Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146342526
Identifier: 146342526
GI number: 146342526
Start: 5889324
End: 5890202
Strand: Reverse
Name: 146342526
Synonym: BRADO5688
Alternate gene names: NA
Gene position: 5890202-5889324 (Counterclockwise)
Preceding gene: 146342527
Following gene: 146342525
Centisome position: 78.99
GC content: 65.19
Gene sequence:
>879_bases ATGGTCTCCGATCTGGCTGCGTTGGCAGCTGCGCTCAGCATCGCCGTTAGCAACATCATCGCGCCATCGGCGGTGCGCCT GCTCGGCCCGGTGGTTTTCAACGCGATCCGCTTGTCGGCTGCGCTTCTCGCGGTGCTCATCACGGTCACAATGCGGGGTC GATGGGCGCTGCCGTCGACGAACCACTGGCTGATGCTGGCGATCTCGAGCCTGCTCGGCATCGTCGTGGCAGATTCCTGC TTCTATGCGGCGCTGGCGCGCCTCGGGCCGCGCTTGACCGCTGTTGTCTATGCGAGCTGGGCGGGGTTCGCCGCCATGCT TGGCTATCTGCTGCTCGGCGAGAGGCTGTCTGCCATCAAGATCCTGGGCATCGGCTTCATCATGGCCGGCGTCTGCGTCG CCGTCATCTTCAGGCAACCCGGAGCGGTCGCTGCGGAGACGCACGGCTCGCTGCGGACGGGCCTTCTGTTCGGTCTCGCA GCCGCCTTGTTCGCGGCCGCAGCTGTCCTGATCGCGCGTCCCGTCATGGCGGCCGGACTGGATCCCGCATTGGCGACGTC CATCCGTGCCGGGATCGGATTGATCGCGTTGTTGATCTTGTCCGCCATGACCAGATTCCGAAGCTCCATCCCAGCTAACC GATCCGTCGTCATCCGGTCCGCGCTGAGCGGCGTGCTGGGGATGGGGGTGGGCATGACGCTCGTATTGTTTGCGTTGACG AGCCGCCCTGTCGGGATTGTGTCCAGCCTTTCATCGACGACGCCCGTCATGATCCTGCCGTTGCTGTGGTGGCACACAGG GCTCAGGCCTTCGGCGGCGGCCTGGCTCGGAGCGGTTCTTGCGGTCGCGGGCGTTGCCGCAATCACTAGCGGATTTTGA
Upstream 100 bases:
>100_bases ACAAGCTGCTGGGGTGAGCATCACTTGACCCGACGGCGCGAGCGGATCATGGTTGTCGGCCGAGTTCATTGTCCGACTTT GGACGCGCGTGCTGATTGTC
Downstream 100 bases:
>100_bases AACCCGCGCTCGTATCGCGACCAATCCTGCCCCAGTCTTACCTTGGTTTGCGGTGCGAGGTGACATCTCTCCACGCTTCC GCCCCATGCTCTCCGAATTG
Product: DMT family permease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MVSDLAALAAALSIAVSNIIAPSAVRLLGPVVFNAIRLSAALLAVLITVTMRGRWALPSTNHWLMLAISSLLGIVVADSC FYAALARLGPRLTAVVYASWAGFAAMLGYLLLGERLSAIKILGIGFIMAGVCVAVIFRQPGAVAAETHGSLRTGLLFGLA AALFAAAAVLIARPVMAAGLDPALATSIRAGIGLIALLILSAMTRFRSSIPANRSVVIRSALSGVLGMGVGMTLVLFALT SRPVGIVSSLSSTTPVMILPLLWWHTGLRPSAAAWLGAVLAVAGVAAITSGF
Sequences:
>Translated_292_residues MVSDLAALAAALSIAVSNIIAPSAVRLLGPVVFNAIRLSAALLAVLITVTMRGRWALPSTNHWLMLAISSLLGIVVADSC FYAALARLGPRLTAVVYASWAGFAAMLGYLLLGERLSAIKILGIGFIMAGVCVAVIFRQPGAVAAETHGSLRTGLLFGLA AALFAAAAVLIARPVMAAGLDPALATSIRAGIGLIALLILSAMTRFRSSIPANRSVVIRSALSGVLGMGVGMTLVLFALT SRPVGIVSSLSSTTPVMILPLLWWHTGLRPSAAAWLGAVLAVAGVAAITSGF >Mature_292_residues MVSDLAALAAALSIAVSNIIAPSAVRLLGPVVFNAIRLSAALLAVLITVTMRGRWALPSTNHWLMLAISSLLGIVVADSC FYAALARLGPRLTAVVYASWAGFAAMLGYLLLGERLSAIKILGIGFIMAGVCVAVIFRQPGAVAAETHGSLRTGLLFGLA AALFAAAAVLIARPVMAAGLDPALATSIRAGIGLIALLILSAMTRFRSSIPANRSVVIRSALSGVLGMGVGMTLVLFALT SRPVGIVSSLSSTTPVMILPLLWWHTGLRPSAAAWLGAVLAVAGVAAITSGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29819; Mature: 29819
Theoretical pI: Translated: 12.24; Mature: 12.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSDLAALAAALSIAVSNIIAPSAVRLLGPVVFNAIRLSAALLAVLITVTMRGRWALPST CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC NHWLMLAISSLLGIVVADSCFYAALARLGPRLTAVVYASWAGFAAMLGYLLLGERLSAIK CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILGIGFIMAGVCVAVIFRQPGAVAAETHGSLRTGLLFGLAAALFAAAAVLIARPVMAAGL HHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPALATSIRAGIGLIALLILSAMTRFRSSIPANRSVVIRSALSGVLGMGVGMTLVLFALT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SRPVGIVSSLSSTTPVMILPLLWWHTGLRPSAAAWLGAVLAVAGVAAITSGF CCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVSDLAALAAALSIAVSNIIAPSAVRLLGPVVFNAIRLSAALLAVLITVTMRGRWALPST CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC NHWLMLAISSLLGIVVADSCFYAALARLGPRLTAVVYASWAGFAAMLGYLLLGERLSAIK CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILGIGFIMAGVCVAVIFRQPGAVAAETHGSLRTGLLFGLAAALFAAAAVLIARPVMAAGL HHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPALATSIRAGIGLIALLILSAMTRFRSSIPANRSVVIRSALSGVLGMGVGMTLVLFALT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SRPVGIVSSLSSTTPVMILPLLWWHTGLRPSAAAWLGAVLAVAGVAAITSGF CCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA