| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341953
Identifier: 146341953
GI number: 146341953
Start: 5286619
End: 5288157
Strand: Direct
Name: 146341953
Synonym: BRADO5089
Alternate gene names: NA
Gene position: 5286619-5288157 (Clockwise)
Preceding gene: 146341951
Following gene: 146341954
Centisome position: 70.9
GC content: 68.94
Gene sequence:
>1539_bases ATGGTCGATGAAGTCTTCGCCCTTTCGCCGATTTCTGCCCGCGCGGCCCAGCCGAACGAGGCGGATTACGAGGCGATCCG CGACGCCTTCATGGAGACCGCGCGGGGCCGCTGGTTCCTCGGTGAGTATGCCAAACGCAACCGCAATGCTGACACCAGCA TGGTGCTCGACGCCGTAGCGCGCATCGAGCATGCGCTGGCCTCGCAACGTCTGCAGCAGCAGGAGCTCGACCAGGCCGAT ACCAGGGCCCTGCCCGAAGCGCTGGCCGCGATCCGCGCGGCGGTCGAGGACGCCGCGCTGGCGGCAGCCTCGGCCGTGGA TAGGCTCGCGCTGGAGGAAAACCTCACACCGGTGCGTAAGGGCACCCGGATCATCAAGGAGATTTCCTGGCGCTGGCGCG AGATCGGCGCCGACTCCCGGATCTGCGACCTGATCGATTCCCAGGTCGTCTCGATCGAAGCCGCCTGCGACCAGCTCGCG AACGCCGACCCCATGGCGGCGCTGCTCGCCGCGTTCGACATCATCAAGACGCGGCTGAACGAGCTGGACGAGCGGCAAGC ATCGACTTCGGCTCCGGCGAACGAAACTGCGGCATCGGCGCCCTCGACCGCCGCACCCGCTCCCAGTGCCGAGGCGCCGG TGTCGGCGCACGATCTGGCCGCAGAGTCGCCGCACGCGCCCGAGCCGGACCTCCAGCCGGTGCTTGCATCTCAAAGCCAG CTTGTTGCGGCCGTGACCGCGATCGAGGACATCGAGACGTCCGCCGCGTCGGGCAGCGTCATGGTTGCCGAAGTGACAAC CAGTAATGGTCCGGATGTTGAGGTCCCCGCCCTTGCCGCGCAAGTCTCCCCCGCCGTGCCGGTCGAGATGATCGCCGAGC CGTCCGTTGCCGAGGCCCTGGTCGAGATCGAGCAACAGGCCACCGGCGACGCTGAGGATGCGGCAGCTGCGGAGGCGCAG GACGAGGCGATCCTCGAGCTGGTCGCCGCGGAGATGGGGGCGCCCGATCCGATCGACGACGAGGATTTCAGTCGCGTACG GACTCTCGGGTTCGACATCGAGGAGCCGGCATCGGTCGACGACGACATCGTTGCCAGCTTCAGCGAACCTCTGTCGGAGC CTGAGCCCGCGGTGGCCCCAGCCGAAGCACCCGTGGTCAAGGCGGCTCCGACTCCGATCGCTCCGCCCGTGGCCGTCGCG CCGCCGATGGCGCCTCCTCCAGCTCCCAGTGAGCCCCTTCCGGCACCGCTCCCGGAGTCCATCGCTGCCGAGACACTGGC GGCTGTGGCCGCGGCTATGGCCGTCACACCCCAGCCCCCGCCAGCACCGCAGTTCGCCGAGCCGACGCCGAGCCCGGTGG CAACAGCCCCCGCTACGAGCGCGACCGCCTATACGATGCCGAAGCCCGCCTATGAGCCGTCGCTGGGGTCGACGCTGCTG TCGAACGGGCTTCTGCAGCGTCCGCAGACGCCTGCCACCGACCCGCTGGCGCCCATCCGTCGCATGACGCAGCCCGAGAA GATCGCGTTCTTCTCCTGA
Upstream 100 bases:
>100_bases TCGGGACAGTGGCATCAATTCAATTGCGATTCGGTCAATATCATGGTGATCGTTATGCCAACGCGCAGCAATTTGCGCGA TGGGTCTGTCGTGGTCTGTC
Downstream 100 bases:
>100_bases GCCGGAATGTCGGTCGTCCATCGATCATTGTGACGCTCGCGGCCCATGGCGAGGTGACGCGCATCACGTACCCGCGAACG TGACAAGCCTAACCTGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MVDEVFALSPISARAAQPNEADYEAIRDAFMETARGRWFLGEYAKRNRNADTSMVLDAVARIEHALASQRLQQQELDQAD TRALPEALAAIRAAVEDAALAAASAVDRLALEENLTPVRKGTRIIKEISWRWREIGADSRICDLIDSQVVSIEAACDQLA NADPMAALLAAFDIIKTRLNELDERQASTSAPANETAASAPSTAAPAPSAEAPVSAHDLAAESPHAPEPDLQPVLASQSQ LVAAVTAIEDIETSAASGSVMVAEVTTSNGPDVEVPALAAQVSPAVPVEMIAEPSVAEALVEIEQQATGDAEDAAAAEAQ DEAILELVAAEMGAPDPIDDEDFSRVRTLGFDIEEPASVDDDIVASFSEPLSEPEPAVAPAEAPVVKAAPTPIAPPVAVA PPMAPPPAPSEPLPAPLPESIAAETLAAVAAAMAVTPQPPPAPQFAEPTPSPVATAPATSATAYTMPKPAYEPSLGSTLL SNGLLQRPQTPATDPLAPIRRMTQPEKIAFFS
Sequences:
>Translated_512_residues MVDEVFALSPISARAAQPNEADYEAIRDAFMETARGRWFLGEYAKRNRNADTSMVLDAVARIEHALASQRLQQQELDQAD TRALPEALAAIRAAVEDAALAAASAVDRLALEENLTPVRKGTRIIKEISWRWREIGADSRICDLIDSQVVSIEAACDQLA NADPMAALLAAFDIIKTRLNELDERQASTSAPANETAASAPSTAAPAPSAEAPVSAHDLAAESPHAPEPDLQPVLASQSQ LVAAVTAIEDIETSAASGSVMVAEVTTSNGPDVEVPALAAQVSPAVPVEMIAEPSVAEALVEIEQQATGDAEDAAAAEAQ DEAILELVAAEMGAPDPIDDEDFSRVRTLGFDIEEPASVDDDIVASFSEPLSEPEPAVAPAEAPVVKAAPTPIAPPVAVA PPMAPPPAPSEPLPAPLPESIAAETLAAVAAAMAVTPQPPPAPQFAEPTPSPVATAPATSATAYTMPKPAYEPSLGSTLL SNGLLQRPQTPATDPLAPIRRMTQPEKIAFFS >Mature_512_residues MVDEVFALSPISARAAQPNEADYEAIRDAFMETARGRWFLGEYAKRNRNADTSMVLDAVARIEHALASQRLQQQELDQAD TRALPEALAAIRAAVEDAALAAASAVDRLALEENLTPVRKGTRIIKEISWRWREIGADSRICDLIDSQVVSIEAACDQLA NADPMAALLAAFDIIKTRLNELDERQASTSAPANETAASAPSTAAPAPSAEAPVSAHDLAAESPHAPEPDLQPVLASQSQ LVAAVTAIEDIETSAASGSVMVAEVTTSNGPDVEVPALAAQVSPAVPVEMIAEPSVAEALVEIEQQATGDAEDAAAAEAQ DEAILELVAAEMGAPDPIDDEDFSRVRTLGFDIEEPASVDDDIVASFSEPLSEPEPAVAPAEAPVVKAAPTPIAPPVAVA PPMAPPPAPSEPLPAPLPESIAAETLAAVAAAMAVTPQPPPAPQFAEPTPSPVATAPATSATAYTMPKPAYEPSLGSTLL SNGLLQRPQTPATDPLAPIRRMTQPEKIAFFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53237; Mature: 53237
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDEVFALSPISARAAQPNEADYEAIRDAFMETARGRWFLGEYAKRNRNADTSMVLDAVA CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHH RIEHALASQRLQQQELDQADTRALPEALAAIRAAVEDAALAAASAVDRLALEENLTPVRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH GTRIIKEISWRWREIGADSRICDLIDSQVVSIEAACDQLANADPMAALLAAFDIIKTRLN HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ELDERQASTSAPANETAASAPSTAAPAPSAEAPVSAHDLAAESPHAPEPDLQPVLASQSQ HHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHH LVAAVTAIEDIETSAASGSVMVAEVTTSNGPDVEVPALAAQVSPAVPVEMIAEPSVAEAL HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCHHHHCCCHHHHHH VEIEQQATGDAEDAAAAEAQDEAILELVAAEMGAPDPIDDEDFSRVRTLGFDIEEPASVD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCC DDIVASFSEPLSEPEPAVAPAEAPVVKAAPTPIAPPVAVAPPMAPPPAPSEPLPAPLPES HHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH IAAETLAAVAAAMAVTPQPPPAPQFAEPTPSPVATAPATSATAYTMPKPAYEPSLGSTLL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHH SNGLLQRPQTPATDPLAPIRRMTQPEKIAFFS HCCHHCCCCCCCCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVDEVFALSPISARAAQPNEADYEAIRDAFMETARGRWFLGEYAKRNRNADTSMVLDAVA CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHH RIEHALASQRLQQQELDQADTRALPEALAAIRAAVEDAALAAASAVDRLALEENLTPVRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH GTRIIKEISWRWREIGADSRICDLIDSQVVSIEAACDQLANADPMAALLAAFDIIKTRLN HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ELDERQASTSAPANETAASAPSTAAPAPSAEAPVSAHDLAAESPHAPEPDLQPVLASQSQ HHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHH LVAAVTAIEDIETSAASGSVMVAEVTTSNGPDVEVPALAAQVSPAVPVEMIAEPSVAEAL HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCHHHHCCCHHHHHH VEIEQQATGDAEDAAAAEAQDEAILELVAAEMGAPDPIDDEDFSRVRTLGFDIEEPASVD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCC DDIVASFSEPLSEPEPAVAPAEAPVVKAAPTPIAPPVAVAPPMAPPPAPSEPLPAPLPES HHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH IAAETLAAVAAAMAVTPQPPPAPQFAEPTPSPVATAPATSATAYTMPKPAYEPSLGSTLL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHH SNGLLQRPQTPATDPLAPIRRMTQPEKIAFFS HCCHHCCCCCCCCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA