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The map label for this gene is ssuC [H]

Identifier: 146342739

GI number: 146342739

Start: 6130088

End: 6130894

Strand: Reverse

Name: ssuC [H]

Synonym: BRADO5911

Alternate gene names: 146342739

Gene position: 6130894-6130088 (Counterclockwise)

Preceding gene: 146342740

Following gene: 146342738

Centisome position: 82.22

GC content: 65.06

Gene sequence:

>807_bases
ATGAGCTTGATCGAAAGCCTTCCCAAGGTCCGCAAGCTGGCGGTGCCCAAGGCGGATGGATTTCTGCCCTGGCTCGTGCC
GCTTGCGATCATCCTGATCTGGCAGGCAGCCTCCGTCGCCGGTCTCGTGTCGCCGCGCGTGCTGCCGGCGCCGAGCGACG
TCGCGCGCGCCGGCTGGAAGCTGCTGTGGTCGGGCGAGCTCGGCCGCAACATCTGGGTCAGCTTCTGGCGCGCCTCGATC
GGCTTCGTGATCGGCGGCGGCATCGGCTTCGCCTTCGGTCTCGCCAATGGCCTGTCGCAGCTGTCGTCCAAGCTCACCGA
CACCACGCTGCAGATGATCCGCAACGTGCCGCATCTGGCGCTGATCCCGCTGGTCATCCTGTGGTTCGGCATCGACGAGA
GCGCAAAGCTGTTTCTCGTCGCACTCGGCGTGTTCTTCCCGGTTTATCTCAACACGCTGCACGGGATTCGCACCGTCGAT
CCGCAACTCATTGAAATGGGCCGCGTCTACGGCATGACGGACGGCGAGCTGTTCCGCCGCGTGATCTTCCCCGGCGCGCT
GCCGTCGATCTTCGTCGGCCTGCGCTTCGCGCTCGGCATCATGTGGCTCACCTTGATTGTTGCCGAGACGATCGCGGCGT
CATCCGGCCTCGGCTACATGGCGATGCAGGCGCGCGAGTTCATGCAGATCGACGTCGTCGTGCTCTCCATCCTGATCTAC
GCCCTGCTGGGCAAGGTCGCCGACAGCGCCTCGCGGCTGTTGGAGCGGCTGACGCTGTCCTGGCATCCGGCGTTCAGCAA
GCATTGA

Upstream 100 bases:

>100_bases
CGGAGCAGGGCGGCAACGTCACCAAGCTCCGCGCCAATACGGGTCCGTTTGGCGAGACCATCGCCAATGAGCATCGTCCC
CTGCAGCGGGCCTCGCAGTC

Downstream 100 bases:

>100_bases
GGTTACGTAAATGCAGCAAGTGCTCCGACTTCCCGTGTCCAGCGCCGAGGCGATCGACGGCTCCGACGTGGTCGGGCATG
CTGAGGCCTTCCGCCCTCAG

Product: aliphatic sulfonate ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSLIESLPKVRKLAVPKADGFLPWLVPLAIILIWQAASVAGLVSPRVLPAPSDVARAGWKLLWSGELGRNIWVSFWRASI
GFVIGGGIGFAFGLANGLSQLSSKLTDTTLQMIRNVPHLALIPLVILWFGIDESAKLFLVALGVFFPVYLNTLHGIRTVD
PQLIEMGRVYGMTDGELFRRVIFPGALPSIFVGLRFALGIMWLTLIVAETIAASSGLGYMAMQAREFMQIDVVVLSILIY
ALLGKVADSASRLLERLTLSWHPAFSKH

Sequences:

>Translated_268_residues
MSLIESLPKVRKLAVPKADGFLPWLVPLAIILIWQAASVAGLVSPRVLPAPSDVARAGWKLLWSGELGRNIWVSFWRASI
GFVIGGGIGFAFGLANGLSQLSSKLTDTTLQMIRNVPHLALIPLVILWFGIDESAKLFLVALGVFFPVYLNTLHGIRTVD
PQLIEMGRVYGMTDGELFRRVIFPGALPSIFVGLRFALGIMWLTLIVAETIAASSGLGYMAMQAREFMQIDVVVLSILIY
ALLGKVADSASRLLERLTLSWHPAFSKH
>Mature_267_residues
SLIESLPKVRKLAVPKADGFLPWLVPLAIILIWQAASVAGLVSPRVLPAPSDVARAGWKLLWSGELGRNIWVSFWRASIG
FVIGGGIGFAFGLANGLSQLSSKLTDTTLQMIRNVPHLALIPLVILWFGIDESAKLFLVALGVFFPVYLNTLHGIRTVDP
QLIEMGRVYGMTDGELFRRVIFPGALPSIFVGLRFALGIMWLTLIVAETIAASSGLGYMAMQAREFMQIDVVVLSILIYA
LLGKVADSASRLLERLTLSWHPAFSKH

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=243, Percent_Identity=62.1399176954732, Blast_Score=283, Evalue=1e-77,
Organism=Escherichia coli, GI1786564, Length=241, Percent_Identity=34.8547717842324, Blast_Score=130, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29294; Mature: 29163

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIESLPKVRKLAVPKADGFLPWLVPLAIILIWQAASVAGLVSPRVLPAPSDVARAGWK
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCE
LLWSGELGRNIWVSFWRASIGFVIGGGIGFAFGLANGLSQLSSKLTDTTLQMIRNVPHLA
EEECCCCCHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LIPLVILWFGIDESAKLFLVALGVFFPVYLNTLHGIRTVDPQLIEMGRVYGMTDGELFRR
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHH
VIFPGALPSIFVGLRFALGIMWLTLIVAETIAASSGLGYMAMQAREFMQIDVVVLSILIY
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALLGKVADSASRLLERLTLSWHPAFSKH
HHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SLIESLPKVRKLAVPKADGFLPWLVPLAIILIWQAASVAGLVSPRVLPAPSDVARAGWK
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCE
LLWSGELGRNIWVSFWRASIGFVIGGGIGFAFGLANGLSQLSSKLTDTTLQMIRNVPHLA
EEECCCCCHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LIPLVILWFGIDESAKLFLVALGVFFPVYLNTLHGIRTVDPQLIEMGRVYGMTDGELFRR
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHH
VIFPGALPSIFVGLRFALGIMWLTLIVAETIAASSGLGYMAMQAREFMQIDVVVLSILIY
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALLGKVADSASRLLERLTLSWHPAFSKH
HHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]