| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341974
Identifier: 146341974
GI number: 146341974
Start: 5306928
End: 5308118
Strand: Direct
Name: 146341974
Synonym: BRADO5110
Alternate gene names: NA
Gene position: 5306928-5308118 (Clockwise)
Preceding gene: 146341973
Following gene: 146341975
Centisome position: 71.17
GC content: 71.54
Gene sequence:
>1191_bases ATGCAGGCACGACGGCTGGGCGTGGTCATCGCTCTCGGCACCGCCCAGACACTGGCCTGGGCCTCGAGCTACTATCTGCC GGCGATCCTCGCCGACCCGATCGCCAGGGATCTCGGCATGTCGGACAACTGGTTCTTCGCCGCCTTCTCCGCCTCGCTGA TCATCTCCGGCCTGCTCGGCCCGCGCATCGGCCGGCAGATCGATCGGGTCGGCGGCCGGCAGGTGCTGTGCGCCTCCAAC CTCGTCCTGGCGATCGGACTGACGCTGCTCGGCCTGTCGCACTCGCTCTGGGTGATGGCGATCGCCTGGCTGTGGCTCGG AGTCGGCATGGGGCTCGGGCTCTACGACGCCGCGTTCGGCGCGCTCGGGCGCATCTATGGCAAGGACGCGCGCGGCGCGA TCACCGGCATCACATTGCTCGCCGGCTTCGCCTCGACGGTGGGCTGGCCGCTGAGCACCTGGGGTCTGGCGACGATCGGC TGGCGCGAGACCTGCTTCGCCTGGGCGGTCGCGCATCTCGTGATTGGCCTGCCGCTCAACCTGTCGCTGCCGCGGACCAC AGCGATGGCGCCCGGCGACATGCCCGTGGGCAAGCCGAACATCCCGCTCGACCGTCCAATGGTGCTGATCGCCTTCGCAA TGGCCGCGGCCTGGACGGTGACCGCGGCGATGGCGGTGCATCTGCCGCGGCTGATGCAGGCGTTCGGCGCCACGCCGGCG CAGGCGCTGTTCGCCGGCATGATGATCGGCCCCGCGCAGGTCGCTGCGCGGGTGTTCGAGGCGGGCTTCCTCAGCCGCTT CCATCCGCTCGCCTCGGCCCGCCTCGCCTGCATCACCCATCCGATCGGCGCGCTGACCATCGGCCTGTTCGGCGGCGGCG CCGCCGCCGCGTTCGCGCTGCTGCACGGCTCCGGCAACGGCATCCTGACCATCGCGCGCGGCACGCTGCCGCTCGCGATC TTCGGCCCCGCCAACTACGCCTATCGGCTCGGCCTGATCGGTGCGCCCTCGCGGATCTGCCAGGCCTTCGCGCCGCTGGT GTTCGGGCTGCTGATCGATGCGCTGGGCCGCGGCGTGCTGATCGTGTCGGCGAGCCTCAGCCTCTCGGCGCTGACGGCGC TGATGCTGCTCTCGGCGGAGCGTGCGGATGCCAGCGCCGTCCCCGGCAGCGCGCCGGACAAGGCAGCCTGA
Upstream 100 bases:
>100_bases GGGTAGAGAGTTGCTGCGCCGACGACGCCAAAGCCAAGGCGGCCGGGCGCGCGGGCTGCGGCTGCGCCTGACGCGGGCGC GAACGAGAGGTTTTTTCGGA
Downstream 100 bases:
>100_bases ACGCCGCCTTAAACCTTCCTTAACCAGCTTTCGGAGCGTTCGTCCGCGCCTCGACGCCGACGCAACGCCCGTCGCCGCGC ATATACGGAAAGTTGAAGGT
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Transporter Permease Protein; Facilitator Superfamily Transporter Transmembrane Protein; MFS Permease; Facilitator Superfamily MFS_1 Domain-Containing Protein; Transmembrane Protein; MSF Transporter Transmembrane Protein; MFS Family Permease; TRANSPORTER Facilitator Superfamily; Facilitator Family Transporter; Facilitator Superfamily Permease; Msf Transporter Protein
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MQARRLGVVIALGTAQTLAWASSYYLPAILADPIARDLGMSDNWFFAAFSASLIISGLLGPRIGRQIDRVGGRQVLCASN LVLAIGLTLLGLSHSLWVMAIAWLWLGVGMGLGLYDAAFGALGRIYGKDARGAITGITLLAGFASTVGWPLSTWGLATIG WRETCFAWAVAHLVIGLPLNLSLPRTTAMAPGDMPVGKPNIPLDRPMVLIAFAMAAAWTVTAAMAVHLPRLMQAFGATPA QALFAGMMIGPAQVAARVFEAGFLSRFHPLASARLACITHPIGALTIGLFGGGAAAAFALLHGSGNGILTIARGTLPLAI FGPANYAYRLGLIGAPSRICQAFAPLVFGLLIDALGRGVLIVSASLSLSALTALMLLSAERADASAVPGSAPDKAA
Sequences:
>Translated_396_residues MQARRLGVVIALGTAQTLAWASSYYLPAILADPIARDLGMSDNWFFAAFSASLIISGLLGPRIGRQIDRVGGRQVLCASN LVLAIGLTLLGLSHSLWVMAIAWLWLGVGMGLGLYDAAFGALGRIYGKDARGAITGITLLAGFASTVGWPLSTWGLATIG WRETCFAWAVAHLVIGLPLNLSLPRTTAMAPGDMPVGKPNIPLDRPMVLIAFAMAAAWTVTAAMAVHLPRLMQAFGATPA QALFAGMMIGPAQVAARVFEAGFLSRFHPLASARLACITHPIGALTIGLFGGGAAAAFALLHGSGNGILTIARGTLPLAI FGPANYAYRLGLIGAPSRICQAFAPLVFGLLIDALGRGVLIVSASLSLSALTALMLLSAERADASAVPGSAPDKAA >Mature_396_residues MQARRLGVVIALGTAQTLAWASSYYLPAILADPIARDLGMSDNWFFAAFSASLIISGLLGPRIGRQIDRVGGRQVLCASN LVLAIGLTLLGLSHSLWVMAIAWLWLGVGMGLGLYDAAFGALGRIYGKDARGAITGITLLAGFASTVGWPLSTWGLATIG WRETCFAWAVAHLVIGLPLNLSLPRTTAMAPGDMPVGKPNIPLDRPMVLIAFAMAAAWTVTAAMAVHLPRLMQAFGATPA QALFAGMMIGPAQVAARVFEAGFLSRFHPLASARLACITHPIGALTIGLFGGGAAAAFALLHGSGNGILTIARGTLPLAI FGPANYAYRLGLIGAPSRICQAFAPLVFGLLIDALGRGVLIVSASLSLSALTALMLLSAERADASAVPGSAPDKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40847; Mature: 40847
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQARRLGVVIALGTAQTLAWASSYYLPAILADPIARDLGMSDNWFFAAFSASLIISGLLG CCCCEEEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHC PRIGRQIDRVGGRQVLCASNLVLAIGLTLLGLSHSLWVMAIAWLWLGVGMGLGLYDAAFG HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ALGRIYGKDARGAITGITLLAGFASTVGWPLSTWGLATIGWRETCFAWAVAHLVIGLPLN HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCEECCHHHHHHHHHHHHHHHCCCCC LSLPRTTAMAPGDMPVGKPNIPLDRPMVLIAFAMAAAWTVTAAMAVHLPRLMQAFGATPA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QALFAGMMIGPAQVAARVFEAGFLSRFHPLASARLACITHPIGALTIGLFGGGAAAAFAL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCHHHHHHHH LHGSGNGILTIARGTLPLAIFGPANYAYRLGLIGAPSRICQAFAPLVFGLLIDALGRGVL EECCCCEEEEEEECCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEE IVSASLSLSALTALMLLSAERADASAVPGSAPDKAA EEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQARRLGVVIALGTAQTLAWASSYYLPAILADPIARDLGMSDNWFFAAFSASLIISGLLG CCCCEEEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHC PRIGRQIDRVGGRQVLCASNLVLAIGLTLLGLSHSLWVMAIAWLWLGVGMGLGLYDAAFG HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ALGRIYGKDARGAITGITLLAGFASTVGWPLSTWGLATIGWRETCFAWAVAHLVIGLPLN HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCEECCHHHHHHHHHHHHHHHCCCCC LSLPRTTAMAPGDMPVGKPNIPLDRPMVLIAFAMAAAWTVTAAMAVHLPRLMQAFGATPA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QALFAGMMIGPAQVAARVFEAGFLSRFHPLASARLACITHPIGALTIGLFGGGAAAAFAL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCHHHHHHHH LHGSGNGILTIARGTLPLAIFGPANYAYRLGLIGAPSRICQAFAPLVFGLLIDALGRGVL EECCCCEEEEEEECCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEE IVSASLSLSALTALMLLSAERADASAVPGSAPDKAA EEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA