Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146341935
Identifier: 146341935
GI number: 146341935
Start: 5262884
End: 5264242
Strand: Reverse
Name: 146341935
Synonym: BRADO5070
Alternate gene names: NA
Gene position: 5264242-5262884 (Counterclockwise)
Preceding gene: 146341936
Following gene: 146341932
Centisome position: 70.6
GC content: 64.16
Gene sequence:
>1359_bases TTGCTGGAGGTCATGATGGCTAAGGACGAGCTTTTCGATGGATTGCCGGAGCAGTCGGGTCCCAAAGCGCGGGAGCTTCC GAAGGGTGCGCCTCGTCTGCGGGTTCCGGAGCGCAACCAGGTCGAGCTGCGCGCGGTCGATATCGACAGCCTGATCGGGC AGGATCATCCGGCGCGGATGATCTGGACCTATGTCGAGACGCTCGACCTGAGCGAGTTGGAAGACCGAGTGAAGGCGCGG GAGAACAGGCCTGGTCATCCGGCACCGTCGCCACGCCTTTTGCTGGCGCTCTGGCTCTATGCCACCAGCGACGGCGTCGG CAGTGCTCGGGCGCTGGATCGCCTGTGCGAGAGCCATGATGCCTATCGCTGGCTGTGTGGCGGGGTATCGCTGAACTATC ACACGCTATCGGACTTCCGCGTCGGCTGTGCCGATGTGCTCGACCGCCTGATGAGCGAACATCTGGCGGCGTTGAGCGAG GCCGGGCTGGTCGATCTCGATACGCTGGCACAGGACGGGGTGCGGATCCGCGCCAATGCGGGGGCCAGCTCGTTCCGGCG CGAAGCGAGGCTGCAGCAGAAGCTGGCGGAAGCAACGGAGGTGGTGGAAGAGCTCAAGCGGGAAGTCGATGCAGATCCAG AAGCCAGCAACCGGCGCATCCGCGCGGCGCGTGAGCGCGCCGCACGCGAGCATAAACAGAAGGTCGAAGCGGCGCAGGCG GCGCTGGAGGAGATCAAGCGCAAGCGCCAGAAGCTCGAGGAAAAAGGCGGTAACGGCAAGAAGCCGAAGGAGCCTCGGGC CTCCACCACCGATCCGCAGGCGCGGCGGATGAAGATGGCCGATGCCGGCTTCCGTCCCGCCTACAACGTGCAGGTCGTCA GCGCTGCAGCTGCGATGATCGTGGTCGCAATCGACATCGACAACAACGGATCAGACGGCGGCCTGATGCGACCGATGCTG GAGCGGCTGCGCGACAAGCTGCAACGCCTGCCCAGGCGCTACCTCGTCGATGGCGGATACTGCCGTGGCGACGACATCGA ATGGGCGCATGGCCAGAACATCGAGATCTACTGTCCGCCGCGCTCGCAAAAAAGCGGTGTTGATCCTTATCTGCCCCGAG ATACCGATGGCCCTGGTGTGGCGGCCTGGCGAGCGCGCATGGCGAGCGAAGCCGGCAAGGCTCAGTATCAGCTCCGCTCG CTGTGCGAATGCATCCACGCCCGCTGGCGCAACTGGGACCTCCGGCAAGTGACGGTACGCGGCATCGACAAGGTTCGCGC CGTCGTGAGCTGGTACGCGTTCACCAACAACCTTCTGCAAGGATTGCACCTCATCGCCTGTCAAAAAGCAGCATCATAG
Upstream 100 bases:
>100_bases GACTAAAAAAGTACATCTGGGCGCGCCTTTGCCCACCCTACGAGGCTGTGAATCTTTCGATGCCTATTCTCGCTGACTAT GATTCTCTGAGCGGAGCGGT
Downstream 100 bases:
>100_bases TCGCCGGGAGCGGCATCCGAGGGATCCTCCGGGACAATCCGCCGCACAGAGCCGCCCACAACGGCTATCCCGCGGCGACA GCCCCTCGTCGCAAACTCAG
Product: putative transposase
Products: NA
Alternate protein names: Transposase; ISPsy6 Transposase; ISPpu20 Transposase; IS4 Family Transposase
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MLEVMMAKDELFDGLPEQSGPKARELPKGAPRLRVPERNQVELRAVDIDSLIGQDHPARMIWTYVETLDLSELEDRVKAR ENRPGHPAPSPRLLLALWLYATSDGVGSARALDRLCESHDAYRWLCGGVSLNYHTLSDFRVGCADVLDRLMSEHLAALSE AGLVDLDTLAQDGVRIRANAGASSFRREARLQQKLAEATEVVEELKREVDADPEASNRRIRAARERAAREHKQKVEAAQA ALEEIKRKRQKLEEKGGNGKKPKEPRASTTDPQARRMKMADAGFRPAYNVQVVSAAAAMIVVAIDIDNNGSDGGLMRPML ERLRDKLQRLPRRYLVDGGYCRGDDIEWAHGQNIEIYCPPRSQKSGVDPYLPRDTDGPGVAAWRARMASEAGKAQYQLRS LCECIHARWRNWDLRQVTVRGIDKVRAVVSWYAFTNNLLQGLHLIACQKAAS
Sequences:
>Translated_452_residues MLEVMMAKDELFDGLPEQSGPKARELPKGAPRLRVPERNQVELRAVDIDSLIGQDHPARMIWTYVETLDLSELEDRVKAR ENRPGHPAPSPRLLLALWLYATSDGVGSARALDRLCESHDAYRWLCGGVSLNYHTLSDFRVGCADVLDRLMSEHLAALSE AGLVDLDTLAQDGVRIRANAGASSFRREARLQQKLAEATEVVEELKREVDADPEASNRRIRAARERAAREHKQKVEAAQA ALEEIKRKRQKLEEKGGNGKKPKEPRASTTDPQARRMKMADAGFRPAYNVQVVSAAAAMIVVAIDIDNNGSDGGLMRPML ERLRDKLQRLPRRYLVDGGYCRGDDIEWAHGQNIEIYCPPRSQKSGVDPYLPRDTDGPGVAAWRARMASEAGKAQYQLRS LCECIHARWRNWDLRQVTVRGIDKVRAVVSWYAFTNNLLQGLHLIACQKAAS >Mature_452_residues MLEVMMAKDELFDGLPEQSGPKARELPKGAPRLRVPERNQVELRAVDIDSLIGQDHPARMIWTYVETLDLSELEDRVKAR ENRPGHPAPSPRLLLALWLYATSDGVGSARALDRLCESHDAYRWLCGGVSLNYHTLSDFRVGCADVLDRLMSEHLAALSE AGLVDLDTLAQDGVRIRANAGASSFRREARLQQKLAEATEVVEELKREVDADPEASNRRIRAARERAAREHKQKVEAAQA ALEEIKRKRQKLEEKGGNGKKPKEPRASTTDPQARRMKMADAGFRPAYNVQVVSAAAAMIVVAIDIDNNGSDGGLMRPML ERLRDKLQRLPRRYLVDGGYCRGDDIEWAHGQNIEIYCPPRSQKSGVDPYLPRDTDGPGVAAWRARMASEAGKAQYQLRS LCECIHARWRNWDLRQVTVRGIDKVRAVVSWYAFTNNLLQGLHLIACQKAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50625; Mature: 50625
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEVMMAKDELFDGLPEQSGPKARELPKGAPRLRVPERNQVELRAVDIDSLIGQDHPARM CCEEEECHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEECHHHHHCCCCCHHH IWTYVETLDLSELEDRVKARENRPGHPAPSPRLLLALWLYATSDGVGSARALDRLCESHD HHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC AYRWLCGGVSLNYHTLSDFRVGCADVLDRLMSEHLAALSEAGLVDLDTLAQDGVRIRANA CCEEHCCCCEECEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEECC GASSFRREARLQQKLAEATEVVEELKREVDADPEASNRRIRAARERAAREHKQKVEAAQA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ALEEIKRKRQKLEEKGGNGKKPKEPRASTTDPQARRMKMADAGFRPAYNVQVVSAAAAMI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCEEEE VVAIDIDNNGSDGGLMRPMLERLRDKLQRLPRRYLVDGGYCRGDDIEWAHGQNIEIYCPP EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCC RSQKSGVDPYLPRDTDGPGVAAWRARMASEAGKAQYQLRSLCECIHARWRNWDLRQVTVR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GIDKVRAVVSWYAFTNNLLQGLHLIACQKAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLEVMMAKDELFDGLPEQSGPKARELPKGAPRLRVPERNQVELRAVDIDSLIGQDHPARM CCEEEECHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEECHHHHHCCCCCHHH IWTYVETLDLSELEDRVKARENRPGHPAPSPRLLLALWLYATSDGVGSARALDRLCESHD HHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC AYRWLCGGVSLNYHTLSDFRVGCADVLDRLMSEHLAALSEAGLVDLDTLAQDGVRIRANA CCEEHCCCCEECEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEECC GASSFRREARLQQKLAEATEVVEELKREVDADPEASNRRIRAARERAAREHKQKVEAAQA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ALEEIKRKRQKLEEKGGNGKKPKEPRASTTDPQARRMKMADAGFRPAYNVQVVSAAAAMI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCEEEE VVAIDIDNNGSDGGLMRPMLERLRDKLQRLPRRYLVDGGYCRGDDIEWAHGQNIEIYCPP EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCC RSQKSGVDPYLPRDTDGPGVAAWRARMASEAGKAQYQLRSLCECIHARWRNWDLRQVTVR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GIDKVRAVVSWYAFTNNLLQGLHLIACQKAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA