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The map label for this gene is 146342657

Identifier: 146342657

GI number: 146342657

Start: 6040996

End: 6041874

Strand: Direct

Name: 146342657

Synonym: BRADO5824

Alternate gene names: NA

Gene position: 6040996-6041874 (Clockwise)

Preceding gene: 146342655

Following gene: 146342666

Centisome position: 81.02

GC content: 64.73

Gene sequence:

>879_bases
ATGGCCCCCCGCGCCTATTGGAAAGGCTCGCTCAAACTCTCGCTCGTCACTTGCCCCGTCGTGCTCTATCCGGCGTCGAC
CTCGGTGGAGAAGACGCGCTTTCACCTGATCAACCGCGAGACCGGCAACCGGCTGAAGCAGCAGATGATCGATGCCGAGA
CCGGTGACCTCGTCGAGGGCGATCAGAAGGGCCGCGGCTACGAACTATCCAAGGGGCAATATGTCGAGATCGAGCCGGAG
GAGCTGGAGGCCGTCCAGATCGAGAGCAACCACACCATCGACATCGACAGCTTCGTGCCGCGCGAGGAGATCGACCAGCG
CTATCTCAACCACCCCTACTACATCGCTCCCGACGGCAAGGCGGCGGTCGATGCCTTTGCGGTGATCCGCGACGCGATGA
AGGACCAGGACCGCGTCGCGCTGGCGCGCATCGTGCTGACGCATCGCGAGCACGTCATTGCGATCGAGCCGATGGGCAAG
GGCATGCTCGGCACCACCTTGCGCTTCCCCTATGAGCTGCGCGACGAAGCGGAGTTCTTCGACGACATCAAGGCGCCGAA
GATCACCAAGGACATGGTGGAGCTCGCCGGACACATCCTGCAGACCAAGGCGGCGCACTTCAAGCCGTCGGAGTTCAAGG
ACCAGTACGAGACCGCGCTGAAGGCGCTGGTGAAACGCAAGGCCTCGGGCAAGCCGATCAAGCTGCCGGAGCCCGAGGAG
CGGTCCGGCAATGTCGTGAGCCTGATGGATGCGCTGAAGCAGAGCCTGGGCAAGGGCGACAAGAAGGCGGCACCGGCGCC
ATCGCGGCGTGCGCCTGCGCATCGGCGTCCGGCGAAGAAGGCGCACCGCTCGGCGGCGCGGCAGAGGAAAGCGGGGTGA

Upstream 100 bases:

>100_bases
AGGCGGCGCATCCCGGGTAACTGCTCCAAGCTGCTGCACATGGAACCGCCGCGACGGCTCATCCGTTGCAGCGCCGTCCC
ACTCGCTCTCGGAGATCACA

Downstream 100 bases:

>100_bases
GGAATCCGTAGCCGGATGAGCGCAGCGACATCCGGGTTCACGTGTATCGTTCGTGAGAACCCGGATGTCGCGCCGCTAAT
CCTGGCTAAAAATCGCTTGG

Product: putative Ku protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MAPRAYWKGSLKLSLVTCPVVLYPASTSVEKTRFHLINRETGNRLKQQMIDAETGDLVEGDQKGRGYELSKGQYVEIEPE
ELEAVQIESNHTIDIDSFVPREEIDQRYLNHPYYIAPDGKAAVDAFAVIRDAMKDQDRVALARIVLTHREHVIAIEPMGK
GMLGTTLRFPYELRDEAEFFDDIKAPKITKDMVELAGHILQTKAAHFKPSEFKDQYETALKALVKRKASGKPIKLPEPEE
RSGNVVSLMDALKQSLGKGDKKAAPAPSRRAPAHRRPAKKAHRSAARQRKAG

Sequences:

>Translated_292_residues
MAPRAYWKGSLKLSLVTCPVVLYPASTSVEKTRFHLINRETGNRLKQQMIDAETGDLVEGDQKGRGYELSKGQYVEIEPE
ELEAVQIESNHTIDIDSFVPREEIDQRYLNHPYYIAPDGKAAVDAFAVIRDAMKDQDRVALARIVLTHREHVIAIEPMGK
GMLGTTLRFPYELRDEAEFFDDIKAPKITKDMVELAGHILQTKAAHFKPSEFKDQYETALKALVKRKASGKPIKLPEPEE
RSGNVVSLMDALKQSLGKGDKKAAPAPSRRAPAHRRPAKKAHRSAARQRKAG
>Mature_291_residues
APRAYWKGSLKLSLVTCPVVLYPASTSVEKTRFHLINRETGNRLKQQMIDAETGDLVEGDQKGRGYELSKGQYVEIEPEE
LEAVQIESNHTIDIDSFVPREEIDQRYLNHPYYIAPDGKAAVDAFAVIRDAMKDQDRVALARIVLTHREHVIAIEPMGKG
MLGTTLRFPYELRDEAEFFDDIKAPKITKDMVELAGHILQTKAAHFKPSEFKDQYETALKALVKRKASGKPIKLPEPEER
SGNVVSLMDALKQSLGKGDKKAAPAPSRRAPAHRRPAKKAHRSAARQRKAG

Specific function: Could be involved in DNA repair

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y5824_BRASO (A4Z012)

Other databases:

- EMBL:   CU234118
- RefSeq:   YP_001207705.1
- STRING:   A4Z012
- GeneID:   5120230
- GenomeReviews:   CU234118_GR
- KEGG:   bra:BRADO5824
- eggNOG:   COG1273
- HOGENOM:   HBG492008
- OMA:   RLKQQMI
- ProtClustDB:   CLSK820290
- BioCyc:   BSP376:BRADO5824-MONOMER
- HAMAP:   MF_01875
- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194
- PIRSF:   PIRSF006493
- TIGRFAMs:   TIGR02772

Pfam domain/function: PF02735 Ku; SSF100939 SPOC-like

EC number: NA

Molecular weight: Translated: 32748; Mature: 32617

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRAYWKGSLKLSLVTCPVVLYPASTSVEKTRFHLINRETGNRLKQQMIDAETGDLVEG
CCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC
DQKGRGYELSKGQYVEIEPEELEAVQIESNHTIDIDSFVPREEIDQRYLNHPYYIAPDGK
CCCCCCEECCCCCEEEECHHHCEEEEECCCCEEEHHCCCCHHHHHHHHCCCCEEECCCCH
AAVDAFAVIRDAMKDQDRVALARIVLTHREHVIAIEPMGKGMLGTTLRFPYELRDEAEFF
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEECCHHHHHHHHHH
DDIKAPKITKDMVELAGHILQTKAAHFKPSEFKDQYETALKALVKRKASGKPIKLPEPEE
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RSGNVVSLMDALKQSLGKGDKKAAPAPSRRAPAHRRPAKKAHRSAARQRKAG
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
APRAYWKGSLKLSLVTCPVVLYPASTSVEKTRFHLINRETGNRLKQQMIDAETGDLVEG
CCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC
DQKGRGYELSKGQYVEIEPEELEAVQIESNHTIDIDSFVPREEIDQRYLNHPYYIAPDGK
CCCCCCEECCCCCEEEECHHHCEEEEECCCCEEEHHCCCCHHHHHHHHCCCCEEECCCCH
AAVDAFAVIRDAMKDQDRVALARIVLTHREHVIAIEPMGKGMLGTTLRFPYELRDEAEFF
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEECCHHHHHHHHHH
DDIKAPKITKDMVELAGHILQTKAAHFKPSEFKDQYETALKALVKRKASGKPIKLPEPEE
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RSGNVVSLMDALKQSLGKGDKKAAPAPSRRAPAHRRPAKKAHRSAARQRKAG
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA