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The map label for this gene is mcp4 [H]

Identifier: 146342769

GI number: 146342769

Start: 6162875

End: 6164560

Strand: Reverse

Name: mcp4 [H]

Synonym: BRADO5943

Alternate gene names: 146342769

Gene position: 6164560-6162875 (Counterclockwise)

Preceding gene: 146342770

Following gene: 146342764

Centisome position: 82.67

GC content: 65.72

Gene sequence:

>1686_bases
GTGCTGTTGAATAACCTGAAGATCGCCCCCAAGCTTGCCATCGTTGTGGGTGTTGCGCTGCTCGGACTCGGCGCGGCCGG
TACGCTAGCGAGCAATCTGATGGAGCGCGAGATGCTGAATGCGCGCGTCGATCAGGCCAAGGCGATCGTCGAAGCGGCGC
GCAACATGGCCGCAGGTCTCTGGAAGGAGGTAGAGGCTGGCAAGATGAGCAAGGAGGCGGCACTTGCAGAATTGAGCCGC
CGCGGCAATTCGATGACCTACGATGGCGGCACTGGCTATCTGTTCGGCACCAACTACGAAGGCATCACGGTCCTCGCGCC
TGATCCCAAACAGATCGGGTCCAATCGAATGGATGTGCTGACCAACGGCCGCAAGCTGTCCCAGGAGCTGATGGACGGCG
TCAAGGCGAAGGGCGAGATCCTTCTGACCTATGAATTCGTGCGGCCCGGACAGGACGTGCTCAGCCGCAAGATCAGCTAT
GCGGTCGCTGTTCCCGGCTTCAACATGTATCTCGGCACCGGCAGCTATATCGACGACATCGATACCAAGCTGAGGCCATT
GAAATGGCTGCTGGGAATCTCGATTTTCGGCATCGCCGTGGTCGCAGGCGGCATCGCCTGGCTGATCGGCCGCAGCATCA
GTCGCCCACTCGTACAACTGAGCAGCCGAATGCGCGACATTGCCGACGGCCAGCTCGAGGGCGAGATCCCCGGGGTCGGC
CGCGGTGACGAGATCGGCGGCATGGCCGCCACGGTTCAGATCTTCAAGGACAATGCGCTGCGGGTGCGCGAGCTTGAGCA
GGCGGAGGCCGCGAACAAGCAGCGCGCCGAGGCGGAGCGGCGCGCCGCCATGCAGAACCTCGCGGCCGACTTCGAGCGCA
GCGTCAACGGCATCGTCCGCTCGGTGGCTTCGGCCGCGGAGGGCATGCAGCACACCGCGGAATCGATGACCTCGACGGCG
AGCGATGCGAGCTCGCGCGCCTCCACCGTCAGCGCGGCCACGCAGAGCGCGAACGACAATGTCGGCACCGTGGCCTCCGC
AGCCGAGCAGCTGTCGAGCTCGGTCAGCGAGATTTCCCGCCAGGTCGCCCGCTCCAGCGAGGTCGCCAGCAAGGCGGTCG
GCGATGCCGAGCGTACCAATGCCACCGTGCAGGTGCTATCGTCCGGCGCCGAGAAGATCGGCGAGGTCGTCAAGCTGATC
CACTCGATCGCGGCGCAGACCAATCTGCTGGCGCTGAACGCGACCATCGAGGCGGCCCGCGCGGGAGAATCCGGCAAGGG
CTTTGCCGTCGTCGCCTCTGAGGTCAAGGCGCTCGCCAACCAGACCGCCAAGGCCACCGAGGAGATCTCGGCCCAGGTCG
CCGCGATGCAGACCTCGACGCAGGATGCGGTCGCCGCCATCACCGGTATCACACAGACCATCGCGCAGATGAGCGAGATC
ACCAATTCGATCTCGACCTCGATCGCGCAGCAGGGCGACGCGACGCGCGAGATCGCCCGCAACATTCAGTCCGTCGCAGC
GGGCTCGAACGAGATCAGCGCCCATATCGGCGGCGTCACCAAGGCCGCGGAGGCCACCGGCATGGCGGCCTCCGAGGTGC
TGGCCAGCGCCCGCGAGCTCGACAGCCAGTCCGGCCTGCTGCAGCAGGCGGTCGACGGCTTCATGGCCAAGGTGCGCGCG
GCCTGA

Upstream 100 bases:

>100_bases
CGAGATTCGCAACCGAACTCTAACCATCCCCGCATCATTTGATCTGCAGCTTAAATTGTGAGGTCGATGACATCGATCGC
GGATCGAGCGGAGTTCTCGC

Downstream 100 bases:

>100_bases
TCAAAACCGGCGCTGGCGTCGCAGCGCCAGCGCCGTTGGTCCGGAGGGCGGCGGGTTACTTGCCTTCTGTACTTGCCTTC
CGTTACTTGGCTTTGAGGAA

Product: putative methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MLLNNLKIAPKLAIVVGVALLGLGAAGTLASNLMEREMLNARVDQAKAIVEAARNMAAGLWKEVEAGKMSKEAALAELSR
RGNSMTYDGGTGYLFGTNYEGITVLAPDPKQIGSNRMDVLTNGRKLSQELMDGVKAKGEILLTYEFVRPGQDVLSRKISY
AVAVPGFNMYLGTGSYIDDIDTKLRPLKWLLGISIFGIAVVAGGIAWLIGRSISRPLVQLSSRMRDIADGQLEGEIPGVG
RGDEIGGMAATVQIFKDNALRVRELEQAEAANKQRAEAERRAAMQNLAADFERSVNGIVRSVASAAEGMQHTAESMTSTA
SDASSRASTVSAATQSANDNVGTVASAAEQLSSSVSEISRQVARSSEVASKAVGDAERTNATVQVLSSGAEKIGEVVKLI
HSIAAQTNLLALNATIEAARAGESGKGFAVVASEVKALANQTAKATEEISAQVAAMQTSTQDAVAAITGITQTIAQMSEI
TNSISTSIAQQGDATREIARNIQSVAAGSNEISAHIGGVTKAAEATGMAASEVLASARELDSQSGLLQQAVDGFMAKVRA
A

Sequences:

>Translated_561_residues
MLLNNLKIAPKLAIVVGVALLGLGAAGTLASNLMEREMLNARVDQAKAIVEAARNMAAGLWKEVEAGKMSKEAALAELSR
RGNSMTYDGGTGYLFGTNYEGITVLAPDPKQIGSNRMDVLTNGRKLSQELMDGVKAKGEILLTYEFVRPGQDVLSRKISY
AVAVPGFNMYLGTGSYIDDIDTKLRPLKWLLGISIFGIAVVAGGIAWLIGRSISRPLVQLSSRMRDIADGQLEGEIPGVG
RGDEIGGMAATVQIFKDNALRVRELEQAEAANKQRAEAERRAAMQNLAADFERSVNGIVRSVASAAEGMQHTAESMTSTA
SDASSRASTVSAATQSANDNVGTVASAAEQLSSSVSEISRQVARSSEVASKAVGDAERTNATVQVLSSGAEKIGEVVKLI
HSIAAQTNLLALNATIEAARAGESGKGFAVVASEVKALANQTAKATEEISAQVAAMQTSTQDAVAAITGITQTIAQMSEI
TNSISTSIAQQGDATREIARNIQSVAAGSNEISAHIGGVTKAAEATGMAASEVLASARELDSQSGLLQQAVDGFMAKVRA
A
>Mature_561_residues
MLLNNLKIAPKLAIVVGVALLGLGAAGTLASNLMEREMLNARVDQAKAIVEAARNMAAGLWKEVEAGKMSKEAALAELSR
RGNSMTYDGGTGYLFGTNYEGITVLAPDPKQIGSNRMDVLTNGRKLSQELMDGVKAKGEILLTYEFVRPGQDVLSRKISY
AVAVPGFNMYLGTGSYIDDIDTKLRPLKWLLGISIFGIAVVAGGIAWLIGRSISRPLVQLSSRMRDIADGQLEGEIPGVG
RGDEIGGMAATVQIFKDNALRVRELEQAEAANKQRAEAERRAAMQNLAADFERSVNGIVRSVASAAEGMQHTAESMTSTA
SDASSRASTVSAATQSANDNVGTVASAAEQLSSSVSEISRQVARSSEVASKAVGDAERTNATVQVLSSGAEKIGEVVKLI
HSIAAQTNLLALNATIEAARAGESGKGFAVVASEVKALANQTAKATEEISAQVAAMQTSTQDAVAAITGITQTIAQMSEI
TNSISTSIAQQGDATREIARNIQSVAAGSNEISAHIGGVTKAAEATGMAASEVLASARELDSQSGLLQQAVDGFMAKVRA
A

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=376, Percent_Identity=28.9893617021277, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1789453, Length=209, Percent_Identity=33.9712918660287, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1788194, Length=268, Percent_Identity=29.8507462686567, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI2367378, Length=338, Percent_Identity=28.1065088757396, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1788195, Length=321, Percent_Identity=26.4797507788162, Blast_Score=86, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58386; Mature: 58386

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNNLKIAPKLAIVVGVALLGLGAAGTLASNLMEREMLNARVDQAKAIVEAARNMAAGL
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKEVEAGKMSKEAALAELSRRGNSMTYDGGTGYLFGTNYEGITVLAPDPKQIGSNRMDVL
HHHHHHCCCHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCEEEECCCHHHHCCCCHHHH
TNGRKLSQELMDGVKAKGEILLTYEFVRPGQDVLSRKISYAVAVPGFNMYLGTGSYIDDI
HCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHEEECCCCEEEECCCCHHHHH
DTKLRPLKWLLGISIFGIAVVAGGIAWLIGRSISRPLVQLSSRMRDIADGQLEGEIPGVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RGDEIGGMAATVQIFKDNALRVRELEQAEAANKQRAEAERRAAMQNLAADFERSVNGIVR
CCCCCCCHHHEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVASAAEGMQHTAESMTSTASDASSRASTVSAATQSANDNVGTVASAAEQLSSSVSEISR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
QVARSSEVASKAVGDAERTNATVQVLSSGAEKIGEVVKLIHSIAAQTNLLALNATIEAAR
HHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHH
AGESGKGFAVVASEVKALANQTAKATEEISAQVAAMQTSTQDAVAAITGITQTIAQMSEI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TNSISTSIAQQGDATREIARNIQSVAAGSNEISAHIGGVTKAAEATGMAASEVLASAREL
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHCHHHHHHHHHHHHH
DSQSGLLQQAVDGFMAKVRAA
HHHCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLLNNLKIAPKLAIVVGVALLGLGAAGTLASNLMEREMLNARVDQAKAIVEAARNMAAGL
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKEVEAGKMSKEAALAELSRRGNSMTYDGGTGYLFGTNYEGITVLAPDPKQIGSNRMDVL
HHHHHHCCCHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCEEEECCCHHHHCCCCHHHH
TNGRKLSQELMDGVKAKGEILLTYEFVRPGQDVLSRKISYAVAVPGFNMYLGTGSYIDDI
HCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHEEECCCCEEEECCCCHHHHH
DTKLRPLKWLLGISIFGIAVVAGGIAWLIGRSISRPLVQLSSRMRDIADGQLEGEIPGVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RGDEIGGMAATVQIFKDNALRVRELEQAEAANKQRAEAERRAAMQNLAADFERSVNGIVR
CCCCCCCHHHEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVASAAEGMQHTAESMTSTASDASSRASTVSAATQSANDNVGTVASAAEQLSSSVSEISR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
QVARSSEVASKAVGDAERTNATVQVLSSGAEKIGEVVKLIHSIAAQTNLLALNATIEAAR
HHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHH
AGESGKGFAVVASEVKALANQTAKATEEISAQVAAMQTSTQDAVAAITGITQTIAQMSEI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TNSISTSIAQQGDATREIARNIQSVAAGSNEISAHIGGVTKAAEATGMAASEVLASAREL
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHCHHHHHHHHHHHHH
DSQSGLLQQAVDGFMAKVRAA
HHHCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]