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The map label for this gene is ycgB [H]

Identifier: 146342639

GI number: 146342639

Start: 6007324

End: 6008862

Strand: Reverse

Name: ycgB [H]

Synonym: BRADO5804

Alternate gene names: 146342639

Gene position: 6008862-6007324 (Counterclockwise)

Preceding gene: 146342640

Following gene: 146342638

Centisome position: 80.58

GC content: 62.9

Gene sequence:

>1539_bases
ATGAGCGGATTGCTGTTCGAAGGCGCCGACTGGAATTTCCTCACCCTGCAGCGCATCCACGATGCCTGCGAGACCGTGGC
GCAGAAGGAGCTCGGGCTCGATACCTATCCGAACCAGATCGAGGTCATCACCGCCGAGCAGATGCTCGACGCCTATTCCT
CGGTCGGCATGCCCCTGTTCTACAAGCACTGGTCGTTCGGCAAGCACTTCGCCTATCACGAGGCATCGTACCGCAAGGGC
CTGATGGGTCTCGCCTATGAGATCGTGATCAACTCCTCGCCCTGCATCTCCTATCTGATGGAAGAGAACACGGCGACGAT
GCAGACCTTGGTCATCGCGCATGCTGCGTTCGGCCACAACCATTTCTTCAAGAACAACTATTTGTTCAAGCAGTGGACCG
ATGCCGACGGCATCCTCGATTATCTCGATTTCGCCCGCGGCTATATCGCGCAATGCGAGGAGCGGTTCGGCCGCATGGCG
GTCGAGCACACGCTCGACGCCGCGCATGCGCTGATGTCGCACGGAGTCGACCGCTATCCCGGCAAGAAGAAGCTCGACTT
CCGCGAGGAGGAGAAGCGCGCCGGCAAGCGCAGGCTCTACGAGGAGGAGCAGTTCAACGATCTCTGGCGCACCGTGCCGA
CCGGACCCGCCAAGACCAGCGCGGTGCTGAACGTGGAGCGCCGGCGTGCGCTGCTCGGCCTGCCGCAGGAGAACCTGCTC
TACTTCCTGGAAAAGAGTGCGCCGCGGCTGGCGCCGTGGCAGCGCGAGCTGCTGCGCATCGTCCGCCACATCGCGCAGTA
TTTCTATCCGCAGGGCCAGACCAAGGTCATGAACGAGGGCACGGCAACCTACGTGCACTACCGCATCATGAAGCGGCTGC
ATGAGGAGGGCCGTCTCACCGACGGCAACTTTCTGGAGTTCCTGCAGTCGCACACCAACGTGGTGTTCCAGCCGGAGTTC
GACGATCCGCGCTTCTCCGGCTTCAATCCTTACGCGCTCGGCTTCGCGATCATGCAGGACATCGAGCGCATCGTGAAGGA
TCCGACCGAGGAGGACCGCGAGTGGTTCCCGGACATCGCCGGCACCGGCGACGAGATGGCGGTGCTGCGCGACGTCTGGG
CCAATTATCGCGACGAGAGCTTCATCAGCCAGTTCCTCAGCCCGAACCTGATCCGCCACTTCCGGCTGTTCCACCTGCAT
GATGATCCGGCCGAGCGCGCCGGCATCCTGGTCGACGCCATCCATGACGAGCGCGGCTATCGCCGCATCCGCCGCGAGCT
GTCGAAGCAGTACGATGTCGGGTACATCGACCCGAACATCGAGGTGGTCGACGTCGACCTCGCCGGCGACCGCCGCCTGA
TGCTGCGGCATACGGTGGTGAAGGGCGCGCAGCTGAATGAGACCGATACGAAGCGCGTGCTGCAGCACCTCGCCGATCTC
TGGAGCTACGACGTCCAGCTCACCGAGGTCGACGCCGCCACCGACAAGGTGCTGAAGGAGTACGTGCTCAATCCCCGGAT
ACAACCGGCGGCCGCGTAG

Upstream 100 bases:

>100_bases
AGCCGCTGTCGATGCGCAAGGTGCGCGACCGCAGCGAGATCTTCCCGGTGTTCCATGACCTGTTTCAGCGTCGCGGCACC
ACGCAGGAGAGGGCGGCCTC

Downstream 100 bases:

>100_bases
CGCGGCCGCCAGGGGGTAGACAGGTTTGAGTTTTGGACAGTCGAACCTTCGATTATGTGAGCCGGGCTGTCAGCACGTGG
ACGGTGCGCTCCCCTCCCCC

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MSGLLFEGADWNFLTLQRIHDACETVAQKELGLDTYPNQIEVITAEQMLDAYSSVGMPLFYKHWSFGKHFAYHEASYRKG
LMGLAYEIVINSSPCISYLMEENTATMQTLVIAHAAFGHNHFFKNNYLFKQWTDADGILDYLDFARGYIAQCEERFGRMA
VEHTLDAAHALMSHGVDRYPGKKKLDFREEEKRAGKRRLYEEEQFNDLWRTVPTGPAKTSAVLNVERRRALLGLPQENLL
YFLEKSAPRLAPWQRELLRIVRHIAQYFYPQGQTKVMNEGTATYVHYRIMKRLHEEGRLTDGNFLEFLQSHTNVVFQPEF
DDPRFSGFNPYALGFAIMQDIERIVKDPTEEDREWFPDIAGTGDEMAVLRDVWANYRDESFISQFLSPNLIRHFRLFHLH
DDPAERAGILVDAIHDERGYRRIRRELSKQYDVGYIDPNIEVVDVDLAGDRRLMLRHTVVKGAQLNETDTKRVLQHLADL
WSYDVQLTEVDAATDKVLKEYVLNPRIQPAAA

