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The map label for this gene is yrbE [C]

Identifier: 146342154

GI number: 146342154

Start: 5517005

End: 5518141

Strand: Reverse

Name: yrbE [C]

Synonym: BRADO5304

Alternate gene names: 146342154

Gene position: 5518141-5517005 (Counterclockwise)

Preceding gene: 146342157

Following gene: 146342153

Centisome position: 74.0

GC content: 61.04

Gene sequence:

>1137_bases
TTGGATTCTCGTCCAGGATTGATCGCCGAGGCGACGGAAGAGGTACTCGAGCTCCGTGCCAGTGGGTCCTGGGTGTCTCG
CAATGTGACCCAGCTTGAAAGCCTGACCGGTTCTGCTTGCGCGAAGCTCGGCCATGCCGGCATCGTGAGGCTCGACCTCG
GATCAGTCAGCGAGATCGATACCGTCGGCGCCTGGCTGATTGAGAAGCTCAGTCGCAGAGCGGGCGTTGGTGGCCGCCGG
GTCGAGATGACGGGTGTCGCCGCGAGCTATAGCGGCCTCGTAGACGAAGTTCGACAGGTCAATCGGCGAGAGATCGCGCC
GGCGCCCCGGCCCAATCCGATCGTGGCAAGGCTTACCGATCTCGGCCGCTCGACGATGGGAGCGGCGAAGGACGTCACCA
TTTTCCTGGACATGCTGGCGGCGTTGTCGTTTGCGTTGGTGCGAACGTTGCGCCGCCCACGGTCGCTGCGCGTCACGTCG
CTCGTCTATCAGATGTACCGGATCGGATGGCAGGCCATTCCGATCGTGGTGCTGATCACATTCCTGATCGGCGCGATCAT
TGCTCAGCAGGGCATCTTCCACTTCAGACGGTTCGGTGCCGAATCCTACGTGGTCGACATGGTCGGAATTCTGGTTCTTC
GTGAGCTTGGCGTCCTGATCGTTGCGATCATGGTGGCTGGCCGGTCGGGAAGCGCATACACCGCCGAAATCGGATCGATG
AAGATGCGCGAGGAGATCGATGCACTGGTGACGATGGGGCTCGATCCGGTAGAGGTGCTGATCCTGCCGCGTATCGTGGC
GCTGATTCTGACCTTGCCCATTCTCGCCTTCATCGGGTCGATGGCAGCGCTCTATGGCGGAGGACTGGTTGCTCAGCTCT
ATGGCGGCATGGGACCGCCGATCTTCATCGCGCGCTTACATGAGGCAATTTCGGTCACGCATTTTGAAGTGGGCATGTTG
AAGGCGCCCTTCATGGCGCTGGTGATCGGCATCGTTGCCTGCAGCGAGGGCTTGCGGGTCAAGGGCAGCGCCGAGTCGCT
GGGACAGCAGACCACGACGTCGGTCGTGAAGTCCATCTTCCTGGTGATCGTGCTCGACGGCCTCTTCGCCATCTTCTTTG
CGTCCATTGGAATGTAG

Upstream 100 bases:

>100_bases
GGTCGCGAGCTGCGTGCTTGATGCATATCAAGCCGGGTAGATCGATGGGATCTAGGAACGGGTGATGCCCCCGGGCAGCG
CGGAGCAAGGAGACATTCAG

Downstream 100 bases:

>100_bases
CAATGGATGATCGCGGCGTCTCGAGCGCAATCCGCGTTACTGATCTTGTCGTCGGATTTGGCCGGCAGATCGTTCTCAAT
CAATTATCCCTCGAGGTCCG

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MDSRPGLIAEATEEVLELRASGSWVSRNVTQLESLTGSACAKLGHAGIVRLDLGSVSEIDTVGAWLIEKLSRRAGVGGRR
VEMTGVAASYSGLVDEVRQVNRREIAPAPRPNPIVARLTDLGRSTMGAAKDVTIFLDMLAALSFALVRTLRRPRSLRVTS
LVYQMYRIGWQAIPIVVLITFLIGAIIAQQGIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAEIGSM
KMREEIDALVTMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPPIFIARLHEAISVTHFEVGML
KAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIFLVIVLDGLFAIFFASIGM

Sequences:

>Translated_378_residues
MDSRPGLIAEATEEVLELRASGSWVSRNVTQLESLTGSACAKLGHAGIVRLDLGSVSEIDTVGAWLIEKLSRRAGVGGRR
VEMTGVAASYSGLVDEVRQVNRREIAPAPRPNPIVARLTDLGRSTMGAAKDVTIFLDMLAALSFALVRTLRRPRSLRVTS
LVYQMYRIGWQAIPIVVLITFLIGAIIAQQGIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAEIGSM
KMREEIDALVTMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPPIFIARLHEAISVTHFEVGML
KAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIFLVIVLDGLFAIFFASIGM
>Mature_378_residues
MDSRPGLIAEATEEVLELRASGSWVSRNVTQLESLTGSACAKLGHAGIVRLDLGSVSEIDTVGAWLIEKLSRRAGVGGRR
VEMTGVAASYSGLVDEVRQVNRREIAPAPRPNPIVARLTDLGRSTMGAAKDVTIFLDMLAALSFALVRTLRRPRSLRVTS
LVYQMYRIGWQAIPIVVLITFLIGAIIAQQGIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAEIGSM
KMREEIDALVTMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPPIFIARLHEAISVTHFEVGML
KAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIFLVIVLDGLFAIFFASIGM

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=207, Percent_Identity=30.9178743961353, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 40467; Mature: 40467

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSRPGLIAEATEEVLELRASGSWVSRNVTQLESLTGSACAKLGHAGIVRLDLGSVSEID
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHH
TVGAWLIEKLSRRAGVGGRRVEMTGVAASYSGLVDEVRQVNRREIAPAPRPNPIVARLTD
HHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LGRSTMGAAKDVTIFLDMLAALSFALVRTLRRPRSLRVTSLVYQMYRIGWQAIPIVVLIT
HCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
FLIGAIIAQQGIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAEIGSM
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHH
KMREEIDALVTMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCH
IFIARLHEAISVTHFEVGMLKAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHH
LVIVLDGLFAIFFASIGM
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDSRPGLIAEATEEVLELRASGSWVSRNVTQLESLTGSACAKLGHAGIVRLDLGSVSEID
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHH
TVGAWLIEKLSRRAGVGGRRVEMTGVAASYSGLVDEVRQVNRREIAPAPRPNPIVARLTD
HHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LGRSTMGAAKDVTIFLDMLAALSFALVRTLRRPRSLRVTSLVYQMYRIGWQAIPIVVLIT
HCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
FLIGAIIAQQGIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAEIGSM
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHH
KMREEIDALVTMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCH
IFIARLHEAISVTHFEVGMLKAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHH
LVIVLDGLFAIFFASIGM
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA