| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is sgaA [H]
Identifier: 146342131
GI number: 146342131
Start: 5489379
End: 5490584
Strand: Reverse
Name: sgaA [H]
Synonym: BRADO5278
Alternate gene names: 146342131
Gene position: 5490584-5489379 (Counterclockwise)
Preceding gene: 146342138
Following gene: 146342130
Centisome position: 73.63
GC content: 66.67
Gene sequence:
>1206_bases GTGACCCGCCATCAAGGTCGTCATTTCCTGCACATTCCGGGGCCCAGCCCAGTCCCCGAGCGCGTGCTGCGGGCGATGGA CATGCCGGTGATCGACCACCGCAGCGCCGAGTTCGCCGAGCTCGGCAAGGCCGTGCTCTCTGGTTCGCAGAAGATCTTCA AGACCACGGGCCCGGTCATCATCTATCCGTCATCTGGCACGGGCGCCTGGGAGGCTGCGATCGTGAACACGTTGTCGCCA GGCGACAGGGTGCTGATGGTCGAGACCGGCCACTTCGCGACGCTGTGGCGCCAGATGGCGGCGCGTTGGGGCATCGAGGT CGATTTCATTCCCGGCGACTGGCGCCGCGGCGTCGATCCCGCTGCCATCGAGGAGAAGCTGACGGCCGATACCGCGCACC AGTTCAAGGCGGTGATGGTCGTGCACAACGAGACCTCGACCGGCGCGACCAGCCGGATCGGCGAGGTGCGCGCCGCGATG GACCGCGCGGGGCATCCGGCGCTGCTGATGGTCGATACCATCTCCGGCCTCGCCTCGGCCGACTTCCGCTTCGACGAGTG GAAGGTCGACGTGGCCGTGTCGTGCTCGCAGAAGGGCTTCATGTTGCCGCCGGGCCTCGGCTTCAACGCCGTCTCGGACA AGGCGCGCGCCGTCGCCAAGGCGAACAAGATGCCGCGTTCATTCTGGGATTGGGAGGATATGCTGAAGCTGAACGCGAAC GGCTTCTTCCCCTATACGCCGGCGACGAACCTGCTTTACGGCCTGCGCGAGGCGATTGCGATGTTGCTCGAGGAAGGGCT CGAACAGGTGTTCGCGCGACACCAGAAGCTCGCGGCGGCGACCCGCGCGGCGGTCGAGCATTGGGGGCTCGACGTGCTGT GCCAGGAGCCGCGGGATTATTCGCCGGTGCTGACCGCCGTGCTGATGCCGCCCGGGCATGACGCCGATCAGTTCCGCCAG GTTGTGTTGGACAATTTCAACATGTCGCTGGGCTCGGGCCTCTCGAAGGTCGCCGGCAAGGTGTTCCGCATCGGCCATCT CGGCGAGTGCAACGAACTCACCCTGATGGCGGCGTTGAGTGGCGTTGAAATGGGCTTGCGCGTCGCCGGCGTGCCGCATC GTGGCGGCGGCGTCGATGCCGCGATGGCGCTGTTGGAGCAGCCGCTGCCCGGCAACGCGCCGCGGCATCTCGCAGTCGTG AAGTAG
Upstream 100 bases:
>100_bases ATGAGGTCGATCTCATATATGAATGCATTAATTTCTTGTATTACTATATTTTGAATGCAATTGTTGGTGTCATAATGCCG CTTGTTCTCGGAGTTCTGCC
Downstream 100 bases:
>100_bases GGTCGGAGCACGTGCAGCGCCGCGCCAGCCCCGGTCATGCCGCGCTGCACATAAATGGGAGATCTGTGTGTTGCTGAGAG ATGCCAGCCCGAAGCCATCG
Product: Serine-glyoxylate aminotransferase
Products: NA
Alternate protein names: SGAT [H]
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MTRHQGRHFLHIPGPSPVPERVLRAMDMPVIDHRSAEFAELGKAVLSGSQKIFKTTGPVIIYPSSGTGAWEAAIVNTLSP GDRVLMVETGHFATLWRQMAARWGIEVDFIPGDWRRGVDPAAIEEKLTADTAHQFKAVMVVHNETSTGATSRIGEVRAAM DRAGHPALLMVDTISGLASADFRFDEWKVDVAVSCSQKGFMLPPGLGFNAVSDKARAVAKANKMPRSFWDWEDMLKLNAN GFFPYTPATNLLYGLREAIAMLLEEGLEQVFARHQKLAAATRAAVEHWGLDVLCQEPRDYSPVLTAVLMPPGHDADQFRQ VVLDNFNMSLGSGLSKVAGKVFRIGHLGECNELTLMAALSGVEMGLRVAGVPHRGGGVDAAMALLEQPLPGNAPRHLAVV K
Sequences:
>Translated_401_residues MTRHQGRHFLHIPGPSPVPERVLRAMDMPVIDHRSAEFAELGKAVLSGSQKIFKTTGPVIIYPSSGTGAWEAAIVNTLSP GDRVLMVETGHFATLWRQMAARWGIEVDFIPGDWRRGVDPAAIEEKLTADTAHQFKAVMVVHNETSTGATSRIGEVRAAM DRAGHPALLMVDTISGLASADFRFDEWKVDVAVSCSQKGFMLPPGLGFNAVSDKARAVAKANKMPRSFWDWEDMLKLNAN GFFPYTPATNLLYGLREAIAMLLEEGLEQVFARHQKLAAATRAAVEHWGLDVLCQEPRDYSPVLTAVLMPPGHDADQFRQ VVLDNFNMSLGSGLSKVAGKVFRIGHLGECNELTLMAALSGVEMGLRVAGVPHRGGGVDAAMALLEQPLPGNAPRHLAVV K >Mature_400_residues TRHQGRHFLHIPGPSPVPERVLRAMDMPVIDHRSAEFAELGKAVLSGSQKIFKTTGPVIIYPSSGTGAWEAAIVNTLSPG DRVLMVETGHFATLWRQMAARWGIEVDFIPGDWRRGVDPAAIEEKLTADTAHQFKAVMVVHNETSTGATSRIGEVRAAMD RAGHPALLMVDTISGLASADFRFDEWKVDVAVSCSQKGFMLPPGLGFNAVSDKARAVAKANKMPRSFWDWEDMLKLNANG FFPYTPATNLLYGLREAIAMLLEEGLEQVFARHQKLAAATRAAVEHWGLDVLCQEPRDYSPVLTAVLMPPGHDADQFRQV VLDNFNMSLGSGLSKVAGKVFRIGHLGECNELTLMAALSGVEMGLRVAGVPHRGGGVDAAMALLEQPLPGNAPRHLAVVK
Specific function: Unknown
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=351, Percent_Identity=29.0598290598291, Blast_Score=146, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17536281, Length=350, Percent_Identity=28.8571428571429, Blast_Score=128, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6321079, Length=365, Percent_Identity=27.9452054794521, Blast_Score=117, Evalue=4e-27, Organism=Drosophila melanogaster, GI17530823, Length=348, Percent_Identity=30.7471264367816, Blast_Score=155, Evalue=5e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.45 [H]
Molecular weight: Translated: 43542; Mature: 43410
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRHQGRHFLHIPGPSPVPERVLRAMDMPVIDHRSAEFAELGKAVLSGSQKIFKTTGPVI CCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHEEECCCCEE IYPSSGTGAWEAAIVNTLSPGDRVLMVETGHFATLWRQMAARWGIEVDFIPGDWRRGVDP EEECCCCCCCHHHHEECCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEECCCHHHCCCCH AAIEEKLTADTAHQFKAVMVVHNETSTGATSRIGEVRAAMDRAGHPALLMVDTISGLASA HHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHC DFRFDEWKVDVAVSCSQKGFMLPPGLGFNAVSDKARAVAKANKMPRSFWDWEDMLKLNAN CCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHEECCC GFFPYTPATNLLYGLREAIAMLLEEGLEQVFARHQKLAAATRAAVEHWGLDVLCQEPRDY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC SPVLTAVLMPPGHDADQFRQVVLDNFNMSLGSGLSKVAGKVFRIGHLGECNELTLMAALS CCEEEEEECCCCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHEEECCCCCCCHHHHHHHHH GVEMGLRVAGVPHRGGGVDAAMALLEQPLPGNAPRHLAVVK HHHHCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEC >Mature Secondary Structure TRHQGRHFLHIPGPSPVPERVLRAMDMPVIDHRSAEFAELGKAVLSGSQKIFKTTGPVI CCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHEEECCCCEE IYPSSGTGAWEAAIVNTLSPGDRVLMVETGHFATLWRQMAARWGIEVDFIPGDWRRGVDP EEECCCCCCCHHHHEECCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEECCCHHHCCCCH AAIEEKLTADTAHQFKAVMVVHNETSTGATSRIGEVRAAMDRAGHPALLMVDTISGLASA HHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHC DFRFDEWKVDVAVSCSQKGFMLPPGLGFNAVSDKARAVAKANKMPRSFWDWEDMLKLNAN CCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHEECCC GFFPYTPATNLLYGLREAIAMLLEEGLEQVFARHQKLAAATRAAVEHWGLDVLCQEPRDY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC SPVLTAVLMPPGHDADQFRQVVLDNFNMSLGSGLSKVAGKVFRIGHLGECNELTLMAALS CCEEEEEECCCCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHEEECCCCCCCHHHHHHHHH GVEMGLRVAGVPHRGGGVDAAMALLEQPLPGNAPRHLAVVK HHHHCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8144463 [H]