Click here to switch to the map view.

The map label for this gene is araB [H]

Identifier: 146343386

GI number: 146343386

Start: 6865929

End: 6867566

Strand: Reverse

Name: araB [H]

Synonym: BRADO6615

Alternate gene names: 146343386

Gene position: 6867566-6865929 (Counterclockwise)

Preceding gene: 146343387

Following gene: 146343385

Centisome position: 92.1

GC content: 68.56

Gene sequence:

>1638_bases
ATGGGCCAGGCTTTTATCGGTGTCGATGTCGGCACGTCCAGCACGCGCGCCGGAATTTTCGACGAGAACGGCCGCCTGCT
CGCTGCGGCGCGGCACCCGATCCAGACCTGGCATGAGGCCGGGGACGTCGTCGAGCAGTCGTCGGATAATATCTGGCGAG
CCTGCTGCGCCGCGGTCAAAGCCGCGCTGTCGGAGGCCGCCATTTCGCCGGAGCTGATCAAGGGGATCGGCTTCGACGCG
ACCTGTTCGCTGGTGGTGCTCGACCCGCGCGGCGCGCCGGTCACGGTGAGCGGCTCCGGCGACGCGGCGCGCAACGTCAT
CGTCTGGATGGATCACCGCGCGCTCGCCGAGGCGCGCGACATCAACGCGACCGGAGACGACGTGCTGCGCTATGTCGGCG
GCTCGATCTCGCCGGAGATGGAGATGCCGAAGCTGCTCTGGCTGAAGCGACACCTCCGAACGAGCTTCGACGCGGCCGGG
CACTTCTTCGATCTCGCCGATTTCCTCACCTGGCGCGCCACCGGCTCATTGGCACGCTCGATGTGCACCGTCACCTGCAA
GTGGAATTACCTCGCGCATGAGACGCGCTGGAGCGCGGACTACATCCGCCGCATCGGGCTGGAGGACTTCGTCAGCGAGG
ACTACGCCCGCATTGGCACCAAGATCGTCGCGCCCGGCACGTCGCTCGGCCACGGGTTGTCGGCGCAGGCGGCGGGTGAG
CTTGCTCTTGTGGCAGGAACGCCGGTCGGCGCGGCGCTGATCGATGCCCATGCCGGCGGCATCGGCGCGATCGGCGGCCG
CGCGGCTGACAGCGGCGAGGTCGATGTCTGCGATCGGCTCGCCTACATCATGGGGACCTCGGCCTGCATCATGGCGACCA
CGCGAGCGCCGTCCTTCGTACCCGGCGTGTGGGGTCCGTATTATCAGGGCATGGTTCCTGGGTTCTGGCTCAACGAGGGC
GGGCAGTCCGCCGCGGGCGCCGCGATCGATCATCTGCTGCGCTCACATCCGGCCGTGGCCGAGGCGACCGCCGCGGCACG
CGCGGAAGGGCTCGATCTGATCAGCTTCCTCGAAAAGCGGATCATGGCGCGAACGCCGAGCGTCGGTGCGGCAGCGCTGC
TCGCGCGTGAGGTGCACATCCTACCCGAGTTTCTCGGCAACCGGTCGCCCTATGCCGATCCGGCCTCGCGCGCCGTCATC
GCCGGCCTCGATCTCGATGCCGATATCGGTGCGATGGAGCGGCTGTTCGTCGCAGGGCTGTGTGGTCTGGCTTACGGCCT
CGCGGACGTGATCGACGCCTTCGCCGCCAATGGCGTCACCAGCCGTACGCTGGTGATGGCGGGCGGTGCATCACGGAGCC
CGCTGGTGCGTCAGATCATGGCGGACACAACCGGCCTGACCGTGGCTCTGCCGGGCACCCAGGAGCCGGTGCTGCTCGGC
GCAGCCATGCTCGGCGCCGTGGCCAGCGGCGTCTTCCGCTCGATCGGCGAGACGATGGCGTCGATGTCGACGCTCGGCCG
TCTCAGCGAGCCGACCGAGCCTGGGGTCGCCGACTTCCATCTCCGCAAGCGCCGCATCCACGGCATGCTACGGACGCTTG
ATCGCGACAGCCGTTCCGTGATGCATGGGGCCGGGTGA

Upstream 100 bases:

>100_bases
TGGCTTCGGAGGCGGCAAGTTTGATGACCGGCAGCGTCGTCGTTGTCGATGGCGGCTACACTTGCTGGTAAGCTCGCGTC
AAAATTGACGGGAGCGAAAC

Downstream 100 bases:

