Click here to switch to the map view.

The map label for this gene is amiC [H]

Identifier: 146341743

GI number: 146341743

Start: 5062156

End: 5063394

Strand: Reverse

Name: amiC [H]

Synonym: BRADO4858

Alternate gene names: 146341743

Gene position: 5063394-5062156 (Counterclockwise)

Preceding gene: 146341744

Following gene: 146341742

Centisome position: 67.9

GC content: 61.9

Gene sequence:

>1239_bases
ATGACCAGATCTGGATTGCGAGGGCTGCGCGCCGCGGCCCTCACGGGGACGCTTGTCCTTGCGTCAGGCGCATTTGCAGC
CGAAAACCCGATCAAGCTCGGCGTGCTGGAGGACCAGTCCGGCGACTTCGCCGCCGCGACCATCGGCAAGGTCCACGCCA
TTCAGCTCGCGGCCGAGGAGATCAACAAGGCCGGCGGCATCATGGGCCGTCCGCTGGAGCTCGTGACCTACGACACCCAG
TCGGATAACACCCGCTATCAGGAATTCATGCGCCGCGTGCTGCAACGGGACAAGGTCGACGTCGTGTTCGCCGGCTTCTC
GTCGGCCTCGCGCGAGGCCTACCGGCCGATCGTCGACCAGTTCAACGGCTTCGCCTTCTACAACAACCAGTATGAAGGCG
GCGTCTGCGATGGCCACATGGTGGTGACGGGCGCTGTCCCGGAGCAGCAGTTCTCGACGCTGATCCCCTACATGATGCAG
ACCTACGGCAAGAAAGTCTACACGCTCGCCGCCGACTACAATTTCGGCCAGATCTCGGCCGAATGGGTGCGCAAGATCGT
CAAGGAGAACGGCGGCGAGATGGCCGGCGAGGAGTTCATTCCGCTCGGCGTGTCGCAGTTCTCGCAGAGCATCCAGAACA
TCCAGAAGGCCAAGCCCGACTTCGTCGTGACCCTGCTCGTCGGCACCGCGCAGGCCTCCTATTACGAGCAGGCGGCCTCC
GCCAACGTCAATCTCCCGATGGCCTCCTCCGTCAACGTCGGCCAGGGCTATGAGCACAAGCGCTTCAAGCCGCCGAGCCT
GAAGGACATGTACGTCACCACCAACTACATCGAGGAAATCGACAGTCCGAAGAGTAAGGAGTTCTACGCCAAGTTCAAGG
CCAAGTTCCCGAACGAGCCCTATGTGAACCAGGAGGCCGAGAACTCCTATCTTGCGCTGTATCTCTACAAGCAGATGGTG
GAGCGGGCGAAGTCGACCAACCGCGACGAGATCCGCAAGGTGATCGCGATGGGCGACGTCTGCATGGATGCGCCGGAAGG
CAAGGTCTGTATCGATCCCAAGAGCCAGCACATGTCGCACACGATCTATCTTGCCAAGGTCGGCGCCGACCACGCGATCT
CGTTCCCGAAGGTCTGGGAGGACATCAAGCCGTACTGGCTGGGCGAAGCCGGCTGCGACCTGACCAAGAAGGATCCGATG
GCGCAATACACGCCGTCGAATCCGCCGCCGAAGCCCTGA

Upstream 100 bases:

>100_bases
GGAGTTCCTGAGGAGGCGGGCGAGGCCGCCCGATACGCCGGAACGCCCGAGCAGCATCACGCTGCAAGGCGGCAACAAGC
AAGCGATGTAGGAGCATCAC

Downstream 100 bases:

>100_bases
TCGGCGGAAGCGGCCGCTCCGGCGTCCCCTCACGCCGGAGCGGCTTGCTCTTAATCGCTTCTCGTATCTGAACCCCGTAT
CGATCGAAGACATGGACATC

Product: putative aliphatic amidase expression-regulating protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MTRSGLRGLRAAALTGTLVLASGAFAAENPIKLGVLEDQSGDFAAATIGKVHAIQLAAEEINKAGGIMGRPLELVTYDTQ
SDNTRYQEFMRRVLQRDKVDVVFAGFSSASREAYRPIVDQFNGFAFYNNQYEGGVCDGHMVVTGAVPEQQFSTLIPYMMQ
TYGKKVYTLAADYNFGQISAEWVRKIVKENGGEMAGEEFIPLGVSQFSQSIQNIQKAKPDFVVTLLVGTAQASYYEQAAS
ANVNLPMASSVNVGQGYEHKRFKPPSLKDMYVTTNYIEEIDSPKSKEFYAKFKAKFPNEPYVNQEAENSYLALYLYKQMV
ERAKSTNRDEIRKVIAMGDVCMDAPEGKVCIDPKSQHMSHTIYLAKVGADHAISFPKVWEDIKPYWLGEAGCDLTKKDPM
AQYTPSNPPPKP

Sequences:

>Translated_412_residues
MTRSGLRGLRAAALTGTLVLASGAFAAENPIKLGVLEDQSGDFAAATIGKVHAIQLAAEEINKAGGIMGRPLELVTYDTQ
SDNTRYQEFMRRVLQRDKVDVVFAGFSSASREAYRPIVDQFNGFAFYNNQYEGGVCDGHMVVTGAVPEQQFSTLIPYMMQ
TYGKKVYTLAADYNFGQISAEWVRKIVKENGGEMAGEEFIPLGVSQFSQSIQNIQKAKPDFVVTLLVGTAQASYYEQAAS
ANVNLPMASSVNVGQGYEHKRFKPPSLKDMYVTTNYIEEIDSPKSKEFYAKFKAKFPNEPYVNQEAENSYLALYLYKQMV
ERAKSTNRDEIRKVIAMGDVCMDAPEGKVCIDPKSQHMSHTIYLAKVGADHAISFPKVWEDIKPYWLGEAGCDLTKKDPM
AQYTPSNPPPKP
>Mature_411_residues
TRSGLRGLRAAALTGTLVLASGAFAAENPIKLGVLEDQSGDFAAATIGKVHAIQLAAEEINKAGGIMGRPLELVTYDTQS
DNTRYQEFMRRVLQRDKVDVVFAGFSSASREAYRPIVDQFNGFAFYNNQYEGGVCDGHMVVTGAVPEQQFSTLIPYMMQT
YGKKVYTLAADYNFGQISAEWVRKIVKENGGEMAGEