| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342189
Identifier: 146342189
GI number: 146342189
Start: 5552703
End: 5553329
Strand: Direct
Name: 146342189
Synonym: BRADO5340
Alternate gene names: NA
Gene position: 5552703-5553329 (Clockwise)
Preceding gene: 146342185
Following gene: 146342190
Centisome position: 74.47
GC content: 65.39
Gene sequence:
>627_bases ATGTTGGACGTCGCCATGATCGAGCGTGCACTCGAGAAGCCGGGAAAGACCAAGGGAGGGCTTGCCCGCGCCATGGGCGT GCGGCCGGGCGCCGTCTCCGAGATCCTCGGGGGCCAGCGCCTGATCAAGGCCGCCGAAATCCCGCTGATCACCGAATATC TGGAGCTCAACTCCGTCCCGATCATGGGCCGGGTCGGCGCCGGCTCGGTGATCGAGCCGGATTACGAGCAGGTTCCGCTG GAGGGCATCGGCGAGGTCGCCCTGCCCTTCCCGATCTTCGAGGAGACCATCGCCTTCGAGGTCACCGGCGATTCGATGCT GCCGAAATATGAGAATGGCGACGTGATCGTCGTGTACAAGGAGCAGCGCCACCCGCTGTCCAGCTACTACGGCGAGGAGG CCGTGGTGCGGTTGAAGTCCGGCGAGCGTTACCTGAAGACCATCGAGCGCGGCAAGTCGCCGTCCGTGGTCAATCTGAAG AGCTTCAACGCCAAACCGATCGTCGGCGTCAAGCTGGACTGGATCGGCGAGATCTTCGTCACCTTGCCGCGCGGCCAGAT CTCGCGGATCCGCGCCAAGGCGGCGGCGAAGTCGCGCGCCCGGGCGGCGAGCAAGTCGGAGCGCTAA
Upstream 100 bases:
>100_bases GACGGCTCAATTTCCGTTATTCCGAAGAAAAAGTCAAGCTTGAGTTCTGATAAATCGAAACATATACTCGTTTCCGAGAT TCGCAAAAGGGGTCAAAGCC
Downstream 100 bases:
>100_bases GGCACGATCGGAGGGATGCCGGGCGCTCTCGCCTGCGTCCTGTCCGAATCAGCTTGACAAATTTCTGATTTACAGAAATA ATGGCGCGATCACCGTCAGC
Product: putative LexA repressor
Products: NA
Alternate protein names: LexA Repressor
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MLDVAMIERALEKPGKTKGGLARAMGVRPGAVSEILGGQRLIKAAEIPLITEYLELNSVPIMGRVGAGSVIEPDYEQVPL EGIGEVALPFPIFEETIAFEVTGDSMLPKYENGDVIVVYKEQRHPLSSYYGEEAVVRLKSGERYLKTIERGKSPSVVNLK SFNAKPIVGVKLDWIGEIFVTLPRGQISRIRAKAAAKSRARAASKSER
Sequences:
>Translated_208_residues MLDVAMIERALEKPGKTKGGLARAMGVRPGAVSEILGGQRLIKAAEIPLITEYLELNSVPIMGRVGAGSVIEPDYEQVPL EGIGEVALPFPIFEETIAFEVTGDSMLPKYENGDVIVVYKEQRHPLSSYYGEEAVVRLKSGERYLKTIERGKSPSVVNLK SFNAKPIVGVKLDWIGEIFVTLPRGQISRIRAKAAAKSRARAASKSER >Mature_208_residues MLDVAMIERALEKPGKTKGGLARAMGVRPGAVSEILGGQRLIKAAEIPLITEYLELNSVPIMGRVGAGSVIEPDYEQVPL EGIGEVALPFPIFEETIAFEVTGDSMLPKYENGDVIVVYKEQRHPLSSYYGEEAVVRLKSGERYLKTIERGKSPSVVNLK SFNAKPIVGVKLDWIGEIFVTLPRGQISRIRAKAAAKSRARAASKSER
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22708; Mature: 22708
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDVAMIERALEKPGKTKGGLARAMGVRPGAVSEILGGQRLIKAAEIPLITEYLELNSVP CCCHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHCCHHHHHHHCCCHHHHHHHHCCCC IMGRVGAGSVIEPDYEQVPLEGIGEVALPFPIFEETIAFEVTGDSMLPKYENGDVIVVYK EEEECCCCCCCCCCHHHCCCCCCCCCCCCCCHHCCEEEEEEECCCCCCCCCCCCEEEEEC EQRHPLSSYYGEEAVVRLKSGERYLKTIERGKSPSVVNLKSFNAKPIVGVKLDWIGEIFV CCCCCHHHHCCCEEEEEECCCHHHHHHHHCCCCCCEEEEECCCCCCEEEEEHHHHCEEEE TLPRGQISRIRAKAAAKSRARAASKSER ECCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLDVAMIERALEKPGKTKGGLARAMGVRPGAVSEILGGQRLIKAAEIPLITEYLELNSVP CCCHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHCCHHHHHHHCCCHHHHHHHHCCCC IMGRVGAGSVIEPDYEQVPLEGIGEVALPFPIFEETIAFEVTGDSMLPKYENGDVIVVYK EEEECCCCCCCCCCHHHCCCCCCCCCCCCCCHHCCEEEEEEECCCCCCCCCCCCEEEEEC EQRHPLSSYYGEEAVVRLKSGERYLKTIERGKSPSVVNLKSFNAKPIVGVKLDWIGEIFV CCCCCHHHHCCCEEEEEECCCHHHHHHHHCCCCCCEEEEECCCCCCEEEEEHHHHCEEEE TLPRGQISRIRAKAAAKSRARAASKSER ECCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA