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The map label for this gene is yagR [H]

Identifier: 146342527

GI number: 146342527

Start: 5890286

End: 5892490

Strand: Reverse

Name: yagR [H]

Synonym: BRADO5689

Alternate gene names: 146342527

Gene position: 5892490-5890286 (Counterclockwise)

Preceding gene: 146342528

Following gene: 146342526

Centisome position: 79.02

GC content: 66.8

Gene sequence:

>2205_bases
ATGACAGCTCACATCGGCACCGCCACCTCCCGCGTCGACGGCCGCGCCAAGGTCACGGGTTCAGCCAAATACGCCGCCGA
GTTTTCCGCGCCCGATCTCGCCTTCGGCGTCGTGGTCAGCTCCACGATCCCCAAGGGGCGGATCGTCAGCATCGATGCCA
GCCGCGCCCGCGCCGTCGAGGGCGTGATCGACGTGCTGACTCACAGCAATCGCGTCCGCATGGCGGACAAGGACGACGGC
TACCGCGACGAGGTCGCGCCCGAGGATGGCTCGCCCTATCGTCCGCTCTACGACGACCGCGTGCATTTCAACCTCCAGCC
GGTCGCGCTGGTGATCGCCGAGGACGAGGACACGGCGCGCTTCGCCGCGACGCTGGTCGACATTCGCTACCACACCGAGG
ATTTCGCGACCGACCTGCATGCCCAGCGCGAACAGGCGTTCAAGGTCGACAAGCCGATCAAGCCGCGCGGCGATGCGACA
AAAGCGCTAGCCAGTGCGCCGGTGCGCCACGATGCCGACTATGGCGTGCCGATGGAGTATCACAATCCGATGGAACTCTA
CGGCTCGACCGTGCTCTGGCAGGACGGCGGCAGGCTCGTCGTCTACGACAAGACCCAGGGCGTGCAGAACGTGCAACGCT
ATGTCTGCAGCGTGTTCGAGCTGAAGGAGAACGACGTCCAGGTGATGTCGCCCTACGTGGGCGGCGCGTTCGGCTCGGGG
CTGCGGCCGCAATACCAGGTCGCGCTCGCGGCGATGGCCGCGCTGAAGCTCAAGCGTGCCGTGCGGGTCGTGCTCAGCCG
CGCCCAGATGTACGCGTTGTGCTACCGCCCCGCGACCATCGAGCGCCTGGCGCTGGGCGCCGCGAGCGACGGCGCGCTGA
AGGCGCTGACCCACGAAGCCATTTCGATGACCTCGCAGCACGAGGCGTTCTCGCGCAATGACATCGGCTGGGGCGAGGTG
CTCTACATATCGGAGACTTCGCGCGCGACACATCGGCTGGCCAAGCTCGACGTGCCGACGCCCGGCGACATGCGCGCGCC
CGGTGCGGCCAGCGGCATCTATGGCCTGGAATGCGCGATGGACGAGCTCGCCGTCGCGCTGAAGATGGATCCGCTGGAGC
TGCGGCTGCGCTGCTACTCCGATCGCGATCAGGACAAGAATCTGCCGTTCTCCAGCAAGCGGCTGAAGGAGTGCTATCAG
CAGGGCGCCGAAGCCTTCGGCTGGGCGAAGCGCAGCGCCGAGCCGCGCTCGATGCGCGACGGCCGCGAATTGGTTGGGTG
GGGCATGGCGAGCGGCGCGTGGGAGGCGATGCAGATGCCGTTCGCCTCGCGCATCGTGATGACCGCCAACGGTCATGTCG
AGGTGGCCAGCGCGACCTCCGATATCGGCACCGGCACCTACACCATCATGGCGCAGGTCGCCGCCGACATGCTCGGCGTG
CCGCTCGACAGCATCACGGTGAGGCTCGGTGATTCCACTCTGCCGAAGACGCCGGTCGAGGGCGGCTCCTGGACCGCCGC
GTCGATCTCGCACGCCATCGTCAATGCCGCCGACGACATCCGCGCGGAGCTGCTCGCGATCGCGCAGACCATGCCGGGCT
CGCCACTGCAGGGGCTGACCGCCGACGAGGTGACACTGGCCGACGGCGCCATCGTCGCCATCGCCGACCGCAGCCGGTCG
ATTCCGATGTCGGAGGTGATGCGCCACGGCGGCAAGGACCGCATCGAGAGGGAGCGTGGCGCTGACTTCGAGGAGGACGA
CAAGCACGCCCACAACACCCATTCCGCCGTCTTCGCCGAAGTGAAGATCGACGAGGAGCTCGGCGTCGTCAGGGTAACCC
GTATCGTCAACGCCGTCGCCGCCGGCCGCATCCTCAACACCAAGACCGCATCGAGCCAGATCATGGGCGGCATCGTCATG
GGCATCGGCATGGCCCTGCATGAGGAAGCCATGATCGACCATCGCTTCGGCCGCATCATGAATGCCAACATCGCCGAGTA
CCACATGCCGGTGAACGCCGACGTCCACGACATCCAGGTGATCTTCGTCGAGGAGGAGGACCGCATCATCAACAAGATGG
GCATCAAGGGCGTCGGCGAGATCGGCATCGTCGGCGTCCCTGCGGCGATTGCCAACGCGGTCTATCACGCCACCGGCAAG
CGCGTGCGGGACCTGCCGATCACGCTGGACAAGCTGCTGGGGTGA

Upstream 100 bases:

>100_bases
TTCAAGCTCCCGCTCGCCCGCCGCGCTATCGTCAGGACCCTGACGCAGGCGGCCAATGGCACGCCGCAGATCCAATCCAT
CAAGTCCATCCGGTGATCTC

Downstream 100 bases:

>100_bases
GCATCACTTGACCCGACGGCGCGAGCGGATCATGGTTGTCGGCCGAGTTCATTGTCCGACTTTGGACGCGCGTGCTGATT
GTCATGGTCTCCGATCTGGC

Product: putative xanthine dehydrogenase (YagR-like), molybdenum binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 734; Mature: 733

Protein sequence:

>734_residues
MTAHIGTATSRVDGRAKVTGSAKYAAEFSAPDLAFGVVVSSTIPKGRIVSIDASRARAVEGVIDVLTHSNRVRMADKDDG
YRDEVAPEDGSPYRPLYDDRVHFNLQPVALVIAEDEDTARFAATLVDIRYHTEDFATDLHAQREQAFKVDKPIKPRGDAT
KALASAPVRHDADYGVPMEYHNPMELYGSTVLWQDGGRLVVYDKTQGVQNVQRYVCSVFELKENDVQVMSPYVGGAFGSG
LRPQYQVALAAMAALKLKRAVRVVLSRAQMYALCYRPATIERLALGAASDGALKALTHEAISMTSQHEAFSRNDIGWGEV
LYISETSRATHRLAKLDVPTPGDMRAPGAASGIYGLECAMDELAVALKMDPLELRLRCYSDRDQDKNLPFSSKRLKECYQ
QGAEAFGWAKRSAEPRSMRDGRELVGWGMASGAWEAMQMPFASRIVMTANGHVEVASATSDIGTGTYTIMAQVAADMLGV
PLDSITVRLGDSTLPKTPVEGGSWTAASISHAIVNAADDIRAELLAIAQTMPGSPLQGLTADEVTLADGAIVAIADRSRS
IPMSEVMRHGGKDRIERERGADFEEDDKHAHNTHSAVFAEVKIDEELGVVRVTRIVNAVAAGRILNTKTASSQIMGGIVM
GIGMALHEEAMIDHRFGRIMNANIAEYHMPVNADVHDIQVIFVEEEDRIINKMGIKGVGEIGIVGVPAAIANAVYHATGK
RVRDLPITLDKLLG

Sequences:

>Translated_734_residues
MTAHIGTATSRVDGRAKVTGSAKYAAEFSAPDLAFGVVVSSTIPKGRIVSIDASRARAVEGVIDVLTHSNRVRMADKDDG
YRDEVAPEDGSPYRPLYDDRVHFNLQPVALVIAEDEDTARFAATLVDIRYHTEDFATDLHAQREQAFKVDKPIKPRGDAT
KALASAPVRHDADYGVPMEYHNPMELYGSTVLWQDGGRLVVYDKTQGVQNVQRYVCSVFELKENDVQVMSPYVGGAFGSG
LRPQYQVALAAMAALKLKRAVRVVLSRAQMYALCYRPATIERLALGAASDGALKALTHEAISMTSQHEAFSRNDIGWGEV
LYISETSRATHRLAKLDVPTPGDMRAPGAASGIYGLECAMDELAVALKMDPLELRLRCYSDRDQDKNLPFSSKRLKECYQ
QGAEAFGWAKRSAEPRSMRDGRELVGWGMASGAWEAMQMPFASRIVMTANGHVEVASATSDIGTGTYTIMAQVAADMLGV
PLDSITVRLGDSTLPKTPVEGGSWTAASISHAIVNAADDIRAELLAIAQTMPGSPLQGLTADEVTLADGAIVAIADRSRS
IPMSEVMRHGGKDRIERERGADFEEDDKHAHNTHSAVFAEVKIDEELGVVRVTRIVNAVAAGRILNTKTASSQIMGGIVM
GIGMALHEEAMIDHRFGRIMNANIAEYHMPVNADVHDIQVIFVEEEDRIINKMGIKGVGEIGIVGVPAAIANAVYHATGK
RVRDLPITLDKLLG
>Mature_733_residues
TAHIGTATSRVDGRAKVTGSAKYAAEFSAPDLAFGVVVSSTIPKGRIVSIDASRARAVEGVIDVLTHSNRVRMADKDDGY
RDEVAPEDGSPYRPLYDDRVHFNLQPVALVIAEDEDTARFAATLVDIRYHTEDFATDLHAQREQAFKVDKPIKPRGDATK
ALASAPVRHDADYGVPMEYHNPMELYGSTVLWQDGGRLVVYDKTQGVQNVQRYVCSVFELKENDVQVMSPYVGGAFGSGL
RPQYQVALAAMAALKLKRAVRVVLSRAQMYALCYRPATIERLALGAASDGALKALTHEAISMTSQHEAFSRNDIGWGEVL
YISETSRATHRLAKLDVPTPGDMRAPGAASGIYGLECAMDELAVALKMDPLELRLRCYSDRDQDKNLPFSSKRLKECYQQ
GAEAFGWAKRSAEPRSMRDGRELVGWGMASGAWEAMQMPFASRIVMTANGHVEVASATSDIGTGTYTIMAQVAADMLGVP
LDSITVRLGDSTLPKTPVEGGSWTAASISHAIVNAADDIRAELLAIAQTMPGSPLQGLTADEVTLADGAIVAIADRSRSI
PMSEVMRHGGKDRIERERGADFEEDDKHAHNTHSAVFAEVKIDEELGVVRVTRIVNAVAAGRILNTKTASSQIMGGIVMG
IGMALHEEAMIDHRFGRIMNANIAEYHMPVNADVHDIQVIFVEEEDRIINKMGIKGVGEIGIVGVPAAIANAVYHATGKR
VRDLPITLDKLLG

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=639, Percent_Identity=22.6917057902973, Blast_Score=81, Evalue=4e-15,
Organism=Escherichia coli, GI1786478, Length=737, Percent_Identity=38.2632293080054, Blast_Score=420, Evalue=1e-118,
Organism=Escherichia coli, GI1789230, Length=762, Percent_Identity=29.3963254593176, Blast_Score=240, Evalue=2e-64,
Organism=Escherichia coli, GI1789246, Length=807, Percent_Identity=24.1635687732342, Blast_Score=135, Evalue=7e-33,
Organism=Caenorhabditis elegans, GI17540638, Length=683, Percent_Identity=21.6691068814056, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24647199, Length=706, Percent_Identity=23.0878186968839, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24647193, Length=741, Percent_Identity=22.4021592442645, Blast_Score=104, Evalue=3e-22,
Organism=Drosophila melanogaster, GI17737937, Length=710, Percent_Identity=23.8028169014084, Blast_Score=99, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274 [H]

Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 79565; Mature: 79434

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAHIGTATSRVDGRAKVTGSAKYAAEFSAPDLAFGVVVSSTIPKGRIVSIDASRARAVE
CCCCCCCCHHCCCCCEEEECCCCEEEECCCCCEEEEEEEECCCCCCEEEEEECHHHHHHH
GVIDVLTHSNRVRMADKDDGYRDEVAPEDGSPYRPLYDDRVHFNLQPVALVIAEDEDTAR
HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEEEEECCCCHHH
FAATLVDIRYHTEDFATDLHAQREQAFKVDKPIKPRGDATKALASAPVRHDADYGVPMEY
HHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
HNPMELYGSTVLWQDGGRLVVYDKTQGVQNVQRYVCSVFELKENDVQVMSPYVGGAFGSG
CCCHHHCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
LRPQYQVALAAMAALKLKRAVRVVLSRAQMYALCYRPATIERLALGAASDGALKALTHEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHH
ISMTSQHEAFSRNDIGWGEVLYISETSRATHRLAKLDVPTPGDMRAPGAASGIYGLECAM
HHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHH
DELAVALKMDPLELRLRCYSDRDQDKNLPFSSKRLKECYQQGAEAFGWAKRSAEPRSMRD
HHHHHHHCCCHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHC
GRELVGWGMASGAWEAMQMPFASRIVMTANGHVEVASATSDIGTGTYTIMAQVAADMLGV
CHHHHHCCCCCCCHHHHHCCCHHEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHCC
PLDSITVRLGDSTLPKTPVEGGSWTAASISHAIVNAADDIRAELLAIAQTMPGSPLQGLT
CCCCEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ADEVTLADGAIVAIADRSRSIPMSEVMRHGGKDRIERERGADFEEDDKHAHNTHSAVFAE
CCCEEECCCCEEEEECCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEE
VKIDEELGVVRVTRIVNAVAAGRILNTKTASSQIMGGIVMGIGMALHEEAMIDHRFGRIM
EEECCCCCHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NANIAEYHMPVNADVHDIQVIFVEEEDRIINKMGIKGVGEIGIVGVPAAIANAVYHATGK
CCCHHHEECCCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHCCC
RVRDLPITLDKLLG
EEECCCCCHHHHCC
>Mature Secondary Structure 
TAHIGTATSRVDGRAKVTGSAKYAAEFSAPDLAFGVVVSSTIPKGRIVSIDASRARAVE
CCCCCCCHHCCCCCEEEECCCCEEEECCCCCEEEEEEEECCCCCCEEEEEECHHHHHHH
GVIDVLTHSNRVRMADKDDGYRDEVAPEDGSPYRPLYDDRVHFNLQPVALVIAEDEDTAR
HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEEEEECCCCHHH
FAATLVDIRYHTEDFATDLHAQREQAFKVDKPIKPRGDATKALASAPVRHDADYGVPMEY
HHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
HNPMELYGSTVLWQDGGRLVVYDKTQGVQNVQRYVCSVFELKENDVQVMSPYVGGAFGSG
CCCHHHCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
LRPQYQVALAAMAALKLKRAVRVVLSRAQMYALCYRPATIERLALGAASDGALKALTHEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHH
ISMTSQHEAFSRNDIGWGEVLYISETSRATHRLAKLDVPTPGDMRAPGAASGIYGLECAM
HHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHH
DELAVALKMDPLELRLRCYSDRDQDKNLPFSSKRLKECYQQGAEAFGWAKRSAEPRSMRD
HHHHHHHCCCHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHC
GRELVGWGMASGAWEAMQMPFASRIVMTANGHVEVASATSDIGTGTYTIMAQVAADMLGV
CHHHHHCCCCCCCHHHHHCCCHHEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHCC
PLDSITVRLGDSTLPKTPVEGGSWTAASISHAIVNAADDIRAELLAIAQTMPGSPLQGLT
CCCCEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ADEVTLADGAIVAIADRSRSIPMSEVMRHGGKDRIERERGADFEEDDKHAHNTHSAVFAE
CCCEEECCCCEEEEECCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEE
VKIDEELGVVRVTRIVNAVAAGRILNTKTASSQIMGGIVMGIGMALHEEAMIDHRFGRIM
EEECCCCCHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NANIAEYHMPVNADVHDIQVIFVEEEDRIINKMGIKGVGEIGIVGVPAAIANAVYHATGK
CCCHHHEECCCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHCCC
RVRDLPITLDKLLG
EEECCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]