| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is dht [H]
Identifier: 146342980
GI number: 146342980
Start: 6389175
End: 6390629
Strand: Direct
Name: dht [H]
Synonym: BRADO6163
Alternate gene names: 146342980
Gene position: 6389175-6390629 (Clockwise)
Preceding gene: 146342979
Following gene: 146342981
Centisome position: 85.68
GC content: 67.49
Gene sequence:
>1455_bases ATGTCCCTGTTCATCCGTGGCGGCACGGTGGTGAACCACGATCATTCCCGCCGCGCCGACGTGCTCATCCAAAGCGGGAC GATCGTTGCCGTCGGCACCGCGATCGAGCCGCCGCTGTCGGCCGAGGTGATCGATGCCGATGGCTGCTATGTGCTTCCTG GCGGCATCGATCCGCACACCCATCTCGAGCTCGGCTTCATGGGAACGGTGTCGGCCGACGATTTCGAATGGGGCACTAAG GCGGGGCTGTCAGGCGGCACCACAATGGTGGTGGATTTCTGCATCCCCGACCCCGGGCAGTCGATGCTCGCGGCCTATCA GGACTGGCGGCGCAAATCGGAGAAGGCTGCGGCCGACTACGGCTTCCACATGGCCGTGACCTCCTGGTCGAAGCAGGTGT TCGACGAGATGGAGGTGGTGGTCAAGACCTACGGCATCAACACCTTCAAGCATTTCATGGCCTACAAGGGCGCGCTGATG GTGAATGACGACGAGTTGTACAACTCGTTCGCGCGTTGCGCAGCGCTCGGCGCAATGCCGCTGGTCCATGCCGAGAACGG CGACGTCGTCGCACGCATGCAGGAGGCGATACTGGCGCGCGGCATCGACGGGCCGGAGGGCCACGCGTTCTCGCGCCCAC CGGAGGTCGAGGGCGAGGCGACCAGCCGCGCGATCATGATCGCCGACATGACGGGCGCGCCGCTCTATGTCGTGCACACC AGCTGCCGCCAGTCGCACGAGGCGATCGCGCGCGCCCGCGCCGCCGGCCAGCGCGTCTATGGCGAGCCGCTGATCCAGCA TCTGCTGCTCGACGACAGCGAATATCGCCGTGACGACTGGGACCATGCCGCGGCCTGCGTGATGTCGCCGCCGTTCCGCG ACCGGGCGCATCAGGACAGCCTGTGGGCCGGACTGCAATCGGGCTCGCTGCAGGTGGTCGCGACCGATCATTGCGCCTTC ACGCTGGCGCAGAAGCGCCTCGGCCGCGGCGACTTCCGCAGGATTCCGAACGGCACCGGCGGGCTCGAGGACCGGATGCC GCTGCTGTGGACGGCCGGCGTCGGCACCGGACGGCTGACCAAGGAGGAGTTCGTCGCGGTCACCTCGGCGAATATCGCGC GCATCCTCAATATCTTCCCGCGCAAGGGCGCGATCATGGCGGGCTCCGATGCTGACCTGGTGGTGTGGGACCCGGCCGCC CACAAGACGATCCGCGCCAGCCGTCAGGTCAGCCGCATCGACTACAACGTCTTCGAAGGCTTCACCTGCACCGGCGGCCC CGCCATGACGGTGTCGCGTGGACGCATCGCCTGGCGCGACGGCGAGTTGCGCGCGCAAGCCGGCGACGGCCGCTATGTCG AGCGGCCGGCCTTTCCGTCCGTGCATGTCGCCAATTCCACCTGGAAGGAGATCACCGCGCCGCGCGCCGTCGCGCGCGAG ATGGTCACGCCCTAG
Upstream 100 bases:
>100_bases CGCTCCTGGTCAAATTTTGATCAGCGCGAGTCGGCGCGGCCGCGCTAGATTCAAGATGCGGCGTCCTGCAACTGCGTCGC GACGAGCGCGAGGCCAGCCC
Downstream 100 bases:
>100_bases ACGATCGGCTTCCGAAGTCCTGTCGGAAGTGATCCGCGGCCATCCCGCCCTCCGCTGTCATCGTCGGCGGAGGCGCAGCG GCGAATTGCTCGCCTCAGAT
Product: phenylhydantoinase
Products: NA
Alternate protein names: DHPase [H]
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MSLFIRGGTVVNHDHSRRADVLIQSGTIVAVGTAIEPPLSAEVIDADGCYVLPGGIDPHTHLELGFMGTVSADDFEWGTK AGLSGGTTMVVDFCIPDPGQSMLAAYQDWRRKSEKAAADYGFHMAVTSWSKQVFDEMEVVVKTYGINTFKHFMAYKGALM VNDDELYNSFARCAALGAMPLVHAENGDVVARMQEAILARGIDGPEGHAFSRPPEVEGEATSRAIMIADMTGAPLYVVHT SCRQSHEAIARARAAGQRVYGEPLIQHLLLDDSEYRRDDWDHAAACVMSPPFRDRAHQDSLWAGLQSGSLQVVATDHCAF TLAQKRLGRGDFRRIPNGTGGLEDRMPLLWTAGVGTGRLTKEEFVAVTSANIARILNIFPRKGAIMAGSDADLVVWDPAA HKTIRASRQVSRIDYNVFEGFTCTGGPAMTVSRGRIAWRDGELRAQAGDGRYVERPAFPSVHVANSTWKEITAPRAVARE MVTP
Sequences:
>Translated_484_residues MSLFIRGGTVVNHDHSRRADVLIQSGTIVAVGTAIEPPLSAEVIDADGCYVLPGGIDPHTHLELGFMGTVSADDFEWGTK AGLSGGTTMVVDFCIPDPGQSMLAAYQDWRRKSEKAAADYGFHMAVTSWSKQVFDEMEVVVKTYGINTFKHFMAYKGALM VNDDELYNSFARCAALGAMPLVHAENGDVVARMQEAILARGIDGPEGHAFSRPPEVEGEATSRAIMIADMTGAPLYVVHT SCRQSHEAIARARAAGQRVYGEPLIQHLLLDDSEYRRDDWDHAAACVMSPPFRDRAHQDSLWAGLQSGSLQVVATDHCAF TLAQKRLGRGDFRRIPNGTGGLEDRMPLLWTAGVGTGRLTKEEFVAVTSANIARILNIFPRKGAIMAGSDADLVVWDPAA HKTIRASRQVSRIDYNVFEGFTCTGGPAMTVSRGRIAWRDGELRAQAGDGRYVERPAFPSVHVANSTWKEITAPRAVARE MVTP >Mature_483_residues SLFIRGGTVVNHDHSRRADVLIQSGTIVAVGTAIEPPLSAEVIDADGCYVLPGGIDPHTHLELGFMGTVSADDFEWGTKA GLSGGTTMVVDFCIPDPGQSMLAAYQDWRRKSEKAAADYGFHMAVTSWSKQVFDEMEVVVKTYGINTFKHFMAYKGALMV NDDELYNSFARCAALGAMPLVHAENGDVVARMQEAILARGIDGPEGHAFSRPPEVEGEATSRAIMIADMTGAPLYVVHTS CRQSHEAIARARAAGQRVYGEPLIQHLLLDDSEYRRDDWDHAAACVMSPPFRDRAHQDSLWAGLQSGSLQVVATDHCAFT LAQKRLGRGDFRRIPNGTGGLEDRMPLLWTAGVGTGRLTKEEFVAVTSANIARILNIFPRKGAIMAGSDADLVVWDPAAH KTIRASRQVSRIDYNVFEGFTCTGGPAMTVSRGRIAWRDGELRAQAGDGRYVERPAFPSVHVANSTWKEITAPRAVAREM VTP
Specific function: Catalyzes the hydrolysis of dihydropyrimidines and of the structurally related DL-5-mono-substituted hydantoins, to produce N-carbamoyl-D-amino acids [H]
COG id: COG0044
COG function: function code F; Dihydroorotase and related cyclic amidohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503375, Length=462, Percent_Identity=48.4848484848485, Blast_Score=454, Evalue=1e-127, Organism=Homo sapiens, GI4503377, Length=459, Percent_Identity=45.3159041394335, Blast_Score=427, Evalue=1e-119, Organism=Homo sapiens, GI190194363, Length=459, Percent_Identity=46.1873638344227, Blast_Score=425, Evalue=1e-119, Organism=Homo sapiens, GI4503051, Length=459, Percent_Identity=43.7908496732026, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI62422571, Length=459, Percent_Identity=43.7908496732026, Blast_Score=416, Evalue=1e-116, Organism=Homo sapiens, GI4503379, Length=484, Percent_Identity=41.7355371900826, Blast_Score=409, Evalue=1e-114, Organism=Homo sapiens, GI19923821, Length=459, Percent_Identity=44.0087145969499, Blast_Score=395, Evalue=1e-110, Organism=Homo sapiens, GI18105007, Length=427, Percent_Identity=24.5901639344262, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI87082175, Length=464, Percent_Identity=40.301724137931, Blast_Score=341, Evalue=6e-95, Organism=Escherichia coli, GI1786722, Length=450, Percent_Identity=25.7777777777778, Blast_Score=135, Evalue=4e-33, Organism=Caenorhabditis elegans, GI17539558, Length=456, Percent_Identity=47.5877192982456, Blast_Score=438, Evalue=1e-123, Organism=Caenorhabditis elegans, GI71989490, Length=483, Percent_Identity=43.6853002070393, Blast_Score=425, Evalue=1e-119, Organism=Caenorhabditis elegans, GI86575075, Length=444, Percent_Identity=32.2072072072072, Blast_Score=229, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6322218, Length=436, Percent_Identity=26.605504587156, Blast_Score=109, Evalue=9e-25, Organism=Drosophila melanogaster, GI221377917, Length=463, Percent_Identity=44.9244060475162, Blast_Score=407, Evalue=1e-114, Organism=Drosophila melanogaster, GI17137462, Length=461, Percent_Identity=44.468546637744, Blast_Score=402, Evalue=1e-112, Organism=Drosophila melanogaster, GI24644287, Length=296, Percent_Identity=45.6081081081081, Blast_Score=265, Evalue=5e-71, Organism=Drosophila melanogaster, GI24644289, Length=246, Percent_Identity=47.1544715447154, Blast_Score=234, Evalue=7e-62, Organism=Drosophila melanogaster, GI24642586, Length=439, Percent_Identity=25.9681093394077, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI18859883, Length=241, Percent_Identity=24.4813278008299, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011778 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.2.2 [H]
Molecular weight: Translated: 52674; Mature: 52543
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFIRGGTVVNHDHSRRADVLIQSGTIVAVGTAIEPPLSAEVIDADGCYVLPGGIDPHT CEEEEECCEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCEEECCCCCEEECCCCCCCC HLELGFMGTVSADDFEWGTKAGLSGGTTMVVDFCIPDPGQSMLAAYQDWRRKSEKAAADY EEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC GFHMAVTSWSKQVFDEMEVVVKTYGINTFKHFMAYKGALMVNDDELYNSFARCAALGAMP CEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCC LVHAENGDVVARMQEAILARGIDGPEGHAFSRPPEVEGEATSRAIMIADMTGAPLYVVHT EEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEC SCRQSHEAIARARAAGQRVYGEPLIQHLLLDDSEYRRDDWDHAAACVMSPPFRDRAHQDS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHCCCCHHHHHHEECCCCCCCCCCCCH LWAGLQSGSLQVVATDHCAFTLAQKRLGRGDFRRIPNGTGGLEDRMPLLWTAGVGTGRLT HHHCCCCCCEEEEEECCHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCCC KEEFVAVTSANIARILNIFPRKGAIMAGSDADLVVWDPAAHKTIRASRQVSRIDYNVFEG HHHEEEEHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHCCHHHHCC FTCTGGPAMTVSRGRIAWRDGELRAQAGDGRYVERPAFPSVHVANSTWKEITAPRAVARE EEECCCCEEEEECCEEEEECCCEEEECCCCCEEECCCCCCEEECCCCHHHHCCHHHHHHH MVTP HCCC >Mature Secondary Structure SLFIRGGTVVNHDHSRRADVLIQSGTIVAVGTAIEPPLSAEVIDADGCYVLPGGIDPHT EEEEECCEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCEEECCCCCEEECCCCCCCC HLELGFMGTVSADDFEWGTKAGLSGGTTMVVDFCIPDPGQSMLAAYQDWRRKSEKAAADY EEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC GFHMAVTSWSKQVFDEMEVVVKTYGINTFKHFMAYKGALMVNDDELYNSFARCAALGAMP CEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCC LVHAENGDVVARMQEAILARGIDGPEGHAFSRPPEVEGEATSRAIMIADMTGAPLYVVHT EEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEC SCRQSHEAIARARAAGQRVYGEPLIQHLLLDDSEYRRDDWDHAAACVMSPPFRDRAHQDS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHCCCCHHHHHHEECCCCCCCCCCCCH LWAGLQSGSLQVVATDHCAFTLAQKRLGRGDFRRIPNGTGGLEDRMPLLWTAGVGTGRLT HHHCCCCCCEEEEEECCHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCCC KEEFVAVTSANIARILNIFPRKGAIMAGSDADLVVWDPAAHKTIRASRQVSRIDYNVFEG HHHEEEEHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHCCHHHHCC FTCTGGPAMTVSRGRIAWRDGELRAQAGDGRYVERPAFPSVHVANSTWKEITAPRAVARE EEECCCCEEEEECCEEEEECCCEEEECCCCCEEECCCCCCEEECCCCHHHHCCHHHHHHH MVTP HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]