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The map label for this gene is 146342978

Identifier: 146342978

GI number: 146342978

Start: 6386534

End: 6387694

Strand: Direct

Name: 146342978

Synonym: BRADO6161

Alternate gene names: NA

Gene position: 6386534-6387694 (Clockwise)

Preceding gene: 146342976

Following gene: 146342979

Centisome position: 85.65

GC content: 68.48

Gene sequence:

>1161_bases
ATGGCCGGGTTGCCACAACGGAGCTCGGCAGGCGTGCACGACATCGGTCTCACTGCGATTGATCTCGGGCTGCGCGGCGC
CGCGAGTGGCCTGTTCACGATGATCGTTCTGGTGCTGATCAGGCTGCGCCCTGCAAATGCGCTGGCCATTCTCGGTCTTG
TGATGTCGGCCGGCGGCGCCGGCTTCGCCATCGCCACCGCGCCGTTCGTCCCGGCATCCACCTATTGGTGGACGCTGCCG
ATCCTGTCGGCGCAGCCGGTGGTGTTCTGGCTATGGGCGCGCGCGGCGTTCGACGACGAGTTTACGCTGCGGCGCTGGCA
CGGCGCGGTCTGGCTGGCGGTGATCGCGCTCGGCTTCACGGCGTCGCTGAGCTGGCCGATGTGGCCCGCCGTCACCAAGG
TCTGCGCCAAGGGCCTGTCGGCCGTGGCGCTCGTCTTATCGCTGCTCGCGATCGTACAGACGGTGTCGACCTGGCGTGAC
GACCTGATCGCGCGGCGCCGGCTGCTGCGCATGGCCGTGGTCGTCCTGAACCTCGGCTTCATCGTCTTCGTCGCGGGGCC
GCCTCTGCTGCCACTGCCCGTGGCGCCGCTCGGGCTCGTCGCCAACACCGGCGGAGTCGGCAGCTTGATCAGCGCGCTGA
CGCTCTGCGCGCTGGCGATGCTGGCAAGCTGGATGCTTTTCGGAGCGAACGCCGCCGCGGCGTTAGCGAGTCCGGTCGTC
GTGACGGCCGGCATCTCCGACGAGACGCCAGCCGCCGGGCCGGCCGACCCGCGCCCGGTCGTCGCACCGCTGCTGCTGCG
CCGGCTCGACCATCTCATGACCGCCGAGCGAATTTATCGCCAGGAAGGGCTGTCGATCGGCGGTCTCGCCGCCAAGCTCA
ACGTGCCGGAATATCGGCTGCGGCAGGCGATCAACGAGGGCCTCGGCCACCGCAACTTCAACGCCTTTCTCAACCGCTAC
CGGATCGACGATGCCAAGGCCGCGCTGGCGGATCCCAGCCAGCGCGAGGTACCGGTGCTGACGATCGCAATCGATGCCGG
CTTCCAGTCGATCGGACCGTTCAACCGCGCCTTCAAGGCGGCAACGGGCATGACGCCGACGGAATTCCGCCGCAAGGCGC
CGGCCACGACGGCCGATTTGAAGATTCGGCAAGCCGACTGA

Upstream 100 bases:

>100_bases
CAACATCCTCGCAGCTCGGAGTCGCCGACGCCGCAATCCGCTCACGGTTGCACCTTCCTTTAGCTCGTCGGCATTGTCGA
CGGCACGCTCAGGATGCAAG

Downstream 100 bases:

>100_bases
AAGATTCGGCTGGCCGAATTCGCGATCCGGCCGACACGCAAGGGCTGGCGGACGCAAGGGTGAAAGGCACCGTTTCGTCG
CTCGCGAGGATTTCATGCCC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Transcriptional Regulator Arac Family; RhaRS Operon Positive Regulator; Helix-Turn-Helix Domain-Containing Protein; Regulatory Helix-Turn-Helix Protein AraC Family; Response Regulator Receiver Protein

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MAGLPQRSSAGVHDIGLTAIDLGLRGAASGLFTMIVLVLIRLRPANALAILGLVMSAGGAGFAIATAPFVPASTYWWTLP
ILSAQPVVFWLWARAAFDDEFTLRRWHGAVWLAVIALGFTASLSWPMWPAVTKVCAKGLSAVALVLSLLAIVQTVSTWRD
DLIARRRLLRMAVVVLNLGFIVFVAGPPLLPLPVAPLGLVANTGGVGSLISALTLCALAMLASWMLFGANAAAALASPVV
VTAGISDETPAAGPADPRPVVAPLLLRRLDHLMTAERIYRQEGLSIGGLAAKLNVPEYRLRQAINEGLGHRNFNAFLNRY
RIDDAKAALADPSQREVPVLTIAIDAGFQSIGPFNRAFKAATGMTPTEFRRKAPATTADLKIRQAD

Sequences:

>Translated_386_residues
MAGLPQRSSAGVHDIGLTAIDLGLRGAASGLFTMIVLVLIRLRPANALAILGLVMSAGGAGFAIATAPFVPASTYWWTLP
ILSAQPVVFWLWARAAFDDEFTLRRWHGAVWLAVIALGFTASLSWPMWPAVTKVCAKGLSAVALVLSLLAIVQTVSTWRD
DLIARRRLLRMAVVVLNLGFIVFVAGPPLLPLPVAPLGLVANTGGVGSLISALTLCALAMLASWMLFGANAAAALASPVV
VTAGISDETPAAGPADPRPVVAPLLLRRLDHLMTAERIYRQEGLSIGGLAAKLNVPEYRLRQAINEGLGHRNFNAFLNRY
RIDDAKAALADPSQREVPVLTIAIDAGFQSIGPFNRAFKAATGMTPTEFRRKAPATTADLKIRQAD
>Mature_385_residues
AGLPQRSSAGVHDIGLTAIDLGLRGAASGLFTMIVLVLIRLRPANALAILGLVMSAGGAGFAIATAPFVPASTYWWTLPI
LSAQPVVFWLWARAAFDDEFTLRRWHGAVWLAVIALGFTASLSWPMWPAVTKVCAKGLSAVALVLSLLAIVQTVSTWRDD
LIARRRLLRMAVVVLNLGFIVFVAGPPLLPLPVAPLGLVANTGGVGSLISALTLCALAMLASWMLFGANAAAALASPVVV
TAGISDETPAAGPADPRPVVAPLLLRRLDHLMTAERIYRQEGLSIGGLAAKLNVPEYRLRQAINEGLGHRNFNAFLNRYR
IDDAKAALADPSQREVPVLTIAIDAGFQSIGPFNRAFKAATGMTPTEFRRKAPATTADLKIRQAD

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40961; Mature: 40829

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLPQRSSAGVHDIGLTAIDLGLRGAASGLFTMIVLVLIRLRPANALAILGLVMSAGGA
CCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
GFAIATAPFVPASTYWWTLPILSAQPVVFWLWARAAFDDEFTLRRWHGAVWLAVIALGFT
CEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ASLSWPMWPAVTKVCAKGLSAVALVLSLLAIVQTVSTWRDDLIARRRLLRMAVVVLNLGF
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
IVFVAGPPLLPLPVAPLGLVANTGGVGSLISALTLCALAMLASWMLFGANAAAALASPVV
EEEECCCCCCCCCCCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEE
VTAGISDETPAAGPADPRPVVAPLLLRRLDHLMTAERIYRQEGLSIGGLAAKLNVPEYRL
EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHH
RQAINEGLGHRNFNAFLNRYRIDDAKAALADPSQREVPVLTIAIDAGFQSIGPFNRAFKA
HHHHHHCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEEECCCHHCCCHHHHHHH
ATGMTPTEFRRKAPATTADLKIRQAD
HCCCCHHHHHHCCCCCCCCEEEEECC
>Mature Secondary Structure 
AGLPQRSSAGVHDIGLTAIDLGLRGAASGLFTMIVLVLIRLRPANALAILGLVMSAGGA
CCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
GFAIATAPFVPASTYWWTLPILSAQPVVFWLWARAAFDDEFTLRRWHGAVWLAVIALGFT
CEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ASLSWPMWPAVTKVCAKGLSAVALVLSLLAIVQTVSTWRDDLIARRRLLRMAVVVLNLGF
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
IVFVAGPPLLPLPVAPLGLVANTGGVGSLISALTLCALAMLASWMLFGANAAAALASPVV
EEEECCCCCCCCCCCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEE
VTAGISDETPAAGPADPRPVVAPLLLRRLDHLMTAERIYRQEGLSIGGLAAKLNVPEYRL
EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHH
RQAINEGLGHRNFNAFLNRYRIDDAKAALADPSQREVPVLTIAIDAGFQSIGPFNRAFKA
HHHHHHCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEEECCCHHCCCHHHHHHH
ATGMTPTEFRRKAPATTADLKIRQAD
HCCCCHHHHHHCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA