| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341888
Identifier: 146341888
GI number: 146341888
Start: 5210258
End: 5211232
Strand: Reverse
Name: 146341888
Synonym: BRADO5022
Alternate gene names: NA
Gene position: 5211232-5210258 (Counterclockwise)
Preceding gene: 146341889
Following gene: 146341887
Centisome position: 69.89
GC content: 71.79
Gene sequence:
>975_bases TTGCAGCGCAAAAGCGGCCTCCTCAAGGCGATGGCCGTGGCCCTGTCCTTGGCGCTGCCGACGGTGCTCGCCGTCTCGGC GGCCGACGCCCGGATCGGCGGCGGCTCGAGCTCGGGATCCCGCGGCACGCGCACCTTCTCCGCGCCGCCTCCGACCGCGA CCGCGCCGGGATCGGCGTCGCAGTTCAACCGCACCATCACCCAGCCGGGCCAGCCCGGCGGCTTCAATCAGGCTGCGCCG TCCCGCGGCGGCCTGTTCGGCGGCCGCGCCGGCGGCCTGCTCGGCGGCCTTGCCGCGGGTTTCCTCGGCGCCGGCCTGTT CGGCATGCTGTTCGGCGGCGGCCTGTTCTCCGGCCTCGGCGGCTTCGCCTCGTTCATCGGCCTGATCCTGCAGATCCTGC TGGTGGTGGTCGCGGTCCGCTTCGCGATGGCCTGGTGGCAGCGCCGCAACCAGCCGGCCTATGCGTCCGGCCCGACGCCG GGCCCCAATGACGGCCAGCAGAGCTTCCGCTCCGGCCTGAGCGGCCTCGGTGGTGGCTTTGGCGGCTTCGGTGGCGGCAG CAACCAGCCGCCGCTCCAGATCCAGCCGGCCGACTATGAAGCGTTCGAGCGCCTGCTCGGTGAGATTCAGTCGGCCTGGT CGAACGAGGATGTCGGCCGCCTGCGCCTGCTGTCGACGCCCGAGATGGCCTCGTATTTCGAGCGCGATCTCGAGCAGAAC CAGGCCCGCGGCGTGGTCAACAAGGTCACCGGCGTGAAGCTGCTGCAGGGCGACCTGGCGGAATCCTGGCGCGAGAACGG CGCCGACTATGCCACGGTGGCGATGCGGTTCACCCTCGCCGACAAGACCATCGAGCGCGCGTCGGGCCGCGTCGTCGAGG GCTCCGACCAGCCGCAGGAGGTCACGGAGATCTGGACCTTCCTGCGCCACCCCGGCGCCGACTGGCAGCTCTCGGCGATC CAGCAGGTCAGCTGA
Upstream 100 bases:
>100_bases CGCAGCCGCGCGGCCTCGTGCCGCCTTCCTTTTCGGCCCGAAGTGCCCATCTTACGGGCATCCCCATTCCGGGGACTTAT GGGAAACACAGATGAGCTTC
Downstream 100 bases:
>100_bases GCCGAAGCCTTAATGACAAAGATCAGGCGCCGCGGAGCCCTCTGCGGCGCCTTTGCTTTGCCCGGGTTCTGGCGGAATAA ACCGGGCCGGAGCGGGTTCC
Product: putative signal peptide
Products: NA
Alternate protein names: Transmembrane Protein; Mitochondrial Import Inner Membrane Translocase Subunit Tim; Tim44-Like Domain Family; Lipoprotein
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MQRKSGLLKAMAVALSLALPTVLAVSAADARIGGGSSSGSRGTRTFSAPPPTATAPGSASQFNRTITQPGQPGGFNQAAP SRGGLFGGRAGGLLGGLAAGFLGAGLFGMLFGGGLFSGLGGFASFIGLILQILLVVVAVRFAMAWWQRRNQPAYASGPTP GPNDGQQSFRSGLSGLGGGFGGFGGGSNQPPLQIQPADYEAFERLLGEIQSAWSNEDVGRLRLLSTPEMASYFERDLEQN QARGVVNKVTGVKLLQGDLAESWRENGADYATVAMRFTLADKTIERASGRVVEGSDQPQEVTEIWTFLRHPGADWQLSAI QQVS
Sequences:
>Translated_324_residues MQRKSGLLKAMAVALSLALPTVLAVSAADARIGGGSSSGSRGTRTFSAPPPTATAPGSASQFNRTITQPGQPGGFNQAAP SRGGLFGGRAGGLLGGLAAGFLGAGLFGMLFGGGLFSGLGGFASFIGLILQILLVVVAVRFAMAWWQRRNQPAYASGPTP GPNDGQQSFRSGLSGLGGGFGGFGGGSNQPPLQIQPADYEAFERLLGEIQSAWSNEDVGRLRLLSTPEMASYFERDLEQN QARGVVNKVTGVKLLQGDLAESWRENGADYATVAMRFTLADKTIERASGRVVEGSDQPQEVTEIWTFLRHPGADWQLSAI QQVS >Mature_324_residues MQRKSGLLKAMAVALSLALPTVLAVSAADARIGGGSSSGSRGTRTFSAPPPTATAPGSASQFNRTITQPGQPGGFNQAAP SRGGLFGGRAGGLLGGLAAGFLGAGLFGMLFGGGLFSGLGGFASFIGLILQILLVVVAVRFAMAWWQRRNQPAYASGPTP GPNDGQQSFRSGLSGLGGGFGGFGGGSNQPPLQIQPADYEAFERLLGEIQSAWSNEDVGRLRLLSTPEMASYFERDLEQN QARGVVNKVTGVKLLQGDLAESWRENGADYATVAMRFTLADKTIERASGRVVEGSDQPQEVTEIWTFLRHPGADWQLSAI QQVS
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33778; Mature: 33778
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRKSGLLKAMAVALSLALPTVLAVSAADARIGGGSSSGSRGTRTFSAPPPTATAPGSAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCHH QFNRTITQPGQPGGFNQAAPSRGGLFGGRAGGLLGGLAAGFLGAGLFGMLFGGGLFSGLG HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFASFIGLILQILLVVVAVRFAMAWWQRRNQPAYASGPTPGPNDGQQSFRSGLSGLGGGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC GGFGGGSNQPPLQIQPADYEAFERLLGEIQSAWSNEDVGRLRLLSTPEMASYFERDLEQN CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHH QARGVVNKVTGVKLLQGDLAESWRENGADYATVAMRFTLADKTIERASGRVVEGSDQPQE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCHHH VTEIWTFLRHPGADWQLSAIQQVS HHHHHHHHHCCCCCCHHHHHHHCC >Mature Secondary Structure MQRKSGLLKAMAVALSLALPTVLAVSAADARIGGGSSSGSRGTRTFSAPPPTATAPGSAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCHH QFNRTITQPGQPGGFNQAAPSRGGLFGGRAGGLLGGLAAGFLGAGLFGMLFGGGLFSGLG HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFASFIGLILQILLVVVAVRFAMAWWQRRNQPAYASGPTPGPNDGQQSFRSGLSGLGGGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC GGFGGGSNQPPLQIQPADYEAFERLLGEIQSAWSNEDVGRLRLLSTPEMASYFERDLEQN CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHH QARGVVNKVTGVKLLQGDLAESWRENGADYATVAMRFTLADKTIERASGRVVEGSDQPQE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCHHH VTEIWTFLRHPGADWQLSAIQQVS HHHHHHHHHCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA