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The map label for this gene is ycaC [H]

Identifier: 146341992

GI number: 146341992

Start: 5327645

End: 5328295

Strand: Reverse

Name: ycaC [H]

Synonym: BRADO5128

Alternate gene names: 146341992

Gene position: 5328295-5327645 (Counterclockwise)

Preceding gene: 146341993

Following gene: 146341991

Centisome position: 71.46

GC content: 64.52

Gene sequence:

>651_bases
ATGTCCAAGCTCGAAATGCTCACCCCGCAGAACTGCGCGGTGGCGCTGATCGACTATCAGCCTGCGATGTATCAGGGCGT
GCAGTCGCACGACCGTCTCGGCGTGTTCAACAACATCCAGATCGTCGCCAAGGCGGCCAAGCTGTTCAAGATCCCGACCG
TGCTCACCACGGTCGCCAAGGATTCGTTCTCGGGCCCGTTCATGCCCGAGGTGACCGAGCTGTTTCCGGAGCATGACATC
GTCGACCGCACGGCGATGAACTCCTGGCTCGACGCCGGCTTCCGCAAGCAGGTCGCCGCCACGGGGCGCAAGAAGTTCAT
CATCGCTGGACTCTGGACCGAGGCCTGCGTGCTGTTTCCGACGCTCGACATGCTGCGCGAGGGCTACGAGGTCTACATCC
CGGCCGATGCGTGCGGCGATCTGTCGCTGGAGGCGCACAACCGCGCGATGGATCGTGCGGTGCAGGCCGGCGCGGTGCCG
ATCACCTCGTGCCAGTTCGCCTTCGAGCTGCAGCAGGATTGGGCGCGCGCCGAAACCTATGACGGCATGATGGAGATCCT
CAAGGCGCATTCGCCCTACGGCATCCAGATCCGCTTCTCGAAATGGGCGCTCGGCGAGCACGCCTCCGAGGGCGGCACCA
AGGCGGCCTGA

Upstream 100 bases:

>100_bases
GTTCATTGGCCTCGGCATCGTCTCATGGCGGCGGTTCGCCCCCGTGGCGCCGCGTGCCTCCCTGGCCTGATCCAATCATC
CACTTCTCGAGGAGAACCAC

Downstream 100 bases:

>100_bases
ATCATCCGATGAAGATCTATCTGTTCTCGCTCGGGGCAGGGCTTCTGGTCGGCGTGATCTACAGCCTGCTTCACGTCCGC
TCGCCGGCGCCGCCTCTGGT

Product: putative isochorismatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSKLEMLTPQNCAVALIDYQPAMYQGVQSHDRLGVFNNIQIVAKAAKLFKIPTVLTTVAKDSFSGPFMPEVTELFPEHDI
VDRTAMNSWLDAGFRKQVAATGRKKFIIAGLWTEACVLFPTLDMLREGYEVYIPADACGDLSLEAHNRAMDRAVQAGAVP
ITSCQFAFELQQDWARAETYDGMMEILKAHSPYGIQIRFSKWALGEHASEGGTKAA

Sequences:

>Translated_216_residues
MSKLEMLTPQNCAVALIDYQPAMYQGVQSHDRLGVFNNIQIVAKAAKLFKIPTVLTTVAKDSFSGPFMPEVTELFPEHDI
VDRTAMNSWLDAGFRKQVAATGRKKFIIAGLWTEACVLFPTLDMLREGYEVYIPADACGDLSLEAHNRAMDRAVQAGAVP
ITSCQFAFELQQDWARAETYDGMMEILKAHSPYGIQIRFSKWALGEHASEGGTKAA
>Mature_215_residues
SKLEMLTPQNCAVALIDYQPAMYQGVQSHDRLGVFNNIQIVAKAAKLFKIPTVLTTVAKDSFSGPFMPEVTELFPEHDIV
DRTAMNSWLDAGFRKQVAATGRKKFIIAGLWTEACVLFPTLDMLREGYEVYIPADACGDLSLEAHNRAMDRAVQAGAVPI
TSCQFAFELQQDWARAETYDGMMEILKAHSPYGIQIRFSKWALGEHASEGGTKAA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=187, Percent_Identity=35.2941176470588, Blast_Score=116, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 23910; Mature: 23778

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLEMLTPQNCAVALIDYQPAMYQGVQSHDRLGVFNNIQIVAKAAKLFKIPTVLTTVAK
CCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DSFSGPFMPEVTELFPEHDIVDRTAMNSWLDAGFRKQVAATGRKKFIIAGLWTEACVLFP
CCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHC
TLDMLREGYEVYIPADACGDLSLEAHNRAMDRAVQAGAVPITSCQFAFELQQDWARAETY
CHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHH
DGMMEILKAHSPYGIQIRFSKWALGEHASEGGTKAA
HHHHHHHHCCCCCEEEEEEECEECCCCCCCCCCCCC
>Mature Secondary Structure 
SKLEMLTPQNCAVALIDYQPAMYQGVQSHDRLGVFNNIQIVAKAAKLFKIPTVLTTVAK
CCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DSFSGPFMPEVTELFPEHDIVDRTAMNSWLDAGFRKQVAATGRKKFIIAGLWTEACVLFP
CCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHC
TLDMLREGYEVYIPADACGDLSLEAHNRAMDRAVQAGAVPITSCQFAFELQQDWARAETY
CHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHH
DGMMEILKAHSPYGIQIRFSKWALGEHASEGGTKAA
HHHHHHHHCCCCCEEEEEEECEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]