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The map label for this gene is pqqD [H]

Identifier: 146342631

GI number: 146342631

Start: 5996896

End: 5997204

Strand: Direct

Name: pqqD [H]

Synonym: BRADO5796

Alternate gene names: 146342631

Gene position: 5996896-5997204 (Clockwise)

Preceding gene: 146342630

Following gene: 146342632

Centisome position: 80.42

GC content: 66.02

Gene sequence:

>309_bases
ATGGCCCCGCGTCACATCCAGGTCACCGAAACCAGCCGCGTGGTGCTGCCGCGGCATACCAAGCTGAAGTATGACGAGAC
GCGGCAGGTCTGGGTGATCCTGGCCCCGGAGCGGGTGCTGGCGCCGGATGAGATCGCGGTCGAGGTGCTCCAGCTGTGCG
ACGGCGCGCGCAGCGTCGCCGGTATCATCGACGAGCTCGCGGCAAAGTATGCCGCGCCGCGCGACGTCATTGCCACCGAT
GTCGTCGCCATGCTGCAGGATCTCGCCGACAAGGGCTTTCTCACCGAGGTTCGGGAGACGACATCATGA

Upstream 100 bases:

>100_bases
CCACCCCCGCCCCCCCCCCCCCGCAAGGGGGAGGGGAGTCGTATCGCGAACTGCGCAGCCACTGTGCTCCTACAAGATCA
AACGCCTTAGAGACCCCACC

Downstream 100 bases:

>100_bases
CCGAGCTGACAGACACCACTGCGCAGATCGATAGCAATGACGGCCTCGCCGTGCTGGAGCGCCGCGGCTCCGTCGCCGAG
ACCTTCGGCATTCCGCTCGC

Product: coenzyme PQQ synthesis protein D

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein D [H]

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MAPRHIQVTETSRVVLPRHTKLKYDETRQVWVILAPERVLAPDEIAVEVLQLCDGARSVAGIIDELAAKYAAPRDVIATD
VVAMLQDLADKGFLTEVRETTS

Sequences:

>Translated_102_residues
MAPRHIQVTETSRVVLPRHTKLKYDETRQVWVILAPERVLAPDEIAVEVLQLCDGARSVAGIIDELAAKYAAPRDVIATD
VVAMLQDLADKGFLTEVRETTS
>Mature_101_residues
APRHIQVTETSRVVLPRHTKLKYDETRQVWVILAPERVLAPDEIAVEVLQLCDGARSVAGIIDELAAKYAAPRDVIATDV
VAMLQDLADKGFLTEVRETTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008792
- InterPro:   IPR022479 [H]

Pfam domain/function: PF05402 PqqD [H]

EC number: NA

Molecular weight: Translated: 11296; Mature: 11165

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRHIQVTETSRVVLPRHTKLKYDETRQVWVILAPERVLAPDEIAVEVLQLCDGARSVA
CCCCCEEEECCCEEECCCCCCCCCCCCCEEEEEECCCHHCCCHHHHHHHHHHCCCHHHHH
GIIDELAAKYAAPRDVIATDVVAMLQDLADKGFLTEVRETTS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
>Mature Secondary Structure 
APRHIQVTETSRVVLPRHTKLKYDETRQVWVILAPERVLAPDEIAVEVLQLCDGARSVA
CCCCEEEECCCEEECCCCCCCCCCCCCEEEEEECCCHHCCCHHHHHHHHHHCCCHHHHH
GIIDELAAKYAAPRDVIATDVVAMLQDLADKGFLTEVRETTS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]