| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is maeA [H]
Identifier: 146342172
GI number: 146342172
Start: 5538080
End: 5539711
Strand: Direct
Name: maeA [H]
Synonym: BRADO5322
Alternate gene names: 146342172
Gene position: 5538080-5539711 (Clockwise)
Preceding gene: 146342171
Following gene: 146342174
Centisome position: 74.27
GC content: 66.54
Gene sequence:
>1632_bases ATGAGCGCACCGACGCACTCAACCCATTCCCCGCGCGGCCTGACGCTGCTGCGCGACCCGCTGCTCAACAAGGGCACCGG CTTCACCGAGCAGGAGCGCGACGCGCTCGGCCTGCGCGGCTTCCTGCCCGCAGGCGTCATGTCGATGCAGGCCCAGGCCG AGCGTATCCTGGTCAATCTGCGCAGCCTGTCGAACGACCTGGAGAAGTACGTCGCGCTGAACGCGCTGCACGACCGCAAC GAGGCGCTGTTCTTCCGGGTGGTCTGCGACAACATCGACGAGATCCAGCCGCTGATCTACACGCCGACCGTCGGCCTCGC CTGTCAGAAATACGGCCTGATCTTCCAGCGTCCGCGCGGCCTGTTCATCTCGGCCAATGATCGCGGGCGGATCGCGGAGA TCCTCGCCAATTGGCCGTATCGCGCCAGGCTGATCGTCGTCACCGACGGCGAGCGTATTCTCGGCCTCGGCGATCTCGGC GCCAACGGCATGGGCATCCCGGTCGGCAAGCTGTCGCTGTACTCGGCCTGCGCCGGCATTCACCCTGAGGAATGCCTTCC GGTCATGCTCGACGTCGGCACCAACAATGAGGAGCTGCTCGCCGATCCCTACTACATCGGACTGCGCCAGAAGCGCCTGA CCGGCGAAGCCTACGACGCCTTCGTCGACGAATTCATGACCGCCGCCCGAACGGCCTTCCCCGGCGTGCTGATCCAGTTC GAGGATTTCGCCAACCACGCCGCGTTCAAGCTGCTGCACAAATATCGCGACGAGGCCTGCGTCTTCAACGACGACATCCA GGGCACCGCGGCAGTCGCGCTCGCCGGGCTTTTCTCCGCTCTGCGCATCACCGGCGGCAAGCTGCGCGATCAGACCGTGC TGTTTCTCGGCGCCGGCGAGGCGGCGACCGGCATTGCCGATCTCGTCGTCTCGGCGATGATGGCCGAGGGGCTGTCCGAG GCCGAGGCGCTGCGGCGCAACTGGCTGACGGATTCGCGCGGCCTCGTCATCAAGGGGCGCGAGAATCTGCACGGCCACAA GCTGCGTTATGCGCACGACCAGGCGCCGATCGGCGATTTCCTGTCCGCGATCAAGACGCTCAAGCCGACGGCGATTATCG GCGTGGCCGCGGTCGGCGGCGCCTTCACGCCGGAGGTGCTGCAGGCGATGGCGGAGCTCAACGAGCGCCCGATCATCTTT GCGCTGTCGAACCCGACCTCGAAGGCGGAATGCTCGGCGGAGGCCGCCTATCGCTACACGCAGGGACGCGCGCTGTTCGC CTGCGGCAGTCCGTATGATTCGGTCAAGCTCGACGGCAAGACCTTCGTGCCGCGCCAGGGCAACAACTCCTACATCTTTC CCGGCGTCGGCCTCGGCGCCATCGCCAGCGGCGCGCGGCTGGTGACTGACGAGATGTTCATGGCGGCGGCTCATACGCTT GCGAACTGCGTCACGGGTGCCGATCTCGAACAGGGCAGCCTGTATCCGGCCCTGCCGCGCATCCGCGAGGTGTCCGCCCA TATCGGTGCGGCCGTCGCCGGCGTCGCCTATCAGAACGGGCTCGCCACCGGCCCTGCACCGAACGATCTGCTCGGCTTCG TCGAGTCGAAGATGTACGACGCGCGCTACTGA
Upstream 100 bases:
>100_bases GCCATCCCGCCGCTGTTGATGCCGATCAACGCCGGCGCGCTCCGGAATGGCGAGGCTCGAACAAAGGACCTCGGAGACTG CCTTGACCCAACCGCAACGT
Downstream 100 bases:
>100_bases TCGCGCTCGCGCGGATGCCTTGCAAAAGAGGCATCCGCGTCTCCACGACCCGCCGAAGGCACCCGGCTATTGATCCGGCA CGATCGCATTGGTCGGGGTG
Product: malate dehydrogenase
Products: NA
Alternate protein names: NAD-ME [H]
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MSAPTHSTHSPRGLTLLRDPLLNKGTGFTEQERDALGLRGFLPAGVMSMQAQAERILVNLRSLSNDLEKYVALNALHDRN EALFFRVVCDNIDEIQPLIYTPTVGLACQKYGLIFQRPRGLFISANDRGRIAEILANWPYRARLIVVTDGERILGLGDLG ANGMGIPVGKLSLYSACAGIHPEECLPVMLDVGTNNEELLADPYYIGLRQKRLTGEAYDAFVDEFMTAARTAFPGVLIQF EDFANHAAFKLLHKYRDEACVFNDDIQGTAAVALAGLFSALRITGGKLRDQTVLFLGAGEAATGIADLVVSAMMAEGLSE AEALRRNWLTDSRGLVIKGRENLHGHKLRYAHDQAPIGDFLSAIKTLKPTAIIGVAAVGGAFTPEVLQAMAELNERPIIF ALSNPTSKAECSAEAAYRYTQGRALFACGSPYDSVKLDGKTFVPRQGNNSYIFPGVGLGAIASGARLVTDEMFMAAAHTL ANCVTGADLEQGSLYPALPRIREVSAHIGAAVAGVAYQNGLATGPAPNDLLGFVESKMYDARY
Sequences:
>Translated_543_residues MSAPTHSTHSPRGLTLLRDPLLNKGTGFTEQERDALGLRGFLPAGVMSMQAQAERILVNLRSLSNDLEKYVALNALHDRN EALFFRVVCDNIDEIQPLIYTPTVGLACQKYGLIFQRPRGLFISANDRGRIAEILANWPYRARLIVVTDGERILGLGDLG ANGMGIPVGKLSLYSACAGIHPEECLPVMLDVGTNNEELLADPYYIGLRQKRLTGEAYDAFVDEFMTAARTAFPGVLIQF EDFANHAAFKLLHKYRDEACVFNDDIQGTAAVALAGLFSALRITGGKLRDQTVLFLGAGEAATGIADLVVSAMMAEGLSE AEALRRNWLTDSRGLVIKGRENLHGHKLRYAHDQAPIGDFLSAIKTLKPTAIIGVAAVGGAFTPEVLQAMAELNERPIIF ALSNPTSKAECSAEAAYRYTQGRALFACGSPYDSVKLDGKTFVPRQGNNSYIFPGVGLGAIASGARLVTDEMFMAAAHTL ANCVTGADLEQGSLYPALPRIREVSAHIGAAVAGVAYQNGLATGPAPNDLLGFVESKMYDARY >Mature_542_residues SAPTHSTHSPRGLTLLRDPLLNKGTGFTEQERDALGLRGFLPAGVMSMQAQAERILVNLRSLSNDLEKYVALNALHDRNE ALFFRVVCDNIDEIQPLIYTPTVGLACQKYGLIFQRPRGLFISANDRGRIAEILANWPYRARLIVVTDGERILGLGDLGA NGMGIPVGKLSLYSACAGIHPEECLPVMLDVGTNNEELLADPYYIGLRQKRLTGEAYDAFVDEFMTAARTAFPGVLIQFE DFANHAAFKLLHKYRDEACVFNDDIQGTAAVALAGLFSALRITGGKLRDQTVLFLGAGEAATGIADLVVSAMMAEGLSEA EALRRNWLTDSRGLVIKGRENLHGHKLRYAHDQAPIGDFLSAIKTLKPTAIIGVAAVGGAFTPEVLQAMAELNERPIIFA LSNPTSKAECSAEAAYRYTQGRALFACGSPYDSVKLDGKTFVPRQGNNSYIFPGVGLGAIASGARLVTDEMFMAAAHTLA NCVTGADLEQGSLYPALPRIREVSAHIGAAVAGVAYQNGLATGPAPNDLLGFVESKMYDARY
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=546, Percent_Identity=54.9450549450549, Blast_Score=621, Evalue=1e-178, Organism=Homo sapiens, GI62420882, Length=557, Percent_Identity=53.3213644524237, Blast_Score=599, Evalue=1e-171, Organism=Homo sapiens, GI62420880, Length=557, Percent_Identity=53.3213644524237, Blast_Score=599, Evalue=1e-171, Organism=Homo sapiens, GI239049447, Length=557, Percent_Identity=53.3213644524237, Blast_Score=599, Evalue=1e-171, Organism=Homo sapiens, GI4505145, Length=540, Percent_Identity=51.6666666666667, Blast_Score=541, Evalue=1e-154, Organism=Homo sapiens, GI270265879, Length=457, Percent_Identity=54.4857768052516, Blast_Score=485, Evalue=1e-137, Organism=Escherichia coli, GI87081919, Length=541, Percent_Identity=43.8077634011091, Blast_Score=447, Evalue=1e-127, Organism=Escherichia coli, GI1788806, Length=416, Percent_Identity=28.6057692307692, Blast_Score=87, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17537199, Length=547, Percent_Identity=51.3711151736746, Blast_Score=551, Evalue=1e-157, Organism=Saccharomyces cerevisiae, GI6322823, Length=557, Percent_Identity=38.0610412926391, Blast_Score=347, Evalue=2e-96, Organism=Drosophila melanogaster, GI281362672, Length=537, Percent_Identity=54.1899441340782, Blast_Score=603, Evalue=1e-172, Organism=Drosophila melanogaster, GI281362674, Length=537, Percent_Identity=54.1899441340782, Blast_Score=602, Evalue=1e-172, Organism=Drosophila melanogaster, GI21356279, Length=537, Percent_Identity=54.1899441340782, Blast_Score=602, Evalue=1e-172, Organism=Drosophila melanogaster, GI24646388, Length=536, Percent_Identity=54.4776119402985, Blast_Score=578, Evalue=1e-165, Organism=Drosophila melanogaster, GI24646386, Length=536, Percent_Identity=54.4776119402985, Blast_Score=578, Evalue=1e-165, Organism=Drosophila melanogaster, GI78707242, Length=525, Percent_Identity=43.047619047619, Blast_Score=437, Evalue=1e-122, Organism=Drosophila melanogaster, GI78707238, Length=525, Percent_Identity=43.047619047619, Blast_Score=437, Evalue=1e-122, Organism=Drosophila melanogaster, GI78707240, Length=501, Percent_Identity=43.9121756487026, Blast_Score=430, Evalue=1e-120, Organism=Drosophila melanogaster, GI281363505, Length=524, Percent_Identity=41.6030534351145, Blast_Score=430, Evalue=1e-120, Organism=Drosophila melanogaster, GI78707236, Length=524, Percent_Identity=41.6030534351145, Blast_Score=430, Evalue=1e-120, Organism=Drosophila melanogaster, GI281363503, Length=522, Percent_Identity=41.3793103448276, Blast_Score=425, Evalue=1e-119, Organism=Drosophila melanogaster, GI78707232, Length=500, Percent_Identity=42.2, Blast_Score=419, Evalue=1e-117, Organism=Drosophila melanogaster, GI19922384, Length=534, Percent_Identity=36.7041198501873, Blast_Score=359, Evalue=2e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 58455; Mature: 58323
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPTHSTHSPRGLTLLRDPLLNKGTGFTEQERDALGLRGFLPAGVMSMQAQAERILVNL CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH RSLSNDLEKYVALNALHDRNEALFFRVVCDNIDEIQPLIYTPTVGLACQKYGLIFQRPRG HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCCEEECCCCCHHHHHCCCEEECCCC LFISANDRGRIAEILANWPYRARLIVVTDGERILGLGDLGANGMGIPVGKLSLYSACAGI EEEECCCCCHHHHHHHCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHCCC HPEECLPVMLDVGTNNEELLADPYYIGLRQKRLTGEAYDAFVDEFMTAARTAFPGVLIQF CHHHCCEEEEECCCCCCCEEECCEEECCCHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEE EDFANHAAFKLLHKYRDEACVFNDDIQGTAAVALAGLFSALRITGGKLRDQTVLFLGAGE HHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC AATGIADLVVSAMMAEGLSEAEALRRNWLTDSRGLVIKGRENLHGHKLRYAHDQAPIGDF HHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCCCCCHHHH LSAIKTLKPTAIIGVAAVGGAFTPEVLQAMAELNERPIIFALSNPTSKAECSAEAAYRYT HHHHHHCCCHHEEEEHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHCHHHHHEEE QGRALFACGSPYDSVKLDGKTFVPRQGNNSYIFPGVGLGAIASGARLVTDEMFMAAAHTL CCCEEEEECCCCCCEEECCCEECCCCCCCCEEECCCCHHHHHCCCCHHHHHHHHHHHHHH ANCVTGADLEQGSLYPALPRIREVSAHIGAAVAGVAYQNGLATGPAPNDLLGFVESKMYD HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC ARY CCC >Mature Secondary Structure SAPTHSTHSPRGLTLLRDPLLNKGTGFTEQERDALGLRGFLPAGVMSMQAQAERILVNL CCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH RSLSNDLEKYVALNALHDRNEALFFRVVCDNIDEIQPLIYTPTVGLACQKYGLIFQRPRG HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCCEEECCCCCHHHHHCCCEEECCCC LFISANDRGRIAEILANWPYRARLIVVTDGERILGLGDLGANGMGIPVGKLSLYSACAGI EEEECCCCCHHHHHHHCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHCCC HPEECLPVMLDVGTNNEELLADPYYIGLRQKRLTGEAYDAFVDEFMTAARTAFPGVLIQF CHHHCCEEEEECCCCCCCEEECCEEECCCHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEE EDFANHAAFKLLHKYRDEACVFNDDIQGTAAVALAGLFSALRITGGKLRDQTVLFLGAGE HHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC AATGIADLVVSAMMAEGLSEAEALRRNWLTDSRGLVIKGRENLHGHKLRYAHDQAPIGDF HHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCCCCCHHHH LSAIKTLKPTAIIGVAAVGGAFTPEVLQAMAELNERPIIFALSNPTSKAECSAEAAYRYT HHHHHHCCCHHEEEEHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHCHHHHHEEE QGRALFACGSPYDSVKLDGKTFVPRQGNNSYIFPGVGLGAIASGARLVTDEMFMAAAHTL CCCEEEEECCCCCCEEECCCEECCCCCCCCEEECCCCHHHHHCCCCHHHHHHHHHHHHHH ANCVTGADLEQGSLYPALPRIREVSAHIGAAVAGVAYQNGLATGPAPNDLLGFVESKMYD HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC ARY CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA