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The map label for this gene is glxC [H]

Identifier: 146342717

GI number: 146342717

Start: 6105304

End: 6105987

Strand: Reverse

Name: glxC [H]

Synonym: BRADO5884

Alternate gene names: 146342717

Gene position: 6105987-6105304 (Counterclockwise)

Preceding gene: 146342718

Following gene: 146342716

Centisome position: 81.89

GC content: 65.94

Gene sequence:

>684_bases
ATGCCGAGCTTTGACTTGGCGACTGCGCCGTTGCGCGAGCTGAACGCCGCACTGCATGCGCTCTCGCCCGATACCAACGA
GACGCACTGGGTGGTCAGCAATCCCTCCGGCAAGCATGCGCTCGCCTGCGGGCTCGATGCGCCCGTCACCGTCGAGATCG
ACGGTCATGTCGGCTACTATTGCGCCGGCATGAACAAGAACGCGACCGTCGTGATCTCCGGCAATGCCGGCGTCGGCGTC
GCCGAGAACATGATGTCGGGCGAGGTCCGCGTCAAAGGCGATGCCAGCCAGTCGGCGGGCGCGACCGGCTGCGGTGGGTT
GCTGGTGATCGAGGGCAACGCCTCGGCACGCTGCGGCATCTCCATGAAGGGCATCGACATCGTCGTGAAGGGCTCGATCG
GACCGATGAGCGCGTTCATGGCGCAGGCCGGCAATCTCGTCGTTCTCGGCGATGCCGGCGATGCGCTCGGCGATTCCATC
TACGAGGCCCGGCTGTTCGTGCGTGGCCGCGTCGCGAGCCTCGGCGCCGACTGCATCGAGAAGCCGATGACGGAGGAGGA
TCGCGCGATCCTTGCCGCCGTGCTCAAGCGCGCGGGCGTCGATGCAAGCGCCGGCGAATTCAAGCTCTACGGCTCGGCGC
GGCGCCTCTATCACTTCCACATCGACAATGTCGACGCTTACTGA

Upstream 100 bases:

>100_bases
TCGGCTCGGAATATCGCGCATTGGCGATGCTGCCTGGCGTCGACAAAGCGCACATCTTCGAGCCCGAGCCGGCCACGGTC
TACGTCTGGGAGCGTGGCTG

Downstream 100 bases:

>100_bases
GGCTATCACGATGTCCGCGCCTCCACATCGCACCCCGCCGCGCTTCTCAGCGACCTTCAACCCGAGCGTCATTGCCGAGA
TCCAGCGCGCCGCGGCAACC

Product: glutamate synthase subunit alpha domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MPSFDLATAPLRELNAALHALSPDTNETHWVVSNPSGKHALACGLDAPVTVEIDGHVGYYCAGMNKNATVVISGNAGVGV
AENMMSGEVRVKGDASQSAGATGCGGLLVIEGNASARCGISMKGIDIVVKGSIGPMSAFMAQAGNLVVLGDAGDALGDSI
YEARLFVRGRVASLGADCIEKPMTEEDRAILAAVLKRAGVDASAGEFKLYGSARRLYHFHIDNVDAY

Sequences:

>Translated_227_residues
MPSFDLATAPLRELNAALHALSPDTNETHWVVSNPSGKHALACGLDAPVTVEIDGHVGYYCAGMNKNATVVISGNAGVGV
AENMMSGEVRVKGDASQSAGATGCGGLLVIEGNASARCGISMKGIDIVVKGSIGPMSAFMAQAGNLVVLGDAGDALGDSI
YEARLFVRGRVASLGADCIEKPMTEEDRAILAAVLKRAGVDASAGEFKLYGSARRLYHFHIDNVDAY
>Mature_226_residues
PSFDLATAPLRELNAALHALSPDTNETHWVVSNPSGKHALACGLDAPVTVEIDGHVGYYCAGMNKNATVVISGNAGVGVA
ENMMSGEVRVKGDASQSAGATGCGGLLVIEGNASARCGISMKGIDIVVKGSIGPMSAFMAQAGNLVVLGDAGDALGDSIY
EARLFVRGRVASLGADCIEKPMTEEDRAILAAVLKRAGVDASAGEFKLYGSARRLYHFHIDNVDAY

Specific function: Unknown

COG id: COG0070

COG function: function code E; Glutamate synthase domain 3

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fwdC/fmdC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002489
- InterPro:   IPR012061 [H]

Pfam domain/function: PF01493 GXGXG [H]

EC number: NA

Molecular weight: Translated: 23411; Mature: 23280

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFDLATAPLRELNAALHALSPDTNETHWVVSNPSGKHALACGLDAPVTVEIDGHVGYY
CCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCEEEE
CAGMNKNATVVISGNAGVGVAENMMSGEVRVKGDASQSAGATGCGGLLVIEGNASARCGI
EECCCCCEEEEEECCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEECE
SMKGIDIVVKGSIGPMSAFMAQAGNLVVLGDAGDALGDSIYEARLFVRGRVASLGADCIE
EECCEEEEEECCCCHHHHHHHCCCCEEEEECCCCHHHHHHHEEEEEEECCHHHCCHHHHH
KPMTEEDRAILAAVLKRAGVDASAGEFKLYGSARRLYHFHIDNVDAY
CCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECEEEEEEEEECCCCCC
>Mature Secondary Structure 
PSFDLATAPLRELNAALHALSPDTNETHWVVSNPSGKHALACGLDAPVTVEIDGHVGYY
CCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCEEEE
CAGMNKNATVVISGNAGVGVAENMMSGEVRVKGDASQSAGATGCGGLLVIEGNASARCGI
EECCCCCEEEEEECCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEECE
SMKGIDIVVKGSIGPMSAFMAQAGNLVVLGDAGDALGDSIYEARLFVRGRVASLGADCIE
EECCEEEEEECCCCHHHHHHHCCCCEEEEECCCCHHHHHHHEEEEEEECCHHHCCHHHHH
KPMTEEDRAILAAVLKRAGVDASAGEFKLYGSARRLYHFHIDNVDAY
CCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]