Sequences:

>Translated_512_residues
MSGLLFEGADWNFLTLQRIHDACETVAQKELGLDTYPNQIEVITAEQMLDAYSSVGMPLFYKHWSFGKHFAYHEASYRKG
LMGLAYEIVINSSPCISYLMEENTATMQTLVIAHAAFGHNHFFKNNYLFKQWTDADGILDYLDFARGYIAQCEERFGRMA
VEHTLDAAHALMSHGVDRYPGKKKLDFREEEKRAGKRRLYEEEQFNDLWRTVPTGPAKTSAVLNVERRRALLGLPQENLL
YFLEKSAPRLAPWQRELLRIVRHIAQYFYPQGQTKVMNEGTATYVHYRIMKRLHEEGRLTDGNFLEFLQSHTNVVFQPEF
DDPRFSGFNPYALGFAIMQDIERIVKDPTEEDREWFPDIAGTGDEMAVLRDVWANYRDESFISQFLSPNLIRHFRLFHLH
DDPAERAGILVDAIHDERGYRRIRRELSKQYDVGYIDPNIEVVDVDLAGDRRLMLRHTVVKGAQLNETDTKRVLQHLADL
WSYDVQLTEVDAATDKVLKEYVLNPRIQPAAA
>Mature_511_residues
SGLLFEGADWNFLTLQRIHDACETVAQKELGLDTYPNQIEVITAEQMLDAYSSVGMPLFYKHWSFGKHFAYHEASYRKGL
MGLAYEIVINSSPCISYLMEENTATMQTLVIAHAAFGHNHFFKNNYLFKQWTDADGILDYLDFARGYIAQCEERFGRMAV
EHTLDAAHALMSHGVDRYPGKKKLDFREEEKRAGKRRLYEEEQFNDLWRTVPTGPAKTSAVLNVERRRALLGLPQENLLY
FLEKSAPRLAPWQRELLRIVRHIAQYFYPQGQTKVMNEGTATYVHYRIMKRLHEEGRLTDGNFLEFLQSHTNVVFQPEFD
DPRFSGFNPYALGFAIMQDIERIVKDPTEEDREWFPDIAGTGDEMAVLRDVWANYRDESFISQFLSPNLIRHFRLFHLHD
DPAERAGILVDAIHDERGYRRIRRELSKQYDVGYIDPNIEVVDVDLAGDRRLMLRHTVVKGAQLNETDTKRVLQHLADLW
SYDVQLTEVDAATDKVLKEYVLNPRIQPAAA

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=486, Percent_Identity=55.761316872428, Blast_Score=530, Evalue=1e-151,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 59455; Mature: 59324

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLLFEGADWNFLTLQRIHDACETVAQKELGLDTYPNQIEVITAEQMLDAYSSVGMPLF
CCCCEECCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCCCCE
YKHWSFGKHFAYHEASYRKGLMGLAYEIVINSSPCISYLMEENTATMQTLVIAHAAFGHN
ECCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHCCC
HFFKNNYLFKQWTDADGILDYLDFARGYIAQCEERFGRMAVEHTLDAAHALMSHGVDRYP
CEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GKKKLDFREEEKRAGKRRLYEEEQFNDLWRTVPTGPAKTSAVLNVERRRALLGLPQENLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
YFLEKSAPRLAPWQRELLRIVRHIAQYFYPQGQTKVMNEGTATYVHYRIMKRLHEEGRLT
HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCC
DGNFLEFLQSHTNVVFQPEFDDPRFSGFNPYALGFAIMQDIERIVKDPTEEDREWFPDIA
CCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
GTGDEMAVLRDVWANYRDESFISQFLSPNLIRHFRLFHLHDDPAERAGILVDAIHDERGY
CCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHEEECCCHHHHHCEEEEHHHCHHHH
RRIRRELSKQYDVGYIDPNIEVVDVDLAGDRRLMLRHTVVKGAQLNETDTKRVLQHLADL
HHHHHHHHHHCCCEEECCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
WSYDVQLTEVDAATDKVLKEYVLNPRIQPAAA
HHCCCEEEECHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SGLLFEGADWNFLTLQRIHDACETVAQKELGLDTYPNQIEVITAEQMLDAYSSVGMPLF
CCCEECCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCCCCE
YKHWSFGKHFAYHEASYRKGLMGLAYEIVINSSPCISYLMEENTATMQTLVIAHAAFGHN
ECCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHCCC
HFFKNNYLFKQWTDADGILDYLDFARGYIAQCEERFGRMAVEHTLDAAHALMSHGVDRYP
CEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GKKKLDFREEEKRAGKRRLYEEEQFNDLWRTVPTGPAKTSAVLNVERRRALLGLPQENLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
YFLEKSAPRLAPWQRELLRIVRHIAQYFYPQGQTKVMNEGTATYVHYRIMKRLHEEGRLT
HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCC
DGNFLEFLQSHTNVVFQPEFDDPRFSGFNPYALGFAIMQDIERIVKDPTEEDREWFPDIA
CCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
GTGDEMAVLRDVWANYRDESFISQFLSPNLIRHFRLFHLHDDPAERAGILVDAIHDERGY
CCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHEEECCCHHHHHCEEEEHHHCHHHH
RRIRRELSKQYDVGYIDPNIEVVDVDLAGDRRLMLRHTVVKGAQLNETDTKRVLQHLADL
HHHHHHHHHHCCCEEECCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
WSYDVQLTEVDAATDKVLKEYVLNPRIQPAAA
HHCCCEEEECHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]