Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is gstA [H]
Identifier: 146342555
GI number: 146342555
Start: 5918797
End: 5919417
Strand: Reverse
Name: gstA [H]
Synonym: BRADO5718
Alternate gene names: 146342555
Gene position: 5919417-5918797 (Counterclockwise)
Preceding gene: 146342557
Following gene: 146342545
Centisome position: 79.39
GC content: 70.05
Gene sequence:
>621_bases ATGTCGCAACGCCGCCTTTATCATTTCGCCCTGTCCGGCCATGCGCATCGCGCGCGGCTGATGCTGAGCCTGCTCGGCCT GCCGTGCGAGCTCGTCGATGTCGATCTCCCGGGCGGCGCGCAGAAGCAGCCGGATTTCCTGGCCCTGAATCCGTTCGGCC AGGTGCCGGTGCTGGTCGACGGCGATGCCGTGATCCCCGACTCCAATGCGATCCTGGTCTATCTTGCCGGGCGCTACGAT CCGGCTGGCCGGTGGTGGCCGCGCGATCCCTTGGGACAGGCGCAGGTCCAGCGCTGGCTGTCGGCGGCAGCCGGGCCGCT GGCGTTCGGTGCGGCGGCGGCGCGGATCGCGACCTTGTTCGGCGCGCCGCTCGACATGGCGAGGGCGCACCAGATCGCCA ACAACCTGTTTGCGGTGATGGAGCGCGAGCTTGGCGTCCGGCCGTTTCTCACCGGCGAGACACCGACGATCGCCGATGTC GCGCTCTATAGCTACACCGCGCACGCGCCCGAGGGCGGCGTGTCGCTGACGCCCTATCCGAACGTCGGGGCGTGGCTGGC GCGGATCGCCGATCTGCCCGGCTTCGTGCCGATGCAGGCGAGCGCGGTCAGGGCCGCCTGA
Upstream 100 bases:
>100_bases GTCGCATTATTGCGCCGGTCGCAACAAGCCATTGATGGCGGCCGGCGTTGTTGATCTGTCAGCCCGGCGCTACACGTCGC TCCAGCAACGGGAGCCCATC
Downstream 100 bases:
>100_bases CCGCCACGCACGATGGCGTGCGAACGCCGCTTACAGGAAGCAGCGGCGCTCGTCGCGCAGCTTGAGCTGGATGTTGGTGG CTTCGACGAAGGTCGACACC
Product: putative glutathione S-transferase (gstA/gst-like)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSQRRLYHFALSGHAHRARLMLSLLGLPCELVDVDLPGGAQKQPDFLALNPFGQVPVLVDGDAVIPDSNAILVYLAGRYD PAGRWWPRDPLGQAQVQRWLSAAAGPLAFGAAAARIATLFGAPLDMARAHQIANNLFAVMERELGVRPFLTGETPTIADV ALYSYTAHAPEGGVSLTPYPNVGAWLARIADLPGFVPMQASAVRAA
Sequences:
>Translated_206_residues MSQRRLYHFALSGHAHRARLMLSLLGLPCELVDVDLPGGAQKQPDFLALNPFGQVPVLVDGDAVIPDSNAILVYLAGRYD PAGRWWPRDPLGQAQVQRWLSAAAGPLAFGAAAARIATLFGAPLDMARAHQIANNLFAVMERELGVRPFLTGETPTIADV ALYSYTAHAPEGGVSLTPYPNVGAWLARIADLPGFVPMQASAVRAA >Mature_205_residues SQRRLYHFALSGHAHRARLMLSLLGLPCELVDVDLPGGAQKQPDFLALNPFGQVPVLVDGDAVIPDSNAILVYLAGRYDP AGRWWPRDPLGQAQVQRWLSAAAGPLAFGAAAARIATLFGAPLDMARAHQIANNLFAVMERELGVRPFLTGETPTIADVA LYSYTAHAPEGGVSLTPYPNVGAWLARIADLPGFVPMQASAVRAA
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI4504187, Length=178, Percent_Identity=30.8988764044944, Blast_Score=81, Evalue=5e-16, Organism=Homo sapiens, GI124249394, Length=178, Percent_Identity=30.8988764044944, Blast_Score=81, Evalue=5e-16, Organism=Homo sapiens, GI22202624, Length=197, Percent_Identity=31.4720812182741, Blast_Score=74, Evalue=8e-14, Organism=Escherichia coli, GI1788640, Length=201, Percent_Identity=28.8557213930348, Blast_Score=70, Evalue=8e-14, Organism=Escherichia coli, GI87081789, Length=162, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=2e-13, Organism=Drosophila melanogaster, GI24654965, Length=180, Percent_Identity=33.8888888888889, Blast_Score=93, Evalue=9e-20, Organism=Drosophila melanogaster, GI19922532, Length=190, Percent_Identity=32.6315789473684, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI19922160, Length=185, Percent_Identity=32.972972972973, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI24654979, Length=201, Percent_Identity=32.8358208955224, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI19922932, Length=199, Percent_Identity=30.6532663316583, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI19922528, Length=194, Percent_Identity=31.9587628865979, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI24654992, Length=198, Percent_Identity=30.8080808080808, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI20130115, Length=191, Percent_Identity=28.2722513089005, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24654983, Length=190, Percent_Identity=28.9473684210526, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI24646259, Length=192, Percent_Identity=30.7291666666667, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI221378983, Length=192, Percent_Identity=30.7291666666667, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI28571670, Length=184, Percent_Identity=27.7173913043478, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI19922526, Length=193, Percent_Identity=30.0518134715026, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI20129811, Length=199, Percent_Identity=28.1407035175879, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646251, Length=183, Percent_Identity=28.9617486338798, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI17933730, Length=189, Percent_Identity=25.9259259259259, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI17864594, Length=191, Percent_Identity=25.6544502617801, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI17864598, Length=191, Percent_Identity=26.1780104712042, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI17864596, Length=181, Percent_Identity=25.9668508287293, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24654996, Length=204, Percent_Identity=28.4313725490196, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 21989; Mature: 21857
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRRLYHFALSGHAHRARLMLSLLGLPCELVDVDLPGGAQKQPDFLALNPFGQVPVLVD CCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEECCCCCCCEEEC GDAVIPDSNAILVYLAGRYDPAGRWWPRDPLGQAQVQRWLSAAAGPLAFGAAAARIATLF CCEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH GAPLDMARAHQIANNLFAVMERELGVRPFLTGETPTIADVALYSYTAHAPEGGVSLTPYP CCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHEECCCCCCCEEECCCC NVGAWLARIADLPGFVPMQASAVRAA CHHHHHHHHHHCCCCCCCCCHHHCCC >Mature Secondary Structure SQRRLYHFALSGHAHRARLMLSLLGLPCELVDVDLPGGAQKQPDFLALNPFGQVPVLVD CCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEECCCCCCCEEEC GDAVIPDSNAILVYLAGRYDPAGRWWPRDPLGQAQVQRWLSAAAGPLAFGAAAARIATLF CCEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH GAPLDMARAHQIANNLFAVMERELGVRPFLTGETPTIADVALYSYTAHAPEGGVSLTPYP CCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHEECCCCCCCEEECCCC NVGAWLARIADLPGFVPMQASAVRAA CHHHHHHHHHHCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA