| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342679
Identifier: 146342679
GI number: 146342679
Start: 6063415
End: 6064080
Strand: Direct
Name: 146342679
Synonym: BRADO5846
Alternate gene names: NA
Gene position: 6063415-6064080 (Clockwise)
Preceding gene: 146342678
Following gene: 146342692
Centisome position: 81.32
GC content: 56.76
Gene sequence:
>666_bases TTGAGCGGCTGGCGTAGACTTCTTGGGCGAACACTCGACGGGCTCCAGGACCTCAAGCAGCAGGGCCTGCCGGCTCCAGA ATGGGTGCTGGGCGGCGGCACCGCCCTCATGCTTCATGCGAACCACCGGCTGAGCCGGGACATCGACGCGTTCATCGACG ACCCGCAGTATCTTGCCTTGCTATCGCCTGAGATCACGGACGTGTGGAACTGCGCTGATTGGGACAAGGCCGCCCACTAT CTCAAACTCAAATATCCAGAGGGCGAGATCGACTTTATCGTCAGCGGCGCCCTCTCGGATCTTGAGCCAGTCGAGAAAGA GATCGACCTGACGTCGATTCGGACGGGCTGGAAGTCAACGATCATGGTTGAGCCGCCAACGGAGATCGCGCTCAAGAAGA TGTACCATCGGGCGACGATGCTGAAGCCTCGCGACATCTTCGACATCACAGTCATCAAAAAGATCGACAGCGTCTCCCTC ACCAAAAACTTGAATGCAGTTGCTTCGAAAAAGAACGACCTCCTTCGTCGCGTCAATAGTATCCGCGTCGACTACCTCAA AGCAGACCTCGCAGAGCTCGACATCCAACCTGGATGGGAGCACGAACAAGAAACATGCCTCGAAACCGTTCGCGAACTCG TGGAGCAGATTTCAAAAGCCGGCTAG
Upstream 100 bases:
>100_bases TTCGCCCGGCTTCACGCTATTCCCATTCGAGACCTCGCGGCCTCATATCGATCGATGAAGTCGGCCACAGGCGAAAGCAA CCCGGCATTGGAGCGCGCGC
Downstream 100 bases:
>100_bases CTGCACGATACGAGAACAAAGGCTTGAATTGGCTTCTGCATCCGCACCAGTTTCGCACCAGAAACGATCGCATCAAAACA CAACGGATGCGATCGAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSGWRRLLGRTLDGLQDLKQQGLPAPEWVLGGGTALMLHANHRLSRDIDAFIDDPQYLALLSPEITDVWNCADWDKAAHY LKLKYPEGEIDFIVSGALSDLEPVEKEIDLTSIRTGWKSTIMVEPPTEIALKKMYHRATMLKPRDIFDITVIKKIDSVSL TKNLNAVASKKNDLLRRVNSIRVDYLKADLAELDIQPGWEHEQETCLETVRELVEQISKAG
Sequences:
>Translated_221_residues MSGWRRLLGRTLDGLQDLKQQGLPAPEWVLGGGTALMLHANHRLSRDIDAFIDDPQYLALLSPEITDVWNCADWDKAAHY LKLKYPEGEIDFIVSGALSDLEPVEKEIDLTSIRTGWKSTIMVEPPTEIALKKMYHRATMLKPRDIFDITVIKKIDSVSL TKNLNAVASKKNDLLRRVNSIRVDYLKADLAELDIQPGWEHEQETCLETVRELVEQISKAG >Mature_220_residues SGWRRLLGRTLDGLQDLKQQGLPAPEWVLGGGTALMLHANHRLSRDIDAFIDDPQYLALLSPEITDVWNCADWDKAAHYL KLKYPEGEIDFIVSGALSDLEPVEKEIDLTSIRTGWKSTIMVEPPTEIALKKMYHRATMLKPRDIFDITVIKKIDSVSLT KNLNAVASKKNDLLRRVNSIRVDYLKADLAELDIQPGWEHEQETCLETVRELVEQISKAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25033; Mature: 24902
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGWRRLLGRTLDGLQDLKQQGLPAPEWVLGGGTALMLHANHRLSRDIDAFIDDPQYLAL CCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECCCHHHHHHHHHHCCCCEEEE LSPEITDVWNCADWDKAAHYLKLKYPEGEIDFIVSGALSDLEPVEKEIDLTSIRTGWKST ECCCHHHHCCCCCHHHHCCEEEEECCCCCEEEEEECCHHHHHHHHHHCCHHHHCCCCCCE IMVEPPTEIALKKMYHRATMLKPRDIFDITVIKKIDSVSLTKNLNAVASKKNDLLRRVNS EEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH IRVDYLKADLAELDIQPGWEHEQETCLETVRELVEQISKAG HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SGWRRLLGRTLDGLQDLKQQGLPAPEWVLGGGTALMLHANHRLSRDIDAFIDDPQYLAL CHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECCCHHHHHHHHHHCCCCEEEE LSPEITDVWNCADWDKAAHYLKLKYPEGEIDFIVSGALSDLEPVEKEIDLTSIRTGWKST ECCCHHHHCCCCCHHHHCCEEEEECCCCCEEEEEECCHHHHHHHHHHCCHHHHCCCCCCE IMVEPPTEIALKKMYHRATMLKPRDIFDITVIKKIDSVSLTKNLNAVASKKNDLLRRVNS EEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH IRVDYLKADLAELDIQPGWEHEQETCLETVRELVEQISKAG HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA