| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is braE [H]
Identifier: 146342120
GI number: 146342120
Start: 5476908
End: 5477981
Strand: Direct
Name: braE [H]
Synonym: BRADO5266
Alternate gene names: 146342120
Gene position: 5476908-5477981 (Clockwise)
Preceding gene: 146342119
Following gene: 146342121
Centisome position: 73.45
GC content: 62.1
Gene sequence:
>1074_bases ATGGTTGCACGCTCCACCATTCCCGCCGGTGACTTCCGCACCTCCTACGCGGCCGACACCACGATCTTCCCCACAAAGAC GAGCCGCAACTTCGCGATCGCCGGCGTGATCCTGCTGTGCTTCGCGCCGCAAGTGTTCTCGGAGTTTTGGCTGTCGATCG CGATCCAGATCGGCATCTTCTCGATCGCTGCCCTCGGCCTGAACATCCTGGTCGGCTTCACCGGCCAGATCTCGATCGGC CAGGCCGGCTTCTTCCTGCTCGGTGCCTTCACCTCGGCCTACATCAACAACACCTATGCGATCCCGGTGTTCTTCGCGAT CCCGCTCGCCGGCGTCATCACCGCGCTGGTCGGGCTCGTGTTCGGTCTACCGGCGGCGCGATTGAAGGGGCTCTATCTCG TCATCGCGACGCTGGCCGCGCAATACATCCTGCTCGACTTCTTCTCCCGCGCCGAATGGTTCTCCGGCGGTTCGGTGCCC GCCTCGGCCAATCCGTTCTCGATCTTCGGCTACACGCTGCGCGGCGACCGGCAATATTTCTACGTCGTCCTCGCTTATGT GCTGGTCTGCTACATCCTGGTCACCAATCTGATGCGCACCCGCGACGGCCGCGCGCTGATCGCGATCCGCGATCATTATC TCTCGGCCGAGATCATGGGCATCAACCTGACCAAGTACCGCACGCTGTCGTTCGGGCTGGCCGCCTTCTTCGCAGGGATC GCCGGCGCGCTCTACGCGCATTACCAGCTGGTGGTCTCACAAGAAGGATTCGGCATCGAGCGCTCGATCCTGTTCCTGGC GATGATCATCATCGGCGGCACCGGCTCGATCATGGGCACCCTGATGGGAACCGCCTTCGTCGTGCTGCTGCCGGAATCGA TGGAATTGCTGAGCCACTACCTCAAGGGCGGCGCGATCGACAAGGCGCTCGCGCTCAACAACAACATCACCTTCCTGCGC GAGATCGCGATCGGCCTGATCATCATCGCCTTCCTGATGTTCGAGCCGGACGGGCTGGCGCATCGCTGGCGGCAGATCAA GACATACTGGAAGCTCTACCCGTTCTCGCATTGA
Upstream 100 bases:
>100_bases CGAAAAGTGGGCACCGGTTTTCGGTAACGATCATGCTCGAACAAAAGAGAAGGGCGAGCCCATGACGCAACTCAAGCCTG AGGCGAGATAGAAGCCCATC
Downstream 100 bases:
>100_bases TTCCAACCAACAGGGACCGGCGACAATCCGGCCCGGAACGCACCACAGGAGGAAGCACTATGACGATCAAATCATGGCTC GGCTCGGCGGCACTGGCGCT
Product: putative high-affinity branched-chain amino acid transport system permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MVARSTIPAGDFRTSYAADTTIFPTKTSRNFAIAGVILLCFAPQVFSEFWLSIAIQIGIFSIAALGLNILVGFTGQISIG QAGFFLLGAFTSAYINNTYAIPVFFAIPLAGVITALVGLVFGLPAARLKGLYLVIATLAAQYILLDFFSRAEWFSGGSVP ASANPFSIFGYTLRGDRQYFYVVLAYVLVCYILVTNLMRTRDGRALIAIRDHYLSAEIMGINLTKYRTLSFGLAAFFAGI AGALYAHYQLVVSQEGFGIERSILFLAMIIIGGTGSIMGTLMGTAFVVLLPESMELLSHYLKGGAIDKALALNNNITFLR EIAIGLIIIAFLMFEPDGLAHRWRQIKTYWKLYPFSH
Sequences:
>Translated_357_residues MVARSTIPAGDFRTSYAADTTIFPTKTSRNFAIAGVILLCFAPQVFSEFWLSIAIQIGIFSIAALGLNILVGFTGQISIG QAGFFLLGAFTSAYINNTYAIPVFFAIPLAGVITALVGLVFGLPAARLKGLYLVIATLAAQYILLDFFSRAEWFSGGSVP ASANPFSIFGYTLRGDRQYFYVVLAYVLVCYILVTNLMRTRDGRALIAIRDHYLSAEIMGINLTKYRTLSFGLAAFFAGI AGALYAHYQLVVSQEGFGIERSILFLAMIIIGGTGSIMGTLMGTAFVVLLPESMELLSHYLKGGAIDKALALNNNITFLR EIAIGLIIIAFLMFEPDGLAHRWRQIKTYWKLYPFSH >Mature_357_residues MVARSTIPAGDFRTSYAADTTIFPTKTSRNFAIAGVILLCFAPQVFSEFWLSIAIQIGIFSIAALGLNILVGFTGQISIG QAGFFLLGAFTSAYINNTYAIPVFFAIPLAGVITALVGLVFGLPAARLKGLYLVIATLAAQYILLDFFSRAEWFSGGSVP ASANPFSIFGYTLRGDRQYFYVVLAYVLVCYILVTNLMRTRDGRALIAIRDHYLSAEIMGINLTKYRTLSFGLAAFFAGI AGALYAHYQLVVSQEGFGIERSILFLAMIIIGGTGSIMGTLMGTAFVVLLPESMELLSHYLKGGAIDKALALNNNITFLR EIAIGLIIIAFLMFEPDGLAHRWRQIKTYWKLYPFSH
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=282, Percent_Identity=29.7872340425532, Blast_Score=102, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 39016; Mature: 39016
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVARSTIPAGDFRTSYAADTTIFPTKTSRNFAIAGVILLCFAPQVFSEFWLSIAIQIGIF CCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH SIAALGLNILVGFTGQISIGQAGFFLLGAFTSAYINNTYAIPVFFAIPLAGVITALVGLV HHHHHHHHHEEECCCEEEECCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHH FGLPAARLKGLYLVIATLAAQYILLDFFSRAEWFSGGSVPASANPFSIFGYTLRGDRQYF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCHHH YVVLAYVLVCYILVTNLMRTRDGRALIAIRDHYLSAEIMGINLTKYRTLSFGLAAFFAGI HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHH AGALYAHYQLVVSQEGFGIERSILFLAMIIIGGTGSIMGTLMGTAFVVLLPESMELLSHY HHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCHHHHHHHHH LKGGAIDKALALNNNITFLREIAIGLIIIAFLMFEPDGLAHRWRQIKTYWKLYPFSH HCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVARSTIPAGDFRTSYAADTTIFPTKTSRNFAIAGVILLCFAPQVFSEFWLSIAIQIGIF CCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH SIAALGLNILVGFTGQISIGQAGFFLLGAFTSAYINNTYAIPVFFAIPLAGVITALVGLV HHHHHHHHHEEECCCEEEECCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHH FGLPAARLKGLYLVIATLAAQYILLDFFSRAEWFSGGSVPASANPFSIFGYTLRGDRQYF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCHHH YVVLAYVLVCYILVTNLMRTRDGRALIAIRDHYLSAEIMGINLTKYRTLSFGLAAFFAGI HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHH AGALYAHYQLVVSQEGFGIERSILFLAMIIIGGTGSIMGTLMGTAFVVLLPESMELLSHY HHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCHHHHHHHHH LKGGAIDKALALNNNITFLREIAIGLIIIAFLMFEPDGLAHRWRQIKTYWKLYPFSH HCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]