| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342975
Identifier: 146342975
GI number: 146342975
Start: 6383108
End: 6383659
Strand: Direct
Name: 146342975
Synonym: BRADO6158
Alternate gene names: NA
Gene position: 6383108-6383659 (Clockwise)
Preceding gene: 146342970
Following gene: 146342976
Centisome position: 85.6
GC content: 66.3
Gene sequence:
>552_bases ATGATCCGGACCAAGGGGCTCGCGGGCCTAAAGACGCGCGATCTCGCCCAGGAGATCGGCGTCGCCAACGGCGCAGTCTA CAATCTCGTCGCCGATGTCGACGAACTGGTGCTGATGGTCGGATCGCGCACCTTGGCCCGGCTCGACGCCGAGCTGTCGC AAGCGGAGAGCGCGGGACCACCCGACTCGGAAGGCGCGCTGGTGCGCATCGCCATCGCTTATTGCGATTTCGCCGCTCAC AATCTGGAGCTCTGGCGCGCCCTGTTCGAGCACCGCATGCCGCCGGAGAAGCCGCTGCCCGACTGGGCGATCGCCGACCA GATGCATCTGTTCCGCCACATCCACCAGCCGCTCGCCGCGCTGTTTCCGCAGCGCTCGTTCGATGACATCAGCGTCACCG CGCGCAGCCTGTTCTCCGCGGTCCACGGCATGGTCGCACTCGGTCTGGAGCAGAAGCTGATCGCGGTACCGCTCGCAGCC TTGCGCCAGCAGATCGCAACCATGGTGCAGGCCATGGTGACGGGACTCGTGTCGGCGGCAAAGACCGCTTAG
Upstream 100 bases:
>100_bases GAGAATTTTTGAGCGTCGCTCAATATTTTGGTTAATGATGTCTAAAACACTGGAACGACGCGCGAAACAGCGCGAGGCCC TGATCGAGGCCGCTGAGCGG
Downstream 100 bases:
>100_bases CCAGGCAAGATTGACACGGCTCTGCCATGCCGGACGCGAGCGGCGTCCGGCGCTCCCAACTATCAAATGAGATGACGTCT CGGGGAGACGCCGCCTGATC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; Tetr Family Transcriptional Regulator
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MIRTKGLAGLKTRDLAQEIGVANGAVYNLVADVDELVLMVGSRTLARLDAELSQAESAGPPDSEGALVRIAIAYCDFAAH NLELWRALFEHRMPPEKPLPDWAIADQMHLFRHIHQPLAALFPQRSFDDISVTARSLFSAVHGMVALGLEQKLIAVPLAA LRQQIATMVQAMVTGLVSAAKTA
Sequences:
>Translated_183_residues MIRTKGLAGLKTRDLAQEIGVANGAVYNLVADVDELVLMVGSRTLARLDAELSQAESAGPPDSEGALVRIAIAYCDFAAH NLELWRALFEHRMPPEKPLPDWAIADQMHLFRHIHQPLAALFPQRSFDDISVTARSLFSAVHGMVALGLEQKLIAVPLAA LRQQIATMVQAMVTGLVSAAKTA >Mature_183_residues MIRTKGLAGLKTRDLAQEIGVANGAVYNLVADVDELVLMVGSRTLARLDAELSQAESAGPPDSEGALVRIAIAYCDFAAH NLELWRALFEHRMPPEKPLPDWAIADQMHLFRHIHQPLAALFPQRSFDDISVTARSLFSAVHGMVALGLEQKLIAVPLAA LRQQIATMVQAMVTGLVSAAKTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19802; Mature: 19802
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTKGLAGLKTRDLAQEIGVANGAVYNLVADVDELVLMVGSRTLARLDAELSQAESAGP CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC PDSEGALVRIAIAYCDFAAHNLELWRALFEHRMPPEKPLPDWAIADQMHLFRHIHQPLAA CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LFPQRSFDDISVTARSLFSAVHGMVALGLEQKLIAVPLAALRQQIATMVQAMVTGLVSAA HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTA CCC >Mature Secondary Structure MIRTKGLAGLKTRDLAQEIGVANGAVYNLVADVDELVLMVGSRTLARLDAELSQAESAGP CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC PDSEGALVRIAIAYCDFAAHNLELWRALFEHRMPPEKPLPDWAIADQMHLFRHIHQPLAA CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LFPQRSFDDISVTARSLFSAVHGMVALGLEQKLIAVPLAALRQQIATMVQAMVTGLVSAA HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA