| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is zraS [C]
Identifier: 146341889
GI number: 146341889
Start: 5211388
End: 5213919
Strand: Reverse
Name: zraS [C]
Synonym: BRADO5023
Alternate gene names: 146341889
Gene position: 5213919-5211388 (Counterclockwise)
Preceding gene: 146341890
Following gene: 146341888
Centisome position: 69.92
GC content: 67.34
Gene sequence:
>2532_bases GTGAACCTGCCGGAGCGGCCGCGCCGCAGCGGCAGCATCCTGCTGATCCTGCTGGTGGCGTTCGGCCTCGTCGCGGTCGC GATCGCGCTGATGACGATCGGCCGCAACCAGGCGCAGCCCTATATTCTCGGCCTGCTGTCGCTGCTCGCCACCGTCGGCC TGTTCAACCTGTTCGCCTTCGCTGCCGGCATCGTCCGCTTCGCCGACAAGGCGGCCGACGATCCCGTCATGGGCGCGATC GCCGATCACGCCTTCGACGGGCTCGCAGTGACCGATCCGCGCGGGCATGTGGTCTATGCCAACGCGGCCTATCTGAGCAT GACCGGGGCGGCCAGCGCTCAGGAGGCGCGCCCCGTGGAGCGCGTCTTCATCGGCAATCCCGACGTCTCCGAGGCCGTAT TCCGCCTGTTGAAAGCGGCGCGCGAGGGCAAGCGGCAGCAGGAGGAGGTGCGCATCACCGCCTCCGAGGGCGGCCAGGGC CGCTGGCTGCGCATGCGGGTGCGCCCGCTCGGCCAGACCAAGCGCTATCAGCGCTACGCCGTGTGGTCGATCGCTGACAT CACAAGGGATCGCGAGCGCCAGGAGGACGTGTTCCAGGAGCTCCAGCATGCCATCGAATATCTCGACCATGCGCCCTGCG GCTTTTTCTCGGTCAATCCGGAAGGCGGCCTCGTCTACGTCAACGCCACGCTCGCCAACTGGCTCGACTATGATCTCGCC GAGATCGGCTCCGGCGGATTGAAACTCGCCGACGTCGTCTCCGGCGACGGCGCATCGCTGCTGACCTCGATCGTCGCGGT GCCCGGCGAGGTCCGCACCGAGGTGTTCGACATCGACCTGAAGATGCGCGGCGGCAAGACCATGCCGGCGCGGCTCTATC ACAAGCTCGCCTTCGGCGCCGACGGCAAGCCGGGCGCCTCGCGCACCCTGGTCATCAGCCGCGCCCGCGACGAGCGCTCC GATCCGGAGCGCGCCGCCGAGGTGCGCTTCATGCGCTTCTTCGACCACACGCCGATGGCGATCGCGACCGTCGACCGCGG CGGCGCCGTGGTCCGCGCCAACGCGCGCTACGCCAAGCTGGCGCAGAGCGTGAGCGGCGACGTGGCCGCGGCGAAATCGA TCTTCCGCGCCGTCAGCCAGCGCGACCGCCACCTGCTGATCGCTGCGATCAACCAGGCCGCCGAAGGGCAGGCGGACATC CCGCCGGTCGAGGTCATGCTTGAGGGCGCGAGAGAGCGCTTCGGCCAGTTCTTCGTCACCGCGGTCGACGAGGACGAGCG CGAGACGGAAGCCGCGATCGTCTATCTGCTCGAGACCACCGAGCGGCGGGCGCTGGAGAACCAGATCAACCAGTCGCAGA AGATGGAGATGGTCGGCCAGCTCGCCGGCGGCATCGCCCACGACTTCAACAACGTGCTCTCGGCCATCATGATGGCCAAT GACTTCCTGCTGAACGCGCACAAGCCGACCGACCCGTCGTTCCAGGACATCATGCAGATCAAGCAGAACGCGACGCGCGC CGCGACGCTGGTGCGGCAGCTGCTGGCGTTCTCGCGCCGCCAGACCCTGCGGCCGCAGGTGCTCGATCTCGGCGATGCGC TGTCGGATCTGACGATGCTCTTGCGCCGGCTGATCGGCGAGAAGGTCAAGCTCGACCTCAGCCACGGCCGCGACCTCTGG CCGGTCAAGGTCGACGTCTCGCAGTTCGAGCAGGTGATCGTGAACCTCGCCGTCAACGCCCGCGACGCGATGCCGGATGG CGGCAAGCTCTCGGTGCGCACCGCCAATGTGACGGCCGAGGAGACGGCGCAGGCGGCCTACAAGGGCATGCCGGTCGCCG ACTACGTCAAGATCGAGATCAGCGACACCGGAACCGGCATTCCCGCAGAAATTCGCGAGAAGATCTTCGAGCCGTTCTTC TCGACCAAGGAGGTCGGCAAGGGCACGGGTCTCGGCCTGTCGACCGTCTACGGCATCATCAAGCAGACCGGCGGCTTCAT CTATGTCGACAGCGAGGTCGGCAAGGGCACCGCATTCCAGATCTTCCTGCCGCGCCATATCGTCGTGCCCGAGGTCCAGC CCGAGCCGCAGGCGACCAACGGCGGGCCCAAGGAAGCGGCTCCTGCCGCCGAGGCGCCGAAGCCGCGCGCGGATCTGACC GGGCAGGGCACCATCCTGCTGGTCGAGGACGAGGAGGGCCTGAGGGCGCTGAACGCGCGCGGCCTGCGCTCGCGCGGCTA CAGCGTCATCGAGGCCTCCAACGGCATCGAGGCGATGGAGGCGCTGGAGGAATGCAACGGCGAGCTCGATCTCGTGGTGT CCGACGTGGTGATGCCGGAGATGGACGGGCCGACGCTGCTGAAGGTGATGCGCGAGAAGAACCCCGACATCAAGATCATC TTCGTGTCGGGCTATGCCGAGGACGCCTTCGAGAAGAGCCTGCCGGAGAACCAGCAATTCGCCTTTCTGCCAAAACCCTT CACGCTCAGTCAGCTGGTGGCGGCGGTGAAGGAAACCATGGCGCCGCAATAG
Upstream 100 bases:
>100_bases TGGGAGCGGGAGCCGCGTGAACGGGCTGGGGCTCCCAGCCGACAGGTCGCGTCCTCGAGCCATGAGCGCCGATACAGACA ACGAAGCGTCACCGGACCAG
Downstream 100 bases:
>100_bases GTTACCAGAAGAGCCGGACAAGGCGGGCGAGCGGCTTGAAGCCGCGACCCAGAGCCGCAGCCGCGCGGCCTCGTGCCGCC TTCCTTTTCGGCCCGAAGTG
Product: two-component sensor histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 843; Mature: 843
Protein sequence:
>843_residues MNLPERPRRSGSILLILLVAFGLVAVAIALMTIGRNQAQPYILGLLSLLATVGLFNLFAFAAGIVRFADKAADDPVMGAI ADHAFDGLAVTDPRGHVVYANAAYLSMTGAASAQEARPVERVFIGNPDVSEAVFRLLKAAREGKRQQEEVRITASEGGQG RWLRMRVRPLGQTKRYQRYAVWSIADITRDRERQEDVFQELQHAIEYLDHAPCGFFSVNPEGGLVYVNATLANWLDYDLA EIGSGGLKLADVVSGDGASLLTSIVAVPGEVRTEVFDIDLKMRGGKTMPARLYHKLAFGADGKPGASRTLVISRARDERS DPERAAEVRFMRFFDHTPMAIATVDRGGAVVRANARYAKLAQSVSGDVAAAKSIFRAVSQRDRHLLIAAINQAAEGQADI PPVEVMLEGARERFGQFFVTAVDEDERETEAAIVYLLETTERRALENQINQSQKMEMVGQLAGGIAHDFNNVLSAIMMAN DFLLNAHKPTDPSFQDIMQIKQNATRAATLVRQLLAFSRRQTLRPQVLDLGDALSDLTMLLRRLIGEKVKLDLSHGRDLW PVKVDVSQFEQVIVNLAVNARDAMPDGGKLSVRTANVTAEETAQAAYKGMPVADYVKIEISDTGTGIPAEIREKIFEPFF STKEVGKGTGLGLSTVYGIIKQTGGFIYVDSEVGKGTAFQIFLPRHIVVPEVQPEPQATNGGPKEAAPAAEAPKPRADLT GQGTILLVEDEEGLRALNARGLRSRGYSVIEASNGIEAMEALEECNGELDLVVSDVVMPEMDGPTLLKVMREKNPDIKII FVSGYAEDAFEKSLPENQQFAFLPKPFTLSQLVAAVKETMAPQ
Sequences:
>Translated_843_residues MNLPERPRRSGSILLILLVAFGLVAVAIALMTIGRNQAQPYILGLLSLLATVGLFNLFAFAAGIVRFADKAADDPVMGAI ADHAFDGLAVTDPRGHVVYANAAYLSMTGAASAQEARPVERVFIGNPDVSEAVFRLLKAAREGKRQQEEVRITASEGGQG RWLRMRVRPLGQTKRYQRYAVWSIADITRDRERQEDVFQELQHAIEYLDHAPCGFFSVNPEGGLVYVNATLANWLDYDLA EIGSGGLKLADVVSGDGASLLTSIVAVPGEVRTEVFDIDLKMRGGKTMPARLYHKLAFGADGKPGASRTLVISRARDERS DPERAAEVRFMRFFDHTPMAIATVDRGGAVVRANARYAKLAQSVSGDVAAAKSIFRAVSQRDRHLLIAAINQAAEGQADI PPVEVMLEGARERFGQFFVTAVDEDERETEAAIVYLLETTERRALENQINQSQKMEMVGQLAGGIAHDFNNVLSAIMMAN DFLLNAHKPTDPSFQDIMQIKQNATRAATLVRQLLAFSRRQTLRPQVLDLGDALSDLTMLLRRLIGEKVKLDLSHGRDLW PVKVDVSQFEQVIVNLAVNARDAMPDGGKLSVRTANVTAEETAQAAYKGMPVADYVKIEISDTGTGIPAEIREKIFEPFF STKEVGKGTGLGLSTVYGIIKQTGGFIYVDSEVGKGTAFQIFLPRHIVVPEVQPEPQATNGGPKEAAPAAEAPKPRADLT GQGTILLVEDEEGLRALNARGLRSRGYSVIEASNGIEAMEALEECNGELDLVVSDVVMPEMDGPTLLKVMREKNPDIKII FVSGYAEDAFEKSLPENQQFAFLPKPFTLSQLVAAVKETMAPQ >Mature_843_residues MNLPERPRRSGSILLILLVAFGLVAVAIALMTIGRNQAQPYILGLLSLLATVGLFNLFAFAAGIVRFADKAADDPVMGAI ADHAFDGLAVTDPRGHVVYANAAYLSMTGAASAQEARPVERVFIGNPDVSEAVFRLLKAAREGKRQQEEVRITASEGGQG RWLRMRVRPLGQTKRYQRYAVWSIADITRDRERQEDVFQELQHAIEYLDHAPCGFFSVNPEGGLVYVNATLANWLDYDLA EIGSGGLKLADVVSGDGASLLTSIVAVPGEVRTEVFDIDLKMRGGKTMPARLYHKLAFGADGKPGASRTLVISRARDERS DPERAAEVRFMRFFDHTPMAIATVDRGGAVVRANARYAKLAQSVSGDVAAAKSIFRAVSQRDRHLLIAAINQAAEGQADI PPVEVMLEGARERFGQFFVTAVDEDERETEAAIVYLLETTERRALENQINQSQKMEMVGQLAGGIAHDFNNVLSAIMMAN DFLLNAHKPTDPSFQDIMQIKQNATRAATLVRQLLAFSRRQTLRPQVLDLGDALSDLTMLLRRLIGEKVKLDLSHGRDLW PVKVDVSQFEQVIVNLAVNARDAMPDGGKLSVRTANVTAEETAQAAYKGMPVADYVKIEISDTGTGIPAEIREKIFEPFF STKEVGKGTGLGLSTVYGIIKQTGGFIYVDSEVGKGTAFQIFLPRHIVVPEVQPEPQATNGGPKEAAPAAEAPKPRADLT GQGTILLVEDEEGLRALNARGLRSRGYSVIEASNGIEAMEALEECNGELDLVVSDVVMPEMDGPTLLKVMREKNPDIKII FVSGYAEDAFEKSLPENQQFAFLPKPFTLSQLVAAVKETMAPQ
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=247, Percent_Identity=30.3643724696356, Blast_Score=109, Evalue=6e-25, Organism=Escherichia coli, GI1788549, Length=279, Percent_Identity=29.3906810035842, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1788713, Length=292, Percent_Identity=28.0821917808219, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI1790300, Length=247, Percent_Identity=28.7449392712551, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI48994928, Length=240, Percent_Identity=30.8333333333333, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1790299, Length=120, Percent_Identity=30, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1786912, Length=283, Percent_Identity=23.6749116607774, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 91900; Mature: 91900
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPERPRRSGSILLILLVAFGLVAVAIALMTIGRNQAQPYILGLLSLLATVGLFNLFAF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH AAGIVRFADKAADDPVMGAIADHAFDGLAVTDPRGHVVYANAAYLSMTGAASAQEARPVE HHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCCCEEEECEEEEEECCCCCHHHCCCCC RVFIGNPDVSEAVFRLLKAAREGKRQQEEVRITASEGGQGRWLRMRVRPLGQTKRYQRYA EEEECCCCHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCEEEEEECCCCCCHHHHHHH VWSIADITRDRERQEDVFQELQHAIEYLDHAPCGFFSVNPEGGLVYVNATLANWLDYDLA EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEHHHHHHHHHHH EIGSGGLKLADVVSGDGASLLTSIVAVPGEVRTEVFDIDLKMRGGKTMPARLYHKLAFGA HHCCCCCEEEEEECCCCHHHHHHHHHCCCHHCEEEEEEEEEECCCCCCHHHHHHHHHCCC DGKPGASRTLVISRARDERSDPERAAEVRFMRFFDHTPMAIATVDRGGAVVRANARYAKL CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCHHHHH AQSVSGDVAAAKSIFRAVSQRDRHLLIAAINQAAEGQADIPPVEVMLEGARERFGQFFVT HHHHCCHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCCCHHHHHHHHHHHHCCCEEEE AVDEDERETEAAIVYLLETTERRALENQINQSQKMEMVGQLAGGIAHDFNNVLSAIMMAN EECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFLLNAHKPTDPSFQDIMQIKQNATRAATLVRQLLAFSRRQTLRPQVLDLGDALSDLTML HHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LRRLIGEKVKLDLSHGRDLWPVKVDVSQFEQVIVNLAVNARDAMPDGGKLSVRTANVTAE HHHHCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHH ETAQAAYKGMPVADYVKIEISDTGTGIPAEIREKIFEPFFSTKEVGKGTGLGLSTVYGII HHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHH KQTGGFIYVDSEVGKGTAFQIFLPRHIVVPEVQPEPQATNGGPKEAAPAAEAPKPRADLT HHCCCEEEEECCCCCCEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GQGTILLVEDEEGLRALNARGLRSRGYSVIEASNGIEAMEALEECNGELDLVVSDVVMPE CCCEEEEEECCCCHHHHHCCCHHHCCCEEEECCCCHHHHHHHHHCCCCEEEEEEHHHCCC MDGPTLLKVMREKNPDIKIIFVSGYAEDAFEKSLPENQQFAFLPKPFTLSQLVAAVKETM CCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHH APQ CCC >Mature Secondary Structure MNLPERPRRSGSILLILLVAFGLVAVAIALMTIGRNQAQPYILGLLSLLATVGLFNLFAF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH AAGIVRFADKAADDPVMGAIADHAFDGLAVTDPRGHVVYANAAYLSMTGAASAQEARPVE HHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCCCEEEECEEEEEECCCCCHHHCCCCC RVFIGNPDVSEAVFRLLKAAREGKRQQEEVRITASEGGQGRWLRMRVRPLGQTKRYQRYA EEEECCCCHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCEEEEEECCCCCCHHHHHHH VWSIADITRDRERQEDVFQELQHAIEYLDHAPCGFFSVNPEGGLVYVNATLANWLDYDLA EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEHHHHHHHHHHH EIGSGGLKLADVVSGDGASLLTSIVAVPGEVRTEVFDIDLKMRGGKTMPARLYHKLAFGA HHCCCCCEEEEEECCCCHHHHHHHHHCCCHHCEEEEEEEEEECCCCCCHHHHHHHHHCCC DGKPGASRTLVISRARDERSDPERAAEVRFMRFFDHTPMAIATVDRGGAVVRANARYAKL CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCHHHHH AQSVSGDVAAAKSIFRAVSQRDRHLLIAAINQAAEGQADIPPVEVMLEGARERFGQFFVT HHHHCCHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCCCHHHHHHHHHHHHCCCEEEE AVDEDERETEAAIVYLLETTERRALENQINQSQKMEMVGQLAGGIAHDFNNVLSAIMMAN EECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFLLNAHKPTDPSFQDIMQIKQNATRAATLVRQLLAFSRRQTLRPQVLDLGDALSDLTML HHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LRRLIGEKVKLDLSHGRDLWPVKVDVSQFEQVIVNLAVNARDAMPDGGKLSVRTANVTAE HHHHCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHH ETAQAAYKGMPVADYVKIEISDTGTGIPAEIREKIFEPFFSTKEVGKGTGLGLSTVYGII HHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHH KQTGGFIYVDSEVGKGTAFQIFLPRHIVVPEVQPEPQATNGGPKEAAPAAEAPKPRADLT HHCCCEEEEECCCCCCEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GQGTILLVEDEEGLRALNARGLRSRGYSVIEASNGIEAMEALEECNGELDLVVSDVVMPE CCCEEEEEECCCCHHHHHCCCHHHCCCEEEECCCCHHHHHHHHHCCCCEEEEEEHHHCCC MDGPTLLKVMREKNPDIKIIFVSGYAEDAFEKSLPENQQFAFLPKPFTLSQLVAAVKETM CCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHH APQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA