGCCGCGCCCGACGGCGACAAGGGGCGCTACACGATGTCGACGACAGCGGACGGCG TGATCCGGCTCGACACACGCACCGGTGCGGTCTCGACCTGCAACAACAGCGCCGGGTCCGGCTGGGCCTGTTACGCCGTG CCCGACGAGCGCGCCGCGCTCGATGCCGAGATCGGCCGGCTCCAGGCGGAGAACGAGAAGCTCAAGGCGCAGCTCGCCTC GCGCGACCAGAGCATCTCCGGCAAGATCGATGAGCCGTTGCCGAAGGACCAGGCGCTGCCCAAATCCGATCAACTGAAGA AGTCCGAGTCCAAAGCCGGTGAAAAGCCGGGGGAGTCGAAATCCGCGGATGGAACGCGCAAGCTGGAAATTCCGTTGCCC AGCGACCAGGACATGGATCGCATGATGGGTTTCCTGGAGCAGGCCTGGCGCCGGCTGCTCGACATGGCGAACCGGGTGCA GAAAGACGTCTCCGGCAGGATCTGA
Upstream 100 bases:
>100_bases GCGGCCCGTGACAGGTGATCGCACCTGAGGCCACGTCATGGCCGCGACACAATGTCGGCGTGCATGACGGCGGTTGCGAC TGCGCCCTGGAGAGCCCGCC
Downstream 100 bases:
>100_bases CGGGGCGGCGAGGAGGCGGAGCAGATGTCCGTCAGATCGATATCGCGCACGGCGCCTTCGACCGTCGCCGTCAACATGGT CGTCACGTCGGCATTGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSVTKTSVTKQPCRHPLVALLALGCLGGEALAAEDAAPDGDKGRYTMSTTADGVIRLDTRTGAVSTCNNSAGSGWACYAV PDERAALDAEIGRLQAENEKLKAQLASRDQSISGKIDEPLPKDQALPKSDQLKKSESKAGEKPGESKSADGTRKLEIPLP SDQDMDRMMGFLEQAWRRLLDMANRVQKDVSGRI
Sequences:
>Translated_194_residues MSVTKTSVTKQPCRHPLVALLALGCLGGEALAAEDAAPDGDKGRYTMSTTADGVIRLDTRTGAVSTCNNSAGSGWACYAV PDERAALDAEIGRLQAENEKLKAQLASRDQSISGKIDEPLPKDQALPKSDQLKKSESKAGEKPGESKSADGTRKLEIPLP SDQDMDRMMGFLEQAWRRLLDMANRVQKDVSGRI >Mature_193_residues SVTKTSVTKQPCRHPLVALLALGCLGGEALAAEDAAPDGDKGRYTMSTTADGVIRLDTRTGAVSTCNNSAGSGWACYAVP DERAALDAEIGRLQAENEKLKAQLASRDQSISGKIDEPLPKDQALPKSDQLKKSESKAGEKPGESKSADGTRKLEIPLPS DQDMDRMMGFLEQAWRRLLDMANRVQKDVSGRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20815; Mature: 20683
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTKTSVTKQPCRHPLVALLALGCLGGEALAAEDAAPDGDKGRYTMSTTADGVIRLDTR CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCEEEECCCCCEEEEECC TGAVSTCNNSAGSGWACYAVPDERAALDAEIGRLQAENEKLKAQLASRDQSISGKIDEPL CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PKDQALPKSDQLKKSESKAGEKPGESKSADGTRKLEIPLPSDQDMDRMMGFLEQAWRRLL CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH DMANRVQKDVSGRI HHHHHHHHHHCCCC >Mature Secondary Structure SVTKTSVTKQPCRHPLVALLALGCLGGEALAAEDAAPDGDKGRYTMSTTADGVIRLDTR CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCEEEECCCCCEEEEECC TGAVSTCNNSAGSGWACYAVPDERAALDAEIGRLQAENEKLKAQLASRDQSISGKIDEPL CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PKDQALPKSDQLKKSESKAGEKPGESKSADGTRKLEIPLPSDQDMDRMMGFLEQAWRRLL CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH DMANRVQKDVSGRI HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA