| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is livK [C]
Identifier: 146342001
GI number: 146342001
Start: 5336758
End: 5337918
Strand: Direct
Name: livK [C]
Synonym: BRADO5137
Alternate gene names: 146342001
Gene position: 5336758-5337918 (Clockwise)
Preceding gene: 146341999
Following gene: 146342009
Centisome position: 71.57
GC content: 66.15
Gene sequence:
>1161_bases ATGAACTGGTTCTCAAGCTTCCGGACATCCCTTGTCCTCATCCTGCTCGCGGGACTGCTTCCGCTCGGGTCTGCGCGCGC CGACGAGCTCGGCGTCACCAATGATTCGATCCTGTTCGGGCAGGTTGCGGCGCTGGAGGGTCCGTCGGCTGCGCTCGGTC AGGCGGCGCGCCAGGGGCTGCTGGCGGCGTTCAGCGAGCTCAACGCCAAGGGCGGCGTCTATGGCCGTCGGCTGAAGCTC GCGAGCCGCAACGACGGCTACGATCCCGACCGCTCCGTGGTCGAGACCATCAAGCTGATCTACGAGGACAAGGTGTTCGC ATTGATCGGCGCCGTCGGCACGCCGACCGCGATGGCCACCGCGCCGATCGCGGCCTCGAACGACGTGCCGTTCATCGGTC CGGTGTCCGGCGCCGAATTCCTGCGCACGCCTGATTTTCAGAACATCGTCAACATTCGCGCGAGCTACGCGGCCGAGGCG GAAGCTTCGATCAAGCACCTCACCGAAGACCTGCGTCTGACGCGCATCGCCATCTTCTATCAGGATGACGCGTTTGGCCG CGACGTGCTGGCGGGCGTGAAGACCCATCTCGACAAACGCGGCCTGGAGCTGGCCGCCGAAGGCACCTTCGAGCGCAATA CGCGCGCCGTCGGCGCGGCGCTCAAGGTGATCCGCCGTGCCGAGCCGGAGGCCGTCATCCTCGTCGGCACCTACGGGCCA TGCGCCGAGTTCATCAAGATGGCGCACCGGAGCGGCTTCAACCCGACCTTCTCGGCCGTGTCCTTCGTCGGCGGCAACGC GCTCGCCAAGGAGCTCGGCTCGGAAGGGCGTGGCGTCATCGTCTCCGAGGTGGTGCCCTTCCCGTGGGACACCGATCGCC GGATCGTCGCCGACTATCAGGCGGCGATGAAGGAGCTCGATCCGAGCCAGACACCCGACTTCATCGGGCTCGAAGGCTAC ATTACCGGGCGTCTTGTGGCGCGCGCGCTGGCGATGACCGGGCCCAATCCGACCCGCGCCGAGCTGCTGCGGATCATCAA CGATGTGGGACAGTTCGACATCGGTGGTCTCGTCGTCAGCTTCGGCAGCGCACGCAAGGATAATCCGCCGCCGGTGTCGC TGGTGGTGATTCAGAGCGACGGCAGCTTCAAGCCGATCTGA
Upstream 100 bases:
>100_bases CGTAAAACGCGATCAAGCCGGCGGTACGTCTTTAGCGAGGTCTTCATTCAACGCGTGTAGGCTCGATCTCATCAAGCGCA CCCGTGCATCGAAGATCGCA
Downstream 100 bases:
>100_bases CCACGCCTCAGCTCGCAGGTTTAGCTCGAAGGCTCGCTCGAAGATTTAGCTAAGATTTCTTGGGCTTCGGCGGGCCTTCG ACCGGCGGCAGCGATTTCAG
Product: putative extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MNWFSSFRTSLVLILLAGLLPLGSARADELGVTNDSILFGQVAALEGPSAALGQAARQGLLAAFSELNAKGGVYGRRLKL ASRNDGYDPDRSVVETIKLIYEDKVFALIGAVGTPTAMATAPIAASNDVPFIGPVSGAEFLRTPDFQNIVNIRASYAAEA EASIKHLTEDLRLTRIAIFYQDDAFGRDVLAGVKTHLDKRGLELAAEGTFERNTRAVGAALKVIRRAEPEAVILVGTYGP CAEFIKMAHRSGFNPTFSAVSFVGGNALAKELGSEGRGVIVSEVVPFPWDTDRRIVADYQAAMKELDPSQTPDFIGLEGY ITGRLVARALAMTGPNPTRAELLRIINDVGQFDIGGLVVSFGSARKDNPPPVSLVVIQSDGSFKPI
Sequences:
>Translated_386_residues MNWFSSFRTSLVLILLAGLLPLGSARADELGVTNDSILFGQVAALEGPSAALGQAARQGLLAAFSELNAKGGVYGRRLKL ASRNDGYDPDRSVVETIKLIYEDKVFALIGAVGTPTAMATAPIAASNDVPFIGPVSGAEFLRTPDFQNIVNIRASYAAEA EASIKHLTEDLRLTRIAIFYQDDAFGRDVLAGVKTHLDKRGLELAAEGTFERNTRAVGAALKVIRRAEPEAVILVGTYGP CAEFIKMAHRSGFNPTFSAVSFVGGNALAKELGSEGRGVIVSEVVPFPWDTDRRIVADYQAAMKELDPSQTPDFIGLEGY ITGRLVARALAMTGPNPTRAELLRIINDVGQFDIGGLVVSFGSARKDNPPPVSLVVIQSDGSFKPI >Mature_386_residues MNWFSSFRTSLVLILLAGLLPLGSARADELGVTNDSILFGQVAALEGPSAALGQAARQGLLAAFSELNAKGGVYGRRLKL ASRNDGYDPDRSVVETIKLIYEDKVFALIGAVGTPTAMATAPIAASNDVPFIGPVSGAEFLRTPDFQNIVNIRASYAAEA EASIKHLTEDLRLTRIAIFYQDDAFGRDVLAGVKTHLDKRGLELAAEGTFERNTRAVGAALKVIRRAEPEAVILVGTYGP CAEFIKMAHRSGFNPTFSAVSFVGGNALAKELGSEGRGVIVSEVVPFPWDTDRRIVADYQAAMKELDPSQTPDFIGLEGY ITGRLVARALAMTGPNPTRAELLRIINDVGQFDIGGLVVSFGSARKDNPPPVSLVVIQSDGSFKPI
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=335, Percent_Identity=21.7910447761194, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI48994941, Length=301, Percent_Identity=23.9202657807309, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 41150; Mature: 41150
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWFSSFRTSLVLILLAGLLPLGSARADELGVTNDSILFGQVAALEGPSAALGQAARQGL CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHH LAAFSELNAKGGVYGRRLKLASRNDGYDPDRSVVETIKLIYEDKVFALIGAVGTPTAMAT HHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHC APIAASNDVPFIGPVSGAEFLRTPDFQNIVNIRASYAAEAEASIKHLTEDLRLTRIAIFY CCCCCCCCCCEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE QDDAFGRDVLAGVKTHLDKRGLELAAEGTFERNTRAVGAALKVIRRAEPEAVILVGTYGP ECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCH CAEFIKMAHRSGFNPTFSAVSFVGGNALAKELGSEGRGVIVSEVVPFPWDTDRRIVADYQ HHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHH AAMKELDPSQTPDFIGLEGYITGRLVARALAMTGPNPTRAELLRIINDVGQFDIGGLVVS HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHEEE FGSARKDNPPPVSLVVIQSDGSFKPI CCCCCCCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MNWFSSFRTSLVLILLAGLLPLGSARADELGVTNDSILFGQVAALEGPSAALGQAARQGL CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHH LAAFSELNAKGGVYGRRLKLASRNDGYDPDRSVVETIKLIYEDKVFALIGAVGTPTAMAT HHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHC APIAASNDVPFIGPVSGAEFLRTPDFQNIVNIRASYAAEAEASIKHLTEDLRLTRIAIFY CCCCCCCCCCEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE QDDAFGRDVLAGVKTHLDKRGLELAAEGTFERNTRAVGAALKVIRRAEPEAVILVGTYGP ECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCH CAEFIKMAHRSGFNPTFSAVSFVGGNALAKELGSEGRGVIVSEVVPFPWDTDRRIVADYQ HHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHH AAMKELDPSQTPDFIGLEGYITGRLVARALAMTGPNPTRAELLRIINDVGQFDIGGLVVS HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHEEE FGSARKDNPPPVSLVVIQSDGSFKPI CCCCCCCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA