| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341941
Identifier: 146341941
GI number: 146341941
Start: 5268411
End: 5270390
Strand: Direct
Name: 146341941
Synonym: BRADO5077
Alternate gene names: NA
Gene position: 5268411-5270390 (Clockwise)
Preceding gene: 146341940
Following gene: 146341944
Centisome position: 70.65
GC content: 69.7
Gene sequence:
>1980_bases TTGAATGCCTGGCGTATGAATCCTTGGCGTATGACCCGTATGTCTCTTCGTCCGATGCTTGCCGCCTGCGTGCTGGCCGG CCTGCTCTCCACGTTCGCGGCGCGTCCGGCTGCCGCCCAGTTCGGCACAGCCCCGCAGCTCCAGATCAGCTGGGAGGTTC GTAACCGCTTCCGGCTGTTTCGTGAGGAGCGCGACTTCCTCCTGCACGTCGAGAGCACCCGCGACCGCTCGATCCTGTCG GCCGAGCAGGCGCTGGCCGTGCAGAGCGACGGACGCGGCTGGGCCCGCAACATCGTCAACCGCCTGTGCATCGACCTCGC CGGCCGGGTCAACGAGCCCTGCACGCGCGACAACGTCAAGGAAAGCTATCTGACGCCGATCGACCATCCGGTCACGGTGC GCCTGACCGGACCGGTGCCGGTCGGCGCCACCTGCGCCTGGTCGTTCGACGACGGCGACGGGCCGCAGACCTCGACCTTC GACTGCGCCGAACCGGTGAACCTGCGGGTGCGCTATGGCCGCCAGACCGTCGCCACCGTCGATGTCACGAGCCCCGACGG CACGCGGCAGGTCTCGACCGGCATTCAGGTCCGCGACGTGCTGATTGCCGGCCTCGGCGACAGCATCGCCTCCGGCGAAG GCAATCCGGACCGGCCGGTCGCGCTCGCCGATGACGGCTTCTGCTTCCGCTCCTATCTCGGCGGGCCGAGCGGCCAGTAT TATCGGCCGAGCCGCGCCGGCTTCAAAGGCGGCCGGGCTTGCGAAGCCCCGGACACGCTGCAGAACTGGCAGAAGCAGAG CGCCGTCTGGTTGAACGCCGCCTGTCACCGCTCGCTGTACAGCTATCAGACCCGCACGGCGCTGGCGCTCGCCGTGCGCT ATCCGCATGTCGCGGTGACCTATCTGCCGCTCGCCTGCACCGGCGCGACCATCGCCGACGGCCTGTTCGGCAGCCAGCGC GCCCGCGAATGCACGCCGGGCCGATCGCTTGCGACCTGTGCCGGCGGCGTCAACGGCCAGCTCGGCGAATTGCGCGAGGC GCTGACCGCCGCCCAGCGCCGCCAGCCGGATCGCCGGCTCGATCTGGTGCTGCTGTCGATCGGCGCCAATGACATCAACT TCTCCGGTCTCGTCGCCGACGTCATCGTCGACACGCCGACCGAGCGCACGCTGTTCAAGCGCTCCGGCGTGATCGGCTCG GTCGACGAGTCGCGCGGCGAGCTCGCGCGCGACCTGCCGCGTGGCTTCGCCAAGCTGCGCGATGCGCTGAGGCCGCTGGT CGGCGATCTCTCGCGCGTGATCTACACGTCCTACGGCAACCCGGCGCTGAGCGGCCCCGGCACGCCCTGCCCTGGCGGTC CGGCCGGATTCGAGGTGCATCCCGCCTTCAATGCCAATCCACAGCGGCTCGCCAATGTCGCGGGCTTCGTCGAGAATGAA TTCCTGCCTGCCCTGCGCGGGCTCGCGCAATGCACCGCCGGCGTGCTGTGCCGTGATCCGCGCAGCGAACGAATGACCTT CGTCGACGCGCATCAGCCGGCGTTCGCGCAGCACGGCTTCTGCGCGCGCTCGCCGCAGGATCCGCCGTTCGACCGCGAAT GCTTCGCCTCCAATGGCGAGAGCTTCGATTCCAACATCGTCTCCGCCGCCAACCAGCCGCTGCTGTGCGGCCGCGGCGCC AGCGAATACCGTCCCTATCTGCCGCGCGCGCGCTGGATCCGCGACGCCAATGACAGCTACTTCTCGGCGATGACCTATCC ACAGGGCCTGCCGGCCGCGATGCAGCCCGCCGACATCCACGATGCGAGCTGGGGCGTGCTGTCCGCGGTGTATGGCGGCG CGGTGCATCCGACGGCGGAAGGCCATGCGGCGATGGCCGACGCGGCGTTCCCCGCCGCCGCCGAGGTGCTCAACCTCGAT GCCGCCGAACCCAGCATCGCAAGCCAACCGCTGCCGCCGAGCGGCGGCGCGCAGCAATAG
Upstream 100 bases:
>100_bases CAAGCGCCACTCGCAGGGTTGACTTGACGCTTTGAGCGAGAGCTGACAGCGGTGCGGTTGACCTGACCAGCCGCTCTCTT ACTTCCGCCCCATCGCTCAA
Downstream 100 bases:
>100_bases CTGCCGTCGTCGCCCCCCGGCGCTGTGGCATTGGCGATCGGGCTTTGCGCCGTCACTCGCCACGTCGTCATGGCCGGGCT TGTCCCGGCCATCCACGTCG
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 659; Mature: 659
Protein sequence:
>659_residues MNAWRMNPWRMTRMSLRPMLAACVLAGLLSTFAARPAAAQFGTAPQLQISWEVRNRFRLFREERDFLLHVESTRDRSILS AEQALAVQSDGRGWARNIVNRLCIDLAGRVNEPCTRDNVKESYLTPIDHPVTVRLTGPVPVGATCAWSFDDGDGPQTSTF DCAEPVNLRVRYGRQTVATVDVTSPDGTRQVSTGIQVRDVLIAGLGDSIASGEGNPDRPVALADDGFCFRSYLGGPSGQY YRPSRAGFKGGRACEAPDTLQNWQKQSAVWLNAACHRSLYSYQTRTALALAVRYPHVAVTYLPLACTGATIADGLFGSQR ARECTPGRSLATCAGGVNGQLGELREALTAAQRRQPDRRLDLVLLSIGANDINFSGLVADVIVDTPTERTLFKRSGVIGS VDESRGELARDLPRGFAKLRDALRPLVGDLSRVIYTSYGNPALSGPGTPCPGGPAGFEVHPAFNANPQRLANVAGFVENE FLPALRGLAQCTAGVLCRDPRSERMTFVDAHQPAFAQHGFCARSPQDPPFDRECFASNGESFDSNIVSAANQPLLCGRGA SEYRPYLPRARWIRDANDSYFSAMTYPQGLPAAMQPADIHDASWGVLSAVYGGAVHPTAEGHAAMADAAFPAAAEVLNLD AAEPSIASQPLPPSGGAQQ
Sequences:
>Translated_659_residues MNAWRMNPWRMTRMSLRPMLAACVLAGLLSTFAARPAAAQFGTAPQLQISWEVRNRFRLFREERDFLLHVESTRDRSILS AEQALAVQSDGRGWARNIVNRLCIDLAGRVNEPCTRDNVKESYLTPIDHPVTVRLTGPVPVGATCAWSFDDGDGPQTSTF DCAEPVNLRVRYGRQTVATVDVTSPDGTRQVSTGIQVRDVLIAGLGDSIASGEGNPDRPVALADDGFCFRSYLGGPSGQY YRPSRAGFKGGRACEAPDTLQNWQKQSAVWLNAACHRSLYSYQTRTALALAVRYPHVAVTYLPLACTGATIADGLFGSQR ARECTPGRSLATCAGGVNGQLGELREALTAAQRRQPDRRLDLVLLSIGANDINFSGLVADVIVDTPTERTLFKRSGVIGS VDESRGELARDLPRGFAKLRDALRPLVGDLSRVIYTSYGNPALSGPGTPCPGGPAGFEVHPAFNANPQRLANVAGFVENE FLPALRGLAQCTAGVLCRDPRSERMTFVDAHQPAFAQHGFCARSPQDPPFDRECFASNGESFDSNIVSAANQPLLCGRGA SEYRPYLPRARWIRDANDSYFSAMTYPQGLPAAMQPADIHDASWGVLSAVYGGAVHPTAEGHAAMADAAFPAAAEVLNLD AAEPSIASQPLPPSGGAQQ >Mature_659_residues MNAWRMNPWRMTRMSLRPMLAACVLAGLLSTFAARPAAAQFGTAPQLQISWEVRNRFRLFREERDFLLHVESTRDRSILS AEQALAVQSDGRGWARNIVNRLCIDLAGRVNEPCTRDNVKESYLTPIDHPVTVRLTGPVPVGATCAWSFDDGDGPQTSTF DCAEPVNLRVRYGRQTVATVDVTSPDGTRQVSTGIQVRDVLIAGLGDSIASGEGNPDRPVALADDGFCFRSYLGGPSGQY YRPSRAGFKGGRACEAPDTLQNWQKQSAVWLNAACHRSLYSYQTRTALALAVRYPHVAVTYLPLACTGATIADGLFGSQR ARECTPGRSLATCAGGVNGQLGELREALTAAQRRQPDRRLDLVLLSIGANDINFSGLVADVIVDTPTERTLFKRSGVIGS VDESRGELARDLPRGFAKLRDALRPLVGDLSRVIYTSYGNPALSGPGTPCPGGPAGFEVHPAFNANPQRLANVAGFVENE FLPALRGLAQCTAGVLCRDPRSERMTFVDAHQPAFAQHGFCARSPQDPPFDRECFASNGESFDSNIVSAANQPLLCGRGA SEYRPYLPRARWIRDANDSYFSAMTYPQGLPAAMQPADIHDASWGVLSAVYGGAVHPTAEGHAAMADAAFPAAAEVLNLD AAEPSIASQPLPPSGGAQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70905; Mature: 70905
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAWRMNPWRMTRMSLRPMLAACVLAGLLSTFAARPAAAQFGTAPQLQISWEVRNRFRLF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEHHHHHHHHHH REERDFLLHVESTRDRSILSAEQALAVQSDGRGWARNIVNRLCIDLAGRVNEPCTRDNVK HCCCCEEEEECCCCCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCH ESYLTPIDHPVTVRLTGPVPVGATCAWSFDDGDGPQTSTFDCAEPVNLRVRYGRQTVATV HHHCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCEEEEEE DVTSPDGTRQVSTGIQVRDVLIAGLGDSIASGEGNPDRPVALADDGFCFRSYLGGPSGQY EECCCCCCHHHHCCCEEEEHHHCCCCCHHHCCCCCCCCCEEECCCCHHHHHHCCCCCCCC YRPSRAGFKGGRACEAPDTLQNWQKQSAVWLNAACHRSLYSYQTRTALALAVRYPHVAVT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEE YLPLACTGATIADGLFGSQRARECTPGRSLATCAGGVNGQLGELREALTAAQRRQPDRRL EEHHHCCCCHHHHHHCCCCHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCE DLVLLSIGANDINFSGLVADVIVDTPTERTLFKRSGVIGSVDESRGELARDLPRGFAKLR EEEEEEECCCCCCCCCEEEEHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH DALRPLVGDLSRVIYTSYGNPALSGPGTPCPGGPAGFEVHPAFNANPQRLANVAGFVENE HHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHH FLPALRGLAQCTAGVLCRDPRSERMTFVDAHQPAFAQHGFCARSPQDPPFDRECFASNGE HHHHHHHHHHHHHCCEECCCCHHCEEEEECCCCHHHHCCCCCCCCCCCCCCHHHHHCCCC SFDSNIVSAANQPLLCGRGASEYRPYLPRARWIRDANDSYFSAMTYPQGLPAAMQPADIH CHHHHHHHHCCCCEEECCCCHHCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCC DASWGVLSAVYGGAVHPTAEGHAAMADAAFPAAAEVLNLDAAEPSIASQPLPPSGGAQQ CCCHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNAWRMNPWRMTRMSLRPMLAACVLAGLLSTFAARPAAAQFGTAPQLQISWEVRNRFRLF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEHHHHHHHHHH REERDFLLHVESTRDRSILSAEQALAVQSDGRGWARNIVNRLCIDLAGRVNEPCTRDNVK HCCCCEEEEECCCCCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCH ESYLTPIDHPVTVRLTGPVPVGATCAWSFDDGDGPQTSTFDCAEPVNLRVRYGRQTVATV HHHCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCEEEEEE DVTSPDGTRQVSTGIQVRDVLIAGLGDSIASGEGNPDRPVALADDGFCFRSYLGGPSGQY EECCCCCCHHHHCCCEEEEHHHCCCCCHHHCCCCCCCCCEEECCCCHHHHHHCCCCCCCC YRPSRAGFKGGRACEAPDTLQNWQKQSAVWLNAACHRSLYSYQTRTALALAVRYPHVAVT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEE YLPLACTGATIADGLFGSQRARECTPGRSLATCAGGVNGQLGELREALTAAQRRQPDRRL EEHHHCCCCHHHHHHCCCCHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCE DLVLLSIGANDINFSGLVADVIVDTPTERTLFKRSGVIGSVDESRGELARDLPRGFAKLR EEEEEEECCCCCCCCCEEEEHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH DALRPLVGDLSRVIYTSYGNPALSGPGTPCPGGPAGFEVHPAFNANPQRLANVAGFVENE HHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHH FLPALRGLAQCTAGVLCRDPRSERMTFVDAHQPAFAQHGFCARSPQDPPFDRECFASNGE HHHHHHHHHHHHHCCEECCCCHHCEEEEECCCCHHHHCCCCCCCCCCCCCCHHHHHCCCC SFDSNIVSAANQPLLCGRGASEYRPYLPRARWIRDANDSYFSAMTYPQGLPAAMQPADIH CHHHHHHHHCCCCEEECCCCHHCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCC DASWGVLSAVYGGAVHPTAEGHAAMADAAFPAAAEVLNLDAAEPSIASQPLPPSGGAQQ CCCHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA