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The map label for this gene is bphC [H]

Identifier: 146342863

GI number: 146342863

Start: 6267846

End: 6268829

Strand: Reverse

Name: bphC [H]

Synonym: BRADO6043

Alternate gene names: 146342863

Gene position: 6268829-6267846 (Counterclockwise)

Preceding gene: 146342868

Following gene: 146342859

Centisome position: 84.07

GC content: 65.85

Gene sequence:

>984_bases
ATGGAGATCACGGCGCTCGGCTACATCGGGATCAAGTCGCCCCAGGCGGAGCAGTGGGGACGGATGGCGACCGAGCTGCT
CGGGATGCAGCGCGTCGATCGCGCGGCTGACATGCAGGCCTACCGCATGGACGATCGCAAGCAGCGGCTGATCGTCGACG
GCAGCGGTGATGACGGACTTGCCGTCATGGGCTGGGAGGTCGGCGATGCTGCGGCGCTCGCGCGGCTGGCTGGCCGTCTC
GAGGACCATGGCGTGAAGGTCATCAGCGGCTCGCGCGCGCTCGCCGACGAGCGTCATGTCACCGAGCTGATCTCGTTTCA
GGATCCGGCCGGCCACACAATCGAGGTGTTCTGGGGCGCAGCGGTTGCCGCGGATCCGTTCAGGCCGGGACGTCCGATCT
CCGGCTTTCGCACCGGGCCGCTTGGCATGGGACATGTCGTGCTCAACGTCGAGGAGGTCGAGCCGCTGCTGACATTCTAT
CGCGACCTGCTCGGCTTCCAGGTGTCCGATTTCGGCCTGACGCCATACAAGCTGTATTTCTTCCACGTCAACGGCCGCCA
TCACAGCTTTGCGATGGTCGGCTCCGGCCGCCGCACGCTGCATCATTTCATGGTGGAGCTCGGCAGCCTCGACGACGTCG
GTCAGGGCTATGATCTGGCACAGCTCGACGAGGGACGCGTGGCCTACACGCTGGGCCGGCACACCAACGACCACATGACC
TCGTTCTACGTGAACACGCCGTCCGGCTTCTTCATCGAATATGGCTGGGGCGGCCGCGTGATCGATCCCGCGAGCTGGCA
GCCGCACGAGACCTTCGATGGTCCGTCATTATGGGGACACGAGCGCTTGTATTTGCCGGATGAGCCGCGCAAGCGCATGC
GCGACATGCGCCTGTCGGCCGCCGCACGCGGCGTCCGCGTTCCGGACCCGCGCGTTCCGCCGCTGAACTGCGCCTGGCTC
GACGCCGTGATCGCACAGGAATGA

Upstream 100 bases:

>100_bases
CCGTCCTGAGAACGCGAGCCGGATGCAGGGGCGGCAGTGTACTGCAGGACCGCGCGGAGCCGATACGAAATTCGGCCCGC
GCCTGTCGGGAGGAAACACC

Downstream 100 bases:

>100_bases
GCTGAGCCGTCGACTACACCGGAATCCGCACGCTCGCGCGCAGGCCGCCCATGGGGCTGTCGCCTAGGGTGATGTCGCCG
CCATGGGAGCGGGCGATGTC

Product: putative biphenyl-2,3-diol 1,2-dioxygenase

Products: NA

Alternate protein names: 2,3-dihydroxybiphenyl dioxygenase; DHBD; 23OHBP oxygenase [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MEITALGYIGIKSPQAEQWGRMATELLGMQRVDRAADMQAYRMDDRKQRLIVDGSGDDGLAVMGWEVGDAAALARLAGRL
EDHGVKVISGSRALADERHVTELISFQDPAGHTIEVFWGAAVAADPFRPGRPISGFRTGPLGMGHVVLNVEEVEPLLTFY
RDLLGFQVSDFGLTPYKLYFFHVNGRHHSFAMVGSGRRTLHHFMVELGSLDDVGQGYDLAQLDEGRVAYTLGRHTNDHMT
SFYVNTPSGFFIEYGWGGRVIDPASWQPHETFDGPSLWGHERLYLPDEPRKRMRDMRLSAAARGVRVPDPRVPPLNCAWL
DAVIAQE

Sequences:

>Translated_327_residues
MEITALGYIGIKSPQAEQWGRMATELLGMQRVDRAADMQAYRMDDRKQRLIVDGSGDDGLAVMGWEVGDAAALARLAGRL
EDHGVKVISGSRALADERHVTELISFQDPAGHTIEVFWGAAVAADPFRPGRPISGFRTGPLGMGHVVLNVEEVEPLLTFY
RDLLGFQVSDFGLTPYKLYFFHVNGRHHSFAMVGSGRRTLHHFMVELGSLDDVGQGYDLAQLDEGRVAYTLGRHTNDHMT
SFYVNTPSGFFIEYGWGGRVIDPASWQPHETFDGPSLWGHERLYLPDEPRKRMRDMRLSAAARGVRVPDPRVPPLNCAWL
DAVIAQE
>Mature_327_residues
MEITALGYIGIKSPQAEQWGRMATELLGMQRVDRAADMQAYRMDDRKQRLIVDGSGDDGLAVMGWEVGDAAALARLAGRL
EDHGVKVISGSRALADERHVTELISFQDPAGHTIEVFWGAAVAADPFRPGRPISGFRTGPLGMGHVVLNVEEVEPLLTFY
RDLLGFQVSDFGLTPYKLYFFHVNGRHHSFAMVGSGRRTLHHFMVELGSLDDVGQGYDLAQLDEGRVAYTLGRHTNDHMT
SFYVNTPSGFFIEYGWGGRVIDPASWQPHETFDGPSLWGHERLYLPDEPRKRMRDMRLSAAARGVRVPDPRVPPLNCAWL
DAVIAQE

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017626
- InterPro:   IPR004360
- InterPro:   IPR000486 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: =1.13.11.39 [H]

Molecular weight: Translated: 36419; Mature: 36419

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS00082 EXTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITALGYIGIKSPQAEQWGRMATELLGMQRVDRAADMQAYRMDDRKQRLIVDGSGDDGL
CEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCE
AVMGWEVGDAAALARLAGRLEDHGVKVISGSRALADERHVTELISFQDPAGHTIEVFWGA
EEEEECCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEECC
AVAADPFRPGRPISGFRTGPLGMGHVVLNVEEVEPLLTFYRDLLGFQVSDFGLTPYKLYF
EEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCEEECCCCCEEEEEE
FHVNGRHHSFAMVGSGRRTLHHFMVELGSLDDVGQGYDLAQLDEGRVAYTLGRHTNDHMT
EEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEECCCCCCCEE
SFYVNTPSGFFIEYGWGGRVIDPASWQPHETFDGPSLWGHERLYLPDEPRKRMRDMRLSA
EEEEECCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHH
AARGVRVPDPRVPPLNCAWLDAVIAQE
HHCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MEITALGYIGIKSPQAEQWGRMATELLGMQRVDRAADMQAYRMDDRKQRLIVDGSGDDGL
CEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCE
AVMGWEVGDAAALARLAGRLEDHGVKVISGSRALADERHVTELISFQDPAGHTIEVFWGA
EEEEECCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEECC
AVAADPFRPGRPISGFRTGPLGMGHVVLNVEEVEPLLTFYRDLLGFQVSDFGLTPYKLYF
EEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCEEECCCCCEEEEEE
FHVNGRHHSFAMVGSGRRTLHHFMVELGSLDDVGQGYDLAQLDEGRVAYTLGRHTNDHMT
EEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEECCCCCCCEE
SFYVNTPSGFFIEYGWGGRVIDPASWQPHETFDGPSLWGHERLYLPDEPRKRMRDMRLSA
EEEEECCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHH
AARGVRVPDPRVPPLNCAWLDAVIAQE
HHCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3793719 [H]