>100_bases
GGAGGCGGATCATGATCCTGAGCTGCGGCGATGCTTTGATCGATTTCGTCCCGGCCAAACTGGCCGACGGACGTGACGTG
CTGCGGCCGGTCGTCGGCGG

Product: putative sugar kinase (ribulo-/ribitol kinase)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 544

Protein sequence:

>545_residues
MGQAFIGVDVGTSSTRAGIFDENGRLLAAARHPIQTWHEAGDVVEQSSDNIWRACCAAVKAALSEAAISPELIKGIGFDA
TCSLVVLDPRGAPVTVSGSGDAARNVIVWMDHRALAEARDINATGDDVLRYVGGSISPEMEMPKLLWLKRHLRTSFDAAG
HFFDLADFLTWRATGSLARSMCTVTCKWNYLAHETRWSADYIRRIGLEDFVSEDYARIGTKIVAPGTSLGHGLSAQAAGE
LALVAGTPVGAALIDAHAGGIGAIGGRAADSGEVDVCDRLAYIMGTSACIMATTRAPSFVPGVWGPYYQGMVPGFWLNEG
GQSAAGAAIDHLLRSHPAVAEATAAARAEGLDLISFLEKRIMARTPSVGAAALLAREVHILPEFLGNRSPYADPASRAVI
AGLDLDADIGAMERLFVAGLCGLAYGLADVIDAFAANGVTSRTLVMAGGASRSPLVRQIMADTTGLTVALPGTQEPVLLG
AAMLGAVASGVFRSIGETMASMSTLGRLSEPTEPGVADFHLRKRRIHGMLRTLDRDSRSVMHGAG

Sequences:

>Translated_545_residues
MGQAFIGVDVGTSSTRAGIFDENGRLLAAARHPIQTWHEAGDVVEQSSDNIWRACCAAVKAALSEAAISPELIKGIGFDA
TCSLVVLDPRGAPVTVSGSGDAARNVIVWMDHRALAEARDINATGDDVLRYVGGSISPEMEMPKLLWLKRHLRTSFDAAG
HFFDLADFLTWRATGSLARSMCTVTCKWNYLAHETRWSADYIRRIGLEDFVSEDYARIGTKIVAPGTSLGHGLSAQAAGE
LALVAGTPVGAALIDAHAGGIGAIGGRAADSGEVDVCDRLAYIMGTSACIMATTRAPSFVPGVWGPYYQGMVPGFWLNEG
GQSAAGAAIDHLLRSHPAVAEATAAARAEGLDLISFLEKRIMARTPSVGAAALLAREVHILPEFLGNRSPYADPASRAVI
AGLDLDADIGAMERLFVAGLCGLAYGLADVIDAFAANGVTSRTLVMAGGASRSPLVRQIMADTTGLTVALPGTQEPVLLG
AAMLGAVASGVFRSIGETMASMSTLGRLSEPTEPGVADFHLRKRRIHGMLRTLDRDSRSVMHGAG
>Mature_544_residues
GQAFIGVDVGTSSTRAGIFDENGRLLAAARHPIQTWHEAGDVVEQSSDNIWRACCAAVKAALSEAAISPELIKGIGFDAT
CSLVVLDPRGAPVTVSGSGDAARNVIVWMDHRALAEARDINATGDDVLRYVGGSISPEMEMPKLLWLKRHLRTSFDAAGH
FFDLADFLTWRATGSLARSMCTVTCKWNYLAHETRWSADYIRRIGLEDFVSEDYARIGTKIVAPGTSLGHGLSAQAAGEL
ALVAGTPVGAALIDAHAGGIGAIGGRAADSGEVDVCDRLAYIMGTSACIMATTRAPSFVPGVWGPYYQGMVPGFWLNEGG
QSAAGAAIDHLLRSHPAVAEATAAARAEGLDLISFLEKRIMARTPSVGAAALLAREVHILPEFLGNRSPYADPASRAVIA
GLDLDADIGAMERLFVAGLCGLAYGLADVIDAFAANGVTSRTLVMAGGASRSPLVRQIMADTTGLTVALPGTQEPVLLGA
AMLGAVASGVFRSIGETMASMSTLGRLSEPTEPGVADFHLRKRRIHGMLRTLDRDSRSVMHGAG

Specific function: Unknown

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulokinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=545, Percent_Identity=44.954128440367, Blast_Score=473, Evalue=1e-133,
Organism=Homo sapiens, GI164663830, Length=569, Percent_Identity=43.585237258348, Blast_Score=461, Evalue=1e-130,
Organism=Escherichia coli, GI1787789, Length=528, Percent_Identity=26.3257575757576, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1790005, Length=550, Percent_Identity=22.5454545454545, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1786249, Length=573, Percent_Identity=23.9092495636998, Blast_Score=79, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6320314, Length=515, Percent_Identity=35.3398058252427, Blast_Score=337, Evalue=3e-93,
Organism=Saccharomyces cerevisiae, GI6324080, Length=485, Percent_Identity=26.1855670103093, Blast_Score=136, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24657106, Length=549, Percent_Identity=43.8979963570128, Blast_Score=444, Evalue=1e-124,
Organism=Drosophila melanogaster, GI24657102, Length=549, Percent_Identity=43.8979963570128, Blast_Score=444, Evalue=1e-124,
Organism=Drosophila melanogaster, GI21356323, Length=441, Percent_Identity=42.6303854875283, Blast_Score=333, Evalue=1e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR005929 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.16 [H]

Molecular weight: Translated: 57121; Mature: 56990

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQAFIGVDVGTSSTRAGIFDENGRLLAAARHPIQTWHEAGDVVEQSSDNIWRACCAAVK
CCCEEEEEECCCCCCCCCEECCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AALSEAAISPELIKGIGFDATCSLVVLDPRGAPVTVSGSGDAARNVIVWMDHRALAEARD
HHHHHHCCCHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCEEEEECCHHHHHHHC
INATGDDVLRYVGGSISPEMEMPKLLWLKRHLRTSFDAAGHFFDLADFLTWRATGSLARS
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
MCTVTCKWNYLAHETRWSADYIRRIGLEDFVSEDYARIGTKIVAPGTSLGHGLSAQAAGE
HEEEEEEECEEHHHCCCCHHHHHHCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCC
LALVAGTPVGAALIDAHAGGIGAIGGRAADSGEVDVCDRLAYIMGTSACIMATTRAPSFV
EEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEEECCCCCCC
PGVWGPYYQGMVPGFWLNEGGQSAAGAAIDHLLRSHPAVAEATAAARAEGLDLISFLEKR
CCCCCHHHHCCCCCCEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH
IMARTPSVGAAALLAREVHILPEFLGNRSPYADPASRAVIAGLDLDADIGAMERLFVAGL
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
CGLAYGLADVIDAFAANGVTSRTLVMAGGASRSPLVRQIMADTTGLTVALPGTQEPVLLG
HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHH
AAMLGAVASGVFRSIGETMASMSTLGRLSEPTEPGVADFHLRKRRIHGMLRTLDRDSRSV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
MHGAG
HCCCC
>Mature Secondary Structure 
GQAFIGVDVGTSSTRAGIFDENGRLLAAARHPIQTWHEAGDVVEQSSDNIWRACCAAVK
CCEEEEEECCCCCCCCCEECCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AALSEAAISPELIKGIGFDATCSLVVLDPRGAPVTVSGSGDAARNVIVWMDHRALAEARD
HHHHHHCCCHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCEEEEECCHHHHHHHC
INATGDDVLRYVGGSISPEMEMPKLLWLKRHLRTSFDAAGHFFDLADFLTWRATGSLARS
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
MCTVTCKWNYLAHETRWSADYIRRIGLEDFVSEDYARIGTKIVAPGTSLGHGLSAQAAGE
HEEEEEEECEEHHHCCCCHHHHHHCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCC
LALVAGTPVGAALIDAHAGGIGAIGGRAADSGEVDVCDRLAYIMGTSACIMATTRAPSFV
EEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEEECCCCCCC
PGVWGPYYQGMVPGFWLNEGGQSAAGAAIDHLLRSHPAVAEATAAARAEGLDLISFLEKR
CCCCCHHHHCCCCCCEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH
IMARTPSVGAAALLAREVHILPEFLGNRSPYADPASRAVIAGLDLDADIGAMERLFVAGL
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
CGLAYGLADVIDAFAANGVTSRTLVMAGGASRSPLVRQIMADTTGLTVALPGTQEPVLLG
HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHH
AAMLGAVASGVFRSIGETMASMSTLGRLSEPTEPGVADFHLRKRRIHGMLRTLDRDSRSV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
MHGAG
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA