Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is metK [H]
Identifier: 146342096
GI number: 146342096
Start: 5451792
End: 5452991
Strand: Reverse
Name: metK [H]
Synonym: BRADO5239
Alternate gene names: 146342096
Gene position: 5452991-5451792 (Counterclockwise)
Preceding gene: 146342097
Following gene: 146342095
Centisome position: 73.13
GC content: 66.67
Gene sequence:
>1200_bases TTGATGCGCGCGTCATATCTGTTCACCTCGGAATCGGTGTCCGAGGGCCATCCGGACAAGGTCTGTGACCGGATCTCGGA CGAGATCGTCGACCTGTTCTACCGTGAAGGGCCGAAGGCCGGCATCGACCCCTGGCAGATCCGCGCCGCCTGCGAGACGC TCGCCACCACCAACAAGGTCGTGATCGCCGGCGAGACCCGCGGCCCGTCCTCGGTGACGAATGAGCACATCGAGCACGTC GTCCGCGAGGCGATCAAGGATATCGGCTATGAGCAGGAGGGCTTCCACTGGAAGACCTGCGACATCGAGATCCTCCTGCA TCCGCAGTCGGCCGACATCGCGCAGGGCGTCGACGCGCTGCAGCCGGGCGAAGTCAAGGAAGAGGGCGCCGGCGACCAGG GCATCATGTTCGGCTACGCCTGCAACGAGACGCCCGACCTCATGCCGGCGCCGATCTTCTATGCCCACAAGATCCTGCGC ATGATCGCCGAAGCCCGGCATTCCGGCGTCGAGAAGGTGCTGGGCCCGGATTCCAAGAGCCAGGTCACCGTGCGCTATGA GAATGGCAAGCCGGTCGGCGTGCGCGAGATCGTCGTCTCGCACCAGCACCTGATCCCGGATATGACCTCGGCGCAGGTGC GCGAGCGGGTCGAGCCCTATGTGCGCGAGGCGCTGCCGAAGGACTGGATCACCAAGGACACGATCTGGCACATCAACCCG ACCGGCAAGTTCTACATCGGCGGCCCCGATGGCGACACCGGCCTCACGGGCCGCAAGATCATCGTCGACACGTATGGTGG CGCGGCCCCGCATGGCGGCGGCGCGTTCTCCGGCAAGGACCCGACCAAGGTCGACCGCTCGGCCGCCTATGCGGCGCGCT ACCTCGCCAAGAACATCGTGGCCGCCGGCCTCGCCGATCGCTGCACGCTGCAGCTCGCCTACGCCATCGGCGTGGCGCGG CCGCTGTCGATCTACATCGACACCCACGGCACCGGTAAGGTCTCCGAGGACAAGCTCGAGAAGGCGGCGGCCGAGGTGAT GAACCTCACCCCGCGCGGCATCCGCTCGCATCTCGACCTCAACCGTCCGATCTACGCGCGCACCGCGGCGTATGGCCATT TCGGCCGCACGCCCGACAACGAGGGCGGCTTCTCCTGGGAGAAGACCGACCTCGCCGAGGCGTTCAAGCGCGCGGTGTAG
Upstream 100 bases:
>100_bases CGAGTCCTACGTCATCTCGCGGCGTCGCGACTGACATCCTGGGATCAGGACATTTGGGATCAATACGAACGACCGCCGTG GGCGGCAAAGAAGGGATTGC
Downstream 100 bases:
>100_bases TTGCTACTTCACCTCTCCCCGCCAGGGCGAAGCGAAGCTTCGCGGGGGCGGGGAAAGGTCGGATTGCACCGAAGATGCAA TCCGGGTGAGGGGACTCTCC
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MMRASYLFTSESVSEGHPDKVCDRISDEIVDLFYREGPKAGIDPWQIRAACETLATTNKVVIAGETRGPSSVTNEHIEHV VREAIKDIGYEQEGFHWKTCDIEILLHPQSADIAQGVDALQPGEVKEEGAGDQGIMFGYACNETPDLMPAPIFYAHKILR MIAEARHSGVEKVLGPDSKSQVTVRYENGKPVGVREIVVSHQHLIPDMTSAQVRERVEPYVREALPKDWITKDTIWHINP TGKFYIGGPDGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYAARYLAKNIVAAGLADRCTLQLAYAIGVAR PLSIYIDTHGTGKVSEDKLEKAAAEVMNLTPRGIRSHLDLNRPIYARTAAYGHFGRTPDNEGGFSWEKTDLAEAFKRAV
Sequences:
>Translated_399_residues MMRASYLFTSESVSEGHPDKVCDRISDEIVDLFYREGPKAGIDPWQIRAACETLATTNKVVIAGETRGPSSVTNEHIEHV VREAIKDIGYEQEGFHWKTCDIEILLHPQSADIAQGVDALQPGEVKEEGAGDQGIMFGYACNETPDLMPAPIFYAHKILR MIAEARHSGVEKVLGPDSKSQVTVRYENGKPVGVREIVVSHQHLIPDMTSAQVRERVEPYVREALPKDWITKDTIWHINP TGKFYIGGPDGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYAARYLAKNIVAAGLADRCTLQLAYAIGVAR PLSIYIDTHGTGKVSEDKLEKAAAEVMNLTPRGIRSHLDLNRPIYARTAAYGHFGRTPDNEGGFSWEKTDLAEAFKRAV >Mature_399_residues MMRASYLFTSESVSEGHPDKVCDRISDEIVDLFYREGPKAGIDPWQIRAACETLATTNKVVIAGETRGPSSVTNEHIEHV VREAIKDIGYEQEGFHWKTCDIEILLHPQSADIAQGVDALQPGEVKEEGAGDQGIMFGYACNETPDLMPAPIFYAHKILR MIAEARHSGVEKVLGPDSKSQVTVRYENGKPVGVREIVVSHQHLIPDMTSAQVRERVEPYVREALPKDWITKDTIWHINP TGKFYIGGPDGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYAARYLAKNIVAAGLADRCTLQLAYAIGVAR PLSIYIDTHGTGKVSEDKLEKAAAEVMNLTPRGIRSHLDLNRPIYARTAAYGHFGRTPDNEGGFSWEKTDLAEAFKRAV
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI5174529, Length=392, Percent_Identity=48.9795918367347, Blast_Score=330, Evalue=2e-90, Organism=Homo sapiens, GI4557737, Length=389, Percent_Identity=48.8431876606684, Blast_Score=327, Evalue=1e-89, Organism=Escherichia coli, GI1789311, Length=398, Percent_Identity=52.7638190954774, Blast_Score=386, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17538498, Length=395, Percent_Identity=47.5949367088608, Blast_Score=325, Evalue=3e-89, Organism=Caenorhabditis elegans, GI17538494, Length=395, Percent_Identity=47.5949367088608, Blast_Score=322, Evalue=2e-88, Organism=Caenorhabditis elegans, GI25145633, Length=395, Percent_Identity=46.8354430379747, Blast_Score=322, Evalue=2e-88, Organism=Caenorhabditis elegans, GI17551082, Length=394, Percent_Identity=46.1928934010152, Blast_Score=322, Evalue=2e-88, Organism=Caenorhabditis elegans, GI32565905, Length=393, Percent_Identity=44.2748091603053, Blast_Score=283, Evalue=9e-77, Organism=Caenorhabditis elegans, GI32565911, Length=316, Percent_Identity=49.6835443037975, Blast_Score=272, Evalue=2e-73, Organism=Caenorhabditis elegans, GI25145635, Length=316, Percent_Identity=48.7341772151899, Blast_Score=268, Evalue=4e-72, Organism=Caenorhabditis elegans, GI32565903, Length=302, Percent_Identity=49.3377483443709, Blast_Score=255, Evalue=3e-68, Organism=Caenorhabditis elegans, GI32565909, Length=91, Percent_Identity=41.7582417582418, Blast_Score=73, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320710, Length=391, Percent_Identity=46.5473145780051, Blast_Score=320, Evalue=3e-88, Organism=Saccharomyces cerevisiae, GI6323209, Length=394, Percent_Identity=45.6852791878173, Blast_Score=316, Evalue=4e-87, Organism=Drosophila melanogaster, GI45552159, Length=391, Percent_Identity=49.1048593350384, Blast_Score=314, Evalue=6e-86, Organism=Drosophila melanogaster, GI24580529, Length=391, Percent_Identity=49.1048593350384, Blast_Score=314, Evalue=6e-86, Organism=Drosophila melanogaster, GI24580537, Length=391, Percent_Identity=49.1048593350384, Blast_Score=314, Evalue=6e-86, Organism=Drosophila melanogaster, GI24580533, Length=391, Percent_Identity=49.1048593350384, Blast_Score=314, Evalue=6e-86, Organism=Drosophila melanogaster, GI24580535, Length=391, Percent_Identity=49.1048593350384, Blast_Score=314, Evalue=6e-86, Organism=Drosophila melanogaster, GI24580531, Length=391, Percent_Identity=49.1048593350384, Blast_Score=314, Evalue=6e-86, Organism=Drosophila melanogaster, GI24580527, Length=391, Percent_Identity=48.5933503836317, Blast_Score=312, Evalue=3e-85, Organism=Drosophila melanogaster, GI24580525, Length=391, Percent_Identity=48.5933503836317, Blast_Score=312, Evalue=3e-85, Organism=Drosophila melanogaster, GI24580541, Length=390, Percent_Identity=46.4102564102564, Blast_Score=287, Evalue=9e-78, Organism=Drosophila melanogaster, GI24580539, Length=132, Percent_Identity=42.4242424242424, Blast_Score=99, Evalue=4e-21,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 43683; Mature: 43683
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRASYLFTSESVSEGHPDKVCDRISDEIVDLFYREGPKAGIDPWQIRAACETLATTNKV CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEE VIAGETRGPSSVTNEHIEHVVREAIKDIGYEQEGFHWKTCDIEILLHPQSADIAQGVDAL EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCHHHHCCCCC QPGEVKEEGAGDQGIMFGYACNETPDLMPAPIFYAHKILRMIAEARHSGVEKVLGPDSKS CCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCCCC QVTVRYENGKPVGVREIVVSHQHLIPDMTSAQVRERVEPYVREALPKDWITKDTIWHINP EEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC TGKFYIGGPDGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYAARYLAKNIV CCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AAGLADRCTLQLAYAIGVARPLSIYIDTHGTGKVSEDKLEKAAAEVMNLTPRGIRSHLDL HHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCC NRPIYARTAAYGHFGRTPDNEGGFSWEKTDLAEAFKRAV CCCEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MMRASYLFTSESVSEGHPDKVCDRISDEIVDLFYREGPKAGIDPWQIRAACETLATTNKV CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEE VIAGETRGPSSVTNEHIEHVVREAIKDIGYEQEGFHWKTCDIEILLHPQSADIAQGVDAL EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCHHHHCCCCC QPGEVKEEGAGDQGIMFGYACNETPDLMPAPIFYAHKILRMIAEARHSGVEKVLGPDSKS CCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCCCC QVTVRYENGKPVGVREIVVSHQHLIPDMTSAQVRERVEPYVREALPKDWITKDTIWHINP EEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC TGKFYIGGPDGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYAARYLAKNIV CCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AAGLADRCTLQLAYAIGVARPLSIYIDTHGTGKVSEDKLEKAAAEVMNLTPRGIRSHLDL HHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCC NRPIYARTAAYGHFGRTPDNEGGFSWEKTDLAEAFKRAV CCCEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA