| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is phnE [H]
Identifier: 146342211
GI number: 146342211
Start: 5569902
End: 5570750
Strand: Reverse
Name: phnE [H]
Synonym: BRADO5363
Alternate gene names: 146342211
Gene position: 5570750-5569902 (Counterclockwise)
Preceding gene: 146342212
Following gene: 146342210
Centisome position: 74.71
GC content: 67.37
Gene sequence:
>849_bases ATGAGCCTTCCGGACACGCCGGATCCGACGCAGCTGCGCGAGCGCTATCCGCACATCTTCAACCGGCCGATGTCGGCACG GCTCGCGACCCCCTTGGTGCTGCTGCTGGCGCTCGCCGTCTTCGTCTTCGGTCTCGTCGACCTGGATTTCTCGCCGTCGC GCATTCTGTCCGGCCTTGGCCAGCTCGGCTGGATCGCGCGTTTGATGCTGCCGCCCGACCCGGGCGGCTCGCTGCCGGTC TATCTCAAGGCGCTCGGCGAGACGCTGTCGATCGCGGTGCTCGGCACCACGCTCGCCGCATGCCTTGCGTTCCCGGTCAG CCTGCTCGCCGCCCGCAACGTCATTCCCTCGGCGATCTTCCGCTTCCCGGTGCGGCGGCTGTTCGACACGATCCGCGGCG TCGACACGCTGATCTGGGCGCTGGTCTGGATCAATGTCGTCGGGCTCGGCCCCTTCGCTGGCGTGCTCGCGATCGCGGTC TCGGACTTCGGCGCGCTCGGCAAGCTGTTCTCGGAGGCGATGGAGAGCGCCGACCGCAAGCAGGTCGAAGGCGTGCGCGC CGCCGGCGGCAACGCGCTGCATGAGATCCGATTCGGCCTGCTGCCGCAGGTGCTTCCGGTCATCGCGGGGCAGGTGCTGT ACTTCATCGAGTCCAACACCCGTTCGGCGACCATCATCGGCATCGTTGGTGCCGGCGGCATCGGCCTGCAGCTCGCCGAA CAGATTCGCGTGCTGGAATGGCAGAAGGTGTCGTTCCTGATCCTGATGATTCTGGTGGCGGTGGCCGCGATCGACTGGAT CTCGAACAGGCTGCGCTTCGCCATCATCGGACGTCGCGCCGTCGCCTGA
Upstream 100 bases:
>100_bases ACGTCAGCGCCATCCTCGTGATGATCGTGGTGACGGTGTTCCTGATCGATATCGGCACCGGCTGGCTGCGCGGGCGGCTG TTCGGCGCGGAGGCGCGGAC
Downstream 100 bases:
>100_bases TCGCGGCGGCATCTGAAGGTTGCGATTGTTCGTAGGCGAACGATCCAGCTGTGCTCGCGCGTGTGTGCACTTCACGCGCT GTCGCAAATCTTTCATCTGC
Product: putative PhnE protein, phosphonate ABC transporter membrane protein
Products: 3-phospho-serine [Cytoplasm]; phosphite [Cytoplasm]; ADP; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSLPDTPDPTQLRERYPHIFNRPMSARLATPLVLLLALAVFVFGLVDLDFSPSRILSGLGQLGWIARLMLPPDPGGSLPV YLKALGETLSIAVLGTTLAACLAFPVSLLAARNVIPSAIFRFPVRRLFDTIRGVDTLIWALVWINVVGLGPFAGVLAIAV SDFGALGKLFSEAMESADRKQVEGVRAAGGNALHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE QIRVLEWQKVSFLILMILVAVAAIDWISNRLRFAIIGRRAVA
Sequences:
>Translated_282_residues MSLPDTPDPTQLRERYPHIFNRPMSARLATPLVLLLALAVFVFGLVDLDFSPSRILSGLGQLGWIARLMLPPDPGGSLPV YLKALGETLSIAVLGTTLAACLAFPVSLLAARNVIPSAIFRFPVRRLFDTIRGVDTLIWALVWINVVGLGPFAGVLAIAV SDFGALGKLFSEAMESADRKQVEGVRAAGGNALHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE QIRVLEWQKVSFLILMILVAVAAIDWISNRLRFAIIGRRAVA >Mature_281_residues SLPDTPDPTQLRERYPHIFNRPMSARLATPLVLLLALAVFVFGLVDLDFSPSRILSGLGQLGWIARLMLPPDPGGSLPVY LKALGETLSIAVLGTTLAACLAFPVSLLAARNVIPSAIFRFPVRRLFDTIRGVDTLIWALVWINVVGLGPFAGVLAIAVS DFGALGKLFSEAMESADRKQVEGVRAAGGNALHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAEQ IRVLEWQKVSFLILMILVAVAAIDWISNRLRFAIIGRRAVA
Specific function: Part of the binding-protein-dependent transport system for phosphonates; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG3639
COG function: function code P; ABC-type phosphate/phosphonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005769 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30325; Mature: 30194
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPDTPDPTQLRERYPHIFNRPMSARLATPLVLLLALAVFVFGLVDLDFSPSRILSGLG CCCCCCCCHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QLGWIARLMLPPDPGGSLPVYLKALGETLSIAVLGTTLAACLAFPVSLLAARNVIPSAIF HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFPVRRLFDTIRGVDTLIWALVWINVVGLGPFAGVLAIAVSDFGALGKLFSEAMESADRK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVEGVRAAGGNALHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCCHHHHHHH QIRVLEWQKVSFLILMILVAVAAIDWISNRLRFAIIGRRAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHCC >Mature Secondary Structure SLPDTPDPTQLRERYPHIFNRPMSARLATPLVLLLALAVFVFGLVDLDFSPSRILSGLG CCCCCCCHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QLGWIARLMLPPDPGGSLPVYLKALGETLSIAVLGTTLAACLAFPVSLLAARNVIPSAIF HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFPVRRLFDTIRGVDTLIWALVWINVVGLGPFAGVLAIAVSDFGALGKLFSEAMESADRK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVEGVRAAGGNALHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCCHHHHHHH QIRVLEWQKVSFLILMILVAVAAIDWISNRLRFAIIGRRAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]