| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342760
Identifier: 146342760
GI number: 146342760
Start: 6149927
End: 6151567
Strand: Reverse
Name: 146342760
Synonym: BRADO5934
Alternate gene names: NA
Gene position: 6151567-6149927 (Counterclockwise)
Preceding gene: 146342761
Following gene: 146342759
Centisome position: 82.5
GC content: 70.69
Gene sequence:
>1641_bases ATGGCCGACTACTACCCGCTGATAGCCCGCGCCATTGCCGGATTGGACCCCAACGCTCCCGGCGAAAGCCGGCGCGCGCT TTACGAGCGGGCTCGGGCGGCGCTGATCGCGCAGCTGCGCAGCGTCCAGCCGCCGCTCAGCGAATCCGAGATCACCCGCG AGCGGCTGTCGCTCGAGGAGGCGGTACGCAAGGTCGAGGCGGAAGCGGCTCAGCGCGCCCGCGAGGCGCAGCGGGCCTCC AGCGGTGCAGCCCGTCCCGGCGATGCGCTCCGGCGGGCCGGCGCGCGCAACCCGGAGGCTCCGGCGGCTCCCGCAGCTGA GCCCGGCGCGACGCCCGAGCCGGCCACAGCCCCAGTTCCGCGACCCCGGCCAGCACCGGCACCGGCTGCACGGAACGATC GTCCGCCTCTCGGCCCCGAGCCGGCGGATTCCAAGCCGGTGCGTCCTGTCCGCCCCGAGGCGCCGCCCCCCGCTGCCGCT CCCACGACGCCATTGCGGCCCCAGCCAACCCCCGCCGGTATCTCCGACGTGCCGCCGGTGCGCGAGCGTCCGGCTGCCCC GCGCCGCGCGCCCGATGCCAATGGTTCGGCCGCCGCGACGCCCTCGATGCGCGGTTTCCGCGATATCACCGCTGACGTCG ATGATCTCGGCAAGGCCACGGCGCAGGCCAACCGCGCCGCGCGCAAGACCTACGCCAACGTTCCGGCGACGGATCTCGAT CGCCTCGAGGACGATGACGACCGTCCGCCGCTGCCTGCCGAGCCGGCCTATTCCTACGACGAATCGGTTCAGGAGGCGGA GCGCTACGCGGTGCCGGCCACCGCATCGGCCCGTTCGCGGGCGGGCGGCGAGCGCGAGGCCAAGAAGAAGTCCGAGCGCA GCGGTTCGACTTTCCCGTTCAAGGCGGCCATCGCCGCCGGCATCGTGCTGATCCTGGTCGGCGCGGGCATCCTCTGGGGC CGTCCGCTGGTCGGCGCCGTCAGCGGACTGTTCAAATCGAACTCGACAGTCGAGGCGCCGAAGGACACTGCCGCGCCGCT TAGCAAGCCCAAGATCACGGACCGTGTCGGCCAGTCGCCATCGTCGGACCAGATCGCGCCGGTGGCGCAGAAAGTCGTGC TCTACGACGAGGATCCGGCCGACCCGAAGGGCAAGCAATATCTCGGCTCGGTGGTCTGGCGCACCGAGCAGATCAAGGCC ACGGGCACACAGAAGGCCGACATCGCCGTGCGCGCCGACATCGAAATCCCGGATCGCAAGTTCAAGATGACGATGTCGTT CCGCCGCAACACCGATACCTCCCTGCCGGCGAGCCACACGGCCGAGCTGACCTTCATCCTGCCGCAGAATTTCGACGGCG GCGGCGTCGGCAACGTGCCGGGCATCCTGATGAAGTCCAACGAGCAGGCGCGCGGCACGCCGCTGGCGGGTCTCGCCGTG AAGGTCACCGACGGCTTCTTCCTGGTCGGCCTGTCCAACGTCGACGCCGACCGGACGCGCAACGTGCAGCTTCTCAAGGA GCGCTCCTGGTTCGACGTTCCGCTGGTCTACAGCAATCAGCGCCGCGCGATCATCGCGATCGAGAAGGGAGCGCCCGGCG AGCGGGCGTTCAACGACGCCTTCGCGGTGTGGGGTGACTGA
Upstream 100 bases:
>100_bases GCTGCTTTCCACCAGTCCCGAACGCGAGGATACTATCCTGGTCCAGAATCCCTTCGAGGCGTGAGGGGACCCGACAGCGC AGCCCGCGAATTGAGTTGAT
Downstream 100 bases:
>100_bases CCGGACGGCAGGTGCCTCGCGCGGTCGGCGGATGAGCGGGGCAGGAGGTTGGGCATGAAGCGTTATCTGATCTTCGTCGC AATCGGCCCCGCGCTGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: CheA Signal Transduction Histidine Kinase; Helicase
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MADYYPLIARAIAGLDPNAPGESRRALYERARAALIAQLRSVQPPLSESEITRERLSLEEAVRKVEAEAAQRAREAQRAS SGAARPGDALRRAGARNPEAPAAPAAEPGATPEPATAPVPRPRPAPAPAARNDRPPLGPEPADSKPVRPVRPEAPPPAAA PTTPLRPQPTPAGISDVPPVRERPAAPRRAPDANGSAAATPSMRGFRDITADVDDLGKATAQANRAARKTYANVPATDLD RLEDDDDRPPLPAEPAYSYDESVQEAERYAVPATASARSRAGGEREAKKKSERSGSTFPFKAAIAAGIVLILVGAGILWG RPLVGAVSGLFKSNSTVEAPKDTAAPLSKPKITDRVGQSPSSDQIAPVAQKVVLYDEDPADPKGKQYLGSVVWRTEQIKA TGTQKADIAVRADIEIPDRKFKMTMSFRRNTDTSLPASHTAELTFILPQNFDGGGVGNVPGILMKSNEQARGTPLAGLAV KVTDGFFLVGLSNVDADRTRNVQLLKERSWFDVPLVYSNQRRAIIAIEKGAPGERAFNDAFAVWGD
Sequences:
>Translated_546_residues MADYYPLIARAIAGLDPNAPGESRRALYERARAALIAQLRSVQPPLSESEITRERLSLEEAVRKVEAEAAQRAREAQRAS SGAARPGDALRRAGARNPEAPAAPAAEPGATPEPATAPVPRPRPAPAPAARNDRPPLGPEPADSKPVRPVRPEAPPPAAA PTTPLRPQPTPAGISDVPPVRERPAAPRRAPDANGSAAATPSMRGFRDITADVDDLGKATAQANRAARKTYANVPATDLD RLEDDDDRPPLPAEPAYSYDESVQEAERYAVPATASARSRAGGEREAKKKSERSGSTFPFKAAIAAGIVLILVGAGILWG RPLVGAVSGLFKSNSTVEAPKDTAAPLSKPKITDRVGQSPSSDQIAPVAQKVVLYDEDPADPKGKQYLGSVVWRTEQIKA TGTQKADIAVRADIEIPDRKFKMTMSFRRNTDTSLPASHTAELTFILPQNFDGGGVGNVPGILMKSNEQARGTPLAGLAV KVTDGFFLVGLSNVDADRTRNVQLLKERSWFDVPLVYSNQRRAIIAIEKGAPGERAFNDAFAVWGD >Mature_545_residues ADYYPLIARAIAGLDPNAPGESRRALYERARAALIAQLRSVQPPLSESEITRERLSLEEAVRKVEAEAAQRAREAQRASS GAARPGDALRRAGARNPEAPAAPAAEPGATPEPATAPVPRPRPAPAPAARNDRPPLGPEPADSKPVRPVRPEAPPPAAAP TTPLRPQPTPAGISDVPPVRERPAAPRRAPDANGSAAATPSMRGFRDITADVDDLGKATAQANRAARKTYANVPATDLDR LEDDDDRPPLPAEPAYSYDESVQEAERYAVPATASARSRAGGEREAKKKSERSGSTFPFKAAIAAGIVLILVGAGILWGR PLVGAVSGLFKSNSTVEAPKDTAAPLSKPKITDRVGQSPSSDQIAPVAQKVVLYDEDPADPKGKQYLGSVVWRTEQIKAT GTQKADIAVRADIEIPDRKFKMTMSFRRNTDTSLPASHTAELTFILPQNFDGGGVGNVPGILMKSNEQARGTPLAGLAVK VTDGFFLVGLSNVDADRTRNVQLLKERSWFDVPLVYSNQRRAIIAIEKGAPGERAFNDAFAVWGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58065; Mature: 57934
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADYYPLIARAIAGLDPNAPGESRRALYERARAALIAQLRSVQPPLSESEITRERLSLEE CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AVRKVEAEAAQRAREAQRASSGAARPGDALRRAGARNPEAPAAPAAEPGATPEPATAPVP HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPRPAPAPAARNDRPPLGPEPADSKPVRPVRPEAPPPAAAPTTPLRPQPTPAGISDVPPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH RERPAAPRRAPDANGSAAATPSMRGFRDITADVDDLGKATAQANRAARKTYANVPATDLD HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH RLEDDDDRPPLPAEPAYSYDESVQEAERYAVPATASARSRAGGEREAKKKSERSGSTFPF HCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCH KAAIAAGIVLILVGAGILWGRPLVGAVSGLFKSNSTVEAPKDTAAPLSKPKITDRVGQSP HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCC SSDQIAPVAQKVVLYDEDPADPKGKQYLGSVVWRTEQIKATGTQKADIAVRADIEIPDRK CCCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCCCCE FKMTMSFRRNTDTSLPASHTAELTFILPQNFDGGGVGNVPGILMKSNEQARGTPLAGLAV EEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEE KVTDGFFLVGLSNVDADRTRNVQLLKERSWFDVPLVYSNQRRAIIAIEKGAPGERAFNDA EEECCEEEEEECCCCCCHHCCHHHHHHCCCCCCCEEECCCCEEEEEEECCCCCCHHHCCC FAVWGD EEECCC >Mature Secondary Structure ADYYPLIARAIAGLDPNAPGESRRALYERARAALIAQLRSVQPPLSESEITRERLSLEE CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AVRKVEAEAAQRAREAQRASSGAARPGDALRRAGARNPEAPAAPAAEPGATPEPATAPVP HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPRPAPAPAARNDRPPLGPEPADSKPVRPVRPEAPPPAAAPTTPLRPQPTPAGISDVPPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH RERPAAPRRAPDANGSAAATPSMRGFRDITADVDDLGKATAQANRAARKTYANVPATDLD HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH RLEDDDDRPPLPAEPAYSYDESVQEAERYAVPATASARSRAGGEREAKKKSERSGSTFPF HCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCH KAAIAAGIVLILVGAGILWGRPLVGAVSGLFKSNSTVEAPKDTAAPLSKPKITDRVGQSP HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCC SSDQIAPVAQKVVLYDEDPADPKGKQYLGSVVWRTEQIKATGTQKADIAVRADIEIPDRK CCCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCCCCE FKMTMSFRRNTDTSLPASHTAELTFILPQNFDGGGVGNVPGILMKSNEQARGTPLAGLAV EEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEE KVTDGFFLVGLSNVDADRTRNVQLLKERSWFDVPLVYSNQRRAIIAIEKGAPGERAFNDA EEECCEEEEEECCCCCCHHCCHHHHHHCCCCCCCEEECCCCEEEEEEECCCCCCHHHCCC FAVWGD EEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA