Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146342543
Identifier: 146342543
GI number: 146342543
Start: 5908250
End: 5908786
Strand: Reverse
Name: 146342543
Synonym: BRADO5705
Alternate gene names: NA
Gene position: 5908786-5908250 (Counterclockwise)
Preceding gene: 146342544
Following gene: 146342535
Centisome position: 79.24
GC content: 63.87
Gene sequence:
>537_bases ATGGTGATGAAGACTGTTGCGGCCGGCCTGGCCGGTTCCCTGCTGCTCGCGACCGCTGCCTTTGCCGCGGAGAGCACCAC CACGACGACCAGCACCACGGTCAAGAGCGACACCACCGCGGCATCGTATCAGGGCGACTGGCGCGCCTCGAAGCTCGTCG GCGTGAAGGTCTACAACAACAACAACGAGAACGTCGGCTCGATCGATGATATGCTCGTCGACAAGAGTGGCAACATCAAG GGCGTCGTGATCGGCGTCGGCGGCTTCCTCGGCATGGGCGAGCATCTCGTCGCCGTCTCGTTCGACCAGGTGAAGTTCTC GGATCAGCCGGTGCAGTCCACCACCGCCTCGAACGCGCCGGCCACCGGCACGACCTCCTCGACCAACCCGCCGGCCTCGA CCACGACGACCGGCGCCGCGACTTCGTCGTCCTCGTCGATGAGCTCCTCGAAGAACCGCTGGTATCCCGACCACGCGATG ATCAACGCGACCAAGGACCAGCTGAAGTCGATGCCGGAGTTCAAGTACTCCGAGTAA
Upstream 100 bases:
>100_bases GGGACCGGTTGTCGCGCAGCATGGCGAAATCGTGGTTCCCTGGGAACGCGGACTGTTCGTTGCAGTTCTCTCGTCACCAT TCACTGAGAGGAGAAACCAC
Downstream 100 bases:
>100_bases CGACGTCACCGACGATCGGTTGATTGTCTCGACGCGGCGCGCCCGGACCATCCGGGCGCGTTTGCGTATCAGGCCGCGGG GCGCAGCTTGCTCCGGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MVMKTVAAGLAGSLLLATAAFAAESTTTTTSTTVKSDTTAASYQGDWRASKLVGVKVYNNNNENVGSIDDMLVDKSGNIK GVVIGVGGFLGMGEHLVAVSFDQVKFSDQPVQSTTASNAPATGTTSSTNPPASTTTTGAATSSSSSMSSSKNRWYPDHAM INATKDQLKSMPEFKYSE
Sequences:
>Translated_178_residues MVMKTVAAGLAGSLLLATAAFAAESTTTTTSTTVKSDTTAASYQGDWRASKLVGVKVYNNNNENVGSIDDMLVDKSGNIK GVVIGVGGFLGMGEHLVAVSFDQVKFSDQPVQSTTASNAPATGTTSSTNPPASTTTTGAATSSSSSMSSSKNRWYPDHAM INATKDQLKSMPEFKYSE >Mature_178_residues MVMKTVAAGLAGSLLLATAAFAAESTTTTTSTTVKSDTTAASYQGDWRASKLVGVKVYNNNNENVGSIDDMLVDKSGNIK GVVIGVGGFLGMGEHLVAVSFDQVKFSDQPVQSTTASNAPATGTTSSTNPPASTTTTGAATSSSSSMSSSKNRWYPDHAM INATKDQLKSMPEFKYSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18421; Mature: 18421
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMKTVAAGLAGSLLLATAAFAAESTTTTTSTTVKSDTTAASYQGDWRASKLVGVKVYNN CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEEC NNENVGSIDDMLVDKSGNIKGVVIGVGGFLGMGEHLVAVSFDQVKFSDQPVQSTTASNAP CCCCCCCCHHEEECCCCCCCEEEEECCCCCCCCCEEEEEEECCEECCCCCCCCCCCCCCC ATGTTSSTNPPASTTTTGAATSSSSSMSSSKNRWYPDHAMINATKDQLKSMPEFKYSE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCHHHHHCCCCCCCCC >Mature Secondary Structure MVMKTVAAGLAGSLLLATAAFAAESTTTTTSTTVKSDTTAASYQGDWRASKLVGVKVYNN CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEEC NNENVGSIDDMLVDKSGNIKGVVIGVGGFLGMGEHLVAVSFDQVKFSDQPVQSTTASNAP CCCCCCCCHHEEECCCCCCCEEEEECCCCCCCCCEEEEEEECCEECCCCCCCCCCCCCCC ATGTTSSTNPPASTTTTGAATSSSSSMSSSKNRWYPDHAMINATKDQLKSMPEFKYSE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA