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The map label for this gene is crtI [H]

Identifier: 146343286

GI number: 146343286

Start: 6755075

End: 6756595

Strand: Reverse

Name: crtI [H]

Synonym: BRADO6507

Alternate gene names: 146343286

Gene position: 6756595-6755075 (Counterclockwise)

Preceding gene: 146343287

Following gene: 146343285

Centisome position: 90.61

GC content: 65.29

Gene sequence:

>1521_bases
ATGAGTCAAGAGATGCAGAACGCCAAGACAGCAGTGGTGATCGGTTCGGGATTTGGTGGGCTTTCGCTCGCCATACGCCT
GCAATCGGCCGGGATCGCGACAACGCTCGTCGAGAAGCGCGACAAGTTCGGCGGCCGCGCCTATGTCTACGAGCAGGACG
GCTTCACCTTCGACGCCGGGCCCACTGTCATCACCGATCCGACCTGCCTGCAGGAGCTGTTCGCGCTCTCGGGGCGCAAG
CTCGAGAACTATGTCGAGCTGATGCCGGTCTCCCCATTCTATCAGCTGCGCTGGGAGGACGGCGCCACTTTCGACTACGT
CAACGACCAGGCCGAGCTGGAGCGCCAGATCGCGGCGTTCTGTCCGGCTGATGTGGACGGCTATCGGCGCTTCCGGTCGT
ATAGCGAGCGCCTGCTGGAGGAGGGCTACGTCAAGCTCGGCCACGTGCCGTTCCCGGATTTCCGGAGCATGGTGCGTGTG
GCGCCGCAGCTGGTGGCGCTGCAGAGCTATCGCAGCGTCTATAGCAAGGTGTCGCAATACGTCTCCGACGAGCATCTGCG
GCAGGCCTTCAGCTTCCACTCGCTGCTGGTCGGCGGCAATCCGTTCGCGACGTCCTCGATCTACGCGCTGATCCATGCGC
TGGAGCGCCGCTGGGGAGTCTGGTTCCCGCGCGGCGGCACCGGCGCGCTCATCAACAAGGGGCTCGTCCAGCTGTTCAAG
GATCTCGGCGGCGAGGTGACGCTGTCGACCAGCGTGAGCCGGATCGAGACGGCGAACGGGCGGGTCAGTGCCGTGGTCGC
CGAGGACGGCCGTCGGTTCGCCGCCGACATCGTCGCCAGCAACGCCGACGTCGTTCATACCTACCGCGATCTCCTGAAGG
ACGAGCCGCTGGCGCGGCCGACGGCGCAATCTTTGATGCGCAAGCGCTTCAGCATGTCGCTGTTCGTGATCTATTTCGGC
CTGCGCCGCGAGCATCCGGAGCTCAAGCACCACATCATTCTGTTCGGCCGGCGCTACCGCGAGCTGATCAACGAGATCTT
CAAGGGGCCCGCGTTGCCTGAGGATTTCTCGCTGTATCTGCACGCGCCGAGCGTGACCGATCCGTCGCTCGCGCCACAAG
GCTGCAGCACCTATTACGTGCTCTCGCCGGTGCCGCATCTCGCCGCCGCACCGATCGACTGGAGCGTGGAGGGCCCGCGC
TATCGCGACCGCATCCTCGACTATCTCGAGGCGCGCATTCTGCCGGGGCTGAAGTCGGACCTCGCCACCTGCCGCATCTT
CACGCCGCAGGATTTCAACACCGAGCTGAATGCGCATCTCGGCTCCGCGTTCTCGCTGGAGCCGATCCTGACGCAGAGCG
CGTATTTCCGCGCCCACAACGCGGACGACAAGATCAAGGGGCTGTATCTCGTCGGCGCCGGCACCCATCCGGGCGCCGGC
ATTCCCGGCGTCGTCGGCTCGGCCAAGGCGACCGCGCGAGTCATCCTCGAGGACCAGCGCGAACTCGCGGAGGCGCAATG
A

Upstream 100 bases:

>100_bases
AGGACAAGCTGCGCGTCTTCATGCATATGCTGATGAAGCCGCCGATCCCGATCTCGTCCGCGCTCGCCTGCCTGCCTGAG
GCGAGCGCCTTCAAGACCCC

Downstream 100 bases:

>100_bases
CGCTGCGCGACAATGACCATCTGGCGCGGCTGAGCGAAGCCGTCATCCGCAACGGCTCGAAGAGTTTCGCAGCCGCATCC
AAGCTGTTCGATTCCCGCAC

Product: phytoene dehydrogenase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MSQEMQNAKTAVVIGSGFGGLSLAIRLQSAGIATTLVEKRDKFGGRAYVYEQDGFTFDAGPTVITDPTCLQELFALSGRK
LENYVELMPVSPFYQLRWEDGATFDYVNDQAELERQIAAFCPADVDGYRRFRSYSERLLEEGYVKLGHVPFPDFRSMVRV
APQLVALQSYRSVYSKVSQYVSDEHLRQAFSFHSLLVGGNPFATSSIYALIHALERRWGVWFPRGGTGALINKGLVQLFK
DLGGEVTLSTSVSRIETANGRVSAVVAEDGRRFAADIVASNADVVHTYRDLLKDEPLARPTAQSLMRKRFSMSLFVIYFG
LRREHPELKHHIILFGRRYRELINEIFKGPALPEDFSLYLHAPSVTDPSLAPQGCSTYYVLSPVPHLAAAPIDWSVEGPR
YRDRILDYLEARILPGLKSDLATCRIFTPQDFNTELNAHLGSAFSLEPILTQSAYFRAHNADDKIKGLYLVGAGTHPGAG
IPGVVGSAKATARVILEDQRELAEAQ

Sequences:

>Translated_506_residues
MSQEMQNAKTAVVIGSGFGGLSLAIRLQSAGIATTLVEKRDKFGGRAYVYEQDGFTFDAGPTVITDPTCLQELFALSGRK
LENYVELMPVSPFYQLRWEDGATFDYVNDQAELERQIAAFCPADVDGYRRFRSYSERLLEEGYVKLGHVPFPDFRSMVRV
APQLVALQSYRSVYSKVSQYVSDEHLRQAFSFHSLLVGGNPFATSSIYALIHALERRWGVWFPRGGTGALINKGLVQLFK
DLGGEVTLSTSVSRIETANGRVSAVVAEDGRRFAADIVASNADVVHTYRDLLKDEPLARPTAQSLMRKRFSMSLFVIYFG
LRREHPELKHHIILFGRRYRELINEIFKGPALPEDFSLYLHAPSVTDPSLAPQGCSTYYVLSPVPHLAAAPIDWSVEGPR
YRDRILDYLEARILPGLKSDLATCRIFTPQDFNTELNAHLGSAFSLEPILTQSAYFRAHNADDKIKGLYLVGAGTHPGAG
IPGVVGSAKATARVILEDQRELAEAQ
>Mature_505_residues
SQEMQNAKTAVVIGSGFGGLSLAIRLQSAGIATTLVEKRDKFGGRAYVYEQDGFTFDAGPTVITDPTCLQELFALSGRKL
ENYVELMPVSPFYQLRWEDGATFDYVNDQAELERQIAAFCPADVDGYRRFRSYSERLLEEGYVKLGHVPFPDFRSMVRVA
PQLVALQSYRSVYSKVSQYVSDEHLRQAFSFHSLLVGGNPFATSSIYALIHALERRWGVWFPRGGTGALINKGLVQLFKD
LGGEVTLSTSVSRIETANGRVSAVVAEDGRRFAADIVASNADVVHTYRDLLKDEPLARPTAQSLMRKRFSMSLFVIYFGL
RREHPELKHHIILFGRRYRELINEIFKGPALPEDFSLYLHAPSVTDPSLAPQGCSTYYVLSPVPHLAAAPIDWSVEGPRY
RDRILDYLEARILPGLKSDLATCRIFTPQDFNTELNAHLGSAFSLEPILTQSAYFRAHNADDKIKGLYLVGAGTHPGAGI
PGVVGSAKATARVILEDQRELAEAQ

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 56225; Mature: 56093

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS00982 PHYTOENE_DH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQEMQNAKTAVVIGSGFGGLSLAIRLQSAGIATTLVEKRDKFGGRAYVYEQDGFTFDAG
CCCCCCCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCEEECCC
PTVITDPTCLQELFALSGRKLENYVELMPVSPFYQLRWEDGATFDYVNDQAELERQIAAF
CCEEECHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHH
CPADVDGYRRFRSYSERLLEEGYVKLGHVPFPDFRSMVRVAPQLVALQSYRSVYSKVSQY
CCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSDEHLRQAFSFHSLLVGGNPFATSSIYALIHALERRWGVWFPRGGTGALINKGLVQLFK
HHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
DLGGEVTLSTSVSRIETANGRVSAVVAEDGRRFAADIVASNADVVHTYRDLLKDEPLARP
HCCCCEEEECCHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCH
TAQSLMRKRFSMSLFVIYFGLRREHPELKHHIILFGRRYRELINEIFKGPALPEDFSLYL
HHHHHHHHHHHHHHEEEEHHHHCCCCHHHHHEEEECHHHHHHHHHHHCCCCCCCCCEEEE
HAPSVTDPSLAPQGCSTYYVLSPVPHLAAAPIDWSVEGPRYRDRILDYLEARILPGLKSD
ECCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHC
LATCRIFTPQDFNTELNAHLGSAFSLEPILTQSAYFRAHNADDKIKGLYLVGAGTHPGAG
CCEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHEECCCCCCCCEEEEEECCCCCCCC
IPGVVGSAKATARVILEDQRELAEAQ
CCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQEMQNAKTAVVIGSGFGGLSLAIRLQSAGIATTLVEKRDKFGGRAYVYEQDGFTFDAG
CCCCCCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCEEECCC
PTVITDPTCLQELFALSGRKLENYVELMPVSPFYQLRWEDGATFDYVNDQAELERQIAAF
CCEEECHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHH
CPADVDGYRRFRSYSERLLEEGYVKLGHVPFPDFRSMVRVAPQLVALQSYRSVYSKVSQY
CCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSDEHLRQAFSFHSLLVGGNPFATSSIYALIHALERRWGVWFPRGGTGALINKGLVQLFK
HHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
DLGGEVTLSTSVSRIETANGRVSAVVAEDGRRFAADIVASNADVVHTYRDLLKDEPLARP
HCCCCEEEECCHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCH
TAQSLMRKRFSMSLFVIYFGLRREHPELKHHIILFGRRYRELINEIFKGPALPEDFSLYL
HHHHHHHHHHHHHHEEEEHHHHCCCCHHHHHEEEECHHHHHHHHHHHCCCCCCCCCEEEE
HAPSVTDPSLAPQGCSTYYVLSPVPHLAAAPIDWSVEGPRYRDRILDYLEARILPGLKSD
ECCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHC
LATCRIFTPQDFNTELNAHLGSAFSLEPILTQSAYFRAHNADDKIKGLYLVGAGTHPGAG
CCEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHEECCCCCCCCEEEEEECCCCCCCC
IPGVVGSAKATARVILEDQRELAEAQ
CCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2254247 [H]