| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342126
Identifier: 146342126
GI number: 146342126
Start: 5483820
End: 5485340
Strand: Reverse
Name: 146342126
Synonym: BRADO5273
Alternate gene names: NA
Gene position: 5485340-5483820 (Counterclockwise)
Preceding gene: 146342127
Following gene: 146342116
Centisome position: 73.56
GC content: 66.14
Gene sequence:
>1521_bases ATGGAAGCCTTGGGTCTGCTGCTGCACGGGTTCGCGGTCCTCCTGACCTGGAAGACGCTGCTCTTGATGATGGTCGGGCT GGTGCTCGGCGTCTTCGTCGGCGTGTTGCCGGGGCTCGGCGGCCCCAACGGCGTCGCCATCCTGCTGCCGCTGACCTTCT CGATGGACCCGACCTCGGCCATCGTGATGCTGTCCTGCATCTATTGGGGCGCGCTGTTCGGCGGCGCCATCACCTCGATC CTTTTCAACATCCCCGGCGAGGCCTGGTCGGTCGCGACCACCTTCGACGGCTATCCGATGGCGCAGCAGGGCAAGGCCGC GGAGGCGCTGACGGCGGCGTTCACCTCGTCCTTCATCGGATCGCTGGTCGCGGTGCTCTTGATCACCTTCCTGGCGCCAT GGATCTCGTCCTTCGCGCTGAAGTTCGGCCCGCCCGAGTTCTTCGCCGTCTATCTGCTCACCTTCTGCTCGTTCGTCGGC CTGGGGCGCGAGGACAAGCACAAGACCGTCATCGCGATGTCGCTCGGCCTGCTGCTCGCCGGCGTCGGCATGGACACGGT GTCGGGCCAGCTGCGCATGACCTTCGGCTCGACTGATCTCTTGCGCGGCATCAACTTCCTGGTCGCCGTGATCGGCTTGT TCGGCATCAGCGAGATCCTGCTGACGATGGAGGAGCGCCTGGCGCTGCGCGGCCACGCCGCGTCGATCTCGCTGCGCACG GTGCTCGCGGTGTGGATGGACCTACCGAAATACTGGATGACGCTGCTGCGCTCGTCGGTGATCGGCTGCTGGCTCGGCAT CACCCCGGGCGGCGCGATCGCCGCCTCCTTCATGGGCTACAACCTCGCCAAGCGCTTCGCCAAGGACCAAGACAGTTTTG GTAAGGGCCGCATCGAGGGCGTGTTCGCGCCCGAGACGGCTGCGCATGCCTCGGGCACCGCGGCGCTGCTGCCGATGCTG GCGCTCGGCATTCCCGGCTCGGGCACCGCGGCGATCCTGCTCGGCGGCCTGATGGTCTGGGGCCTCAATCCCGGACCGCT CTTGTTCGTCGAGCACAAGGATTTCGTCTGGGGCCTGATCGCCTCGATGTATCTCGGCAACGTCGTCGGCCTCGTGCTGG TGCTTTCCACCGTGCCGATCTTCGCGTCGATCCTGCGCGTGCCGTTCGCGGCTGTCGCGCCGATGATCGTGGTGTCCTGC GCCATCGGCGCCTATGCGATCCAGAACGCGATGTTTGACGTCTGGCTGATGCTCGGCTTCGGCGTCGTCGGCTACGTCTT CAAGAAGATCAAGATTCCGCTGGCGCCGTTCACGCTTGCGCTGGTGCTCGGCAGCCGCGCCGAGGACGCGTTCCGGCAGT CGATGATCATCTCCGGCGGCAACATGAAGGTGTTCTGGGCGAACGGCCTGGTCGGGACCATCACGACGCTGGCCATCGTG CTCTTGTTCTGGCCGCTGATCGACCGGCTGGTGGCGAGCTTCGGCAAAGCGAGCCCGCCGCCAGCGAAGGCGGAGGCGTA G
Upstream 100 bases:
>100_bases GTGCTGCGCTCTCGACTCTGGATTGCTTCCGCCTACGCCCGGTGGGCTTCGGCGGACACGTCGCTGCTGGCAATGACGAC GAACTAGCTGGAATGGAATC
Downstream 100 bases:
>100_bases AGCGCCTTCTTCGAAATACTTGTCATTCCCTGGCAAGGCCGCAGGCCTCGCACCCGGAATTTCTAGCTTGCAGGTCGAAC GAGTGTGGCGCGGATGCCAC
Product: putative TctA subunit of the tripartite tricarboxylate transport(TTT) family
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MEALGLLLHGFAVLLTWKTLLLMMVGLVLGVFVGVLPGLGGPNGVAILLPLTFSMDPTSAIVMLSCIYWGALFGGAITSI LFNIPGEAWSVATTFDGYPMAQQGKAAEALTAAFTSSFIGSLVAVLLITFLAPWISSFALKFGPPEFFAVYLLTFCSFVG LGREDKHKTVIAMSLGLLLAGVGMDTVSGQLRMTFGSTDLLRGINFLVAVIGLFGISEILLTMEERLALRGHAASISLRT VLAVWMDLPKYWMTLLRSSVIGCWLGITPGGAIAASFMGYNLAKRFAKDQDSFGKGRIEGVFAPETAAHASGTAALLPML ALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLVLVLSTVPIFASILRVPFAAVAPMIVVSC AIGAYAIQNAMFDVWLMLGFGVVGYVFKKIKIPLAPFTLALVLGSRAEDAFRQSMIISGGNMKVFWANGLVGTITTLAIV LLFWPLIDRLVASFGKASPPPAKAEA
Sequences:
>Translated_506_residues MEALGLLLHGFAVLLTWKTLLLMMVGLVLGVFVGVLPGLGGPNGVAILLPLTFSMDPTSAIVMLSCIYWGALFGGAITSI LFNIPGEAWSVATTFDGYPMAQQGKAAEALTAAFTSSFIGSLVAVLLITFLAPWISSFALKFGPPEFFAVYLLTFCSFVG LGREDKHKTVIAMSLGLLLAGVGMDTVSGQLRMTFGSTDLLRGINFLVAVIGLFGISEILLTMEERLALRGHAASISLRT VLAVWMDLPKYWMTLLRSSVIGCWLGITPGGAIAASFMGYNLAKRFAKDQDSFGKGRIEGVFAPETAAHASGTAALLPML ALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLVLVLSTVPIFASILRVPFAAVAPMIVVSC AIGAYAIQNAMFDVWLMLGFGVVGYVFKKIKIPLAPFTLALVLGSRAEDAFRQSMIISGGNMKVFWANGLVGTITTLAIV LLFWPLIDRLVASFGKASPPPAKAEA >Mature_506_residues MEALGLLLHGFAVLLTWKTLLLMMVGLVLGVFVGVLPGLGGPNGVAILLPLTFSMDPTSAIVMLSCIYWGALFGGAITSI LFNIPGEAWSVATTFDGYPMAQQGKAAEALTAAFTSSFIGSLVAVLLITFLAPWISSFALKFGPPEFFAVYLLTFCSFVG LGREDKHKTVIAMSLGLLLAGVGMDTVSGQLRMTFGSTDLLRGINFLVAVIGLFGISEILLTMEERLALRGHAASISLRT VLAVWMDLPKYWMTLLRSSVIGCWLGITPGGAIAASFMGYNLAKRFAKDQDSFGKGRIEGVFAPETAAHASGTAALLPML ALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLVLVLSTVPIFASILRVPFAAVAPMIVVSC AIGAYAIQNAMFDVWLMLGFGVVGYVFKKIKIPLAPFTLALVLGSRAEDAFRQSMIISGGNMKVFWANGLVGTITTLAIV LLFWPLIDRLVASFGKASPPPAKAEA
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 53453; Mature: 53453
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEALGLLLHGFAVLLTWKTLLLMMVGLVLGVFVGVLPGLGGPNGVAILLPLTFSMDPTSA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHH IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYPMAQQGKAAEALTAAFTSSFIG HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH SLVAVLLITFLAPWISSFALKFGPPEFFAVYLLTFCSFVGLGREDKHKTVIAMSLGLLLA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH GVGMDTVSGQLRMTFGSTDLLRGINFLVAVIGLFGISEILLTMEERLALRGHAASISLRT HCCCHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VLAVWMDLPKYWMTLLRSSVIGCWLGITPGGAIAASFMGYNLAKRFAKDQDSFGKGRIEG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE VFAPETAAHASGTAALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLI EECCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHH ASMYLGNVVGLVLVLSTVPIFASILRVPFAAVAPMIVVSCAIGAYAIQNAMFDVWLMLGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVVGYVFKKIKIPLAPFTLALVLGSRAEDAFRQSMIISGGNMKVFWANGLVGTITTLAIV HHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHEEECCCEEEEECCCHHHHHHHHHHH LLFWPLIDRLVASFGKASPPPAKAEA HHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MEALGLLLHGFAVLLTWKTLLLMMVGLVLGVFVGVLPGLGGPNGVAILLPLTFSMDPTSA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHH IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYPMAQQGKAAEALTAAFTSSFIG HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH SLVAVLLITFLAPWISSFALKFGPPEFFAVYLLTFCSFVGLGREDKHKTVIAMSLGLLLA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH GVGMDTVSGQLRMTFGSTDLLRGINFLVAVIGLFGISEILLTMEERLALRGHAASISLRT HCCCHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VLAVWMDLPKYWMTLLRSSVIGCWLGITPGGAIAASFMGYNLAKRFAKDQDSFGKGRIEG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE VFAPETAAHASGTAALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLI EECCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHH ASMYLGNVVGLVLVLSTVPIFASILRVPFAAVAPMIVVSCAIGAYAIQNAMFDVWLMLGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVVGYVFKKIKIPLAPFTLALVLGSRAEDAFRQSMIISGGNMKVFWANGLVGTITTLAIV HHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHEEECCCEEEEECCCHHHHHHHHHHH LLFWPLIDRLVASFGKASPPPAKAEA HHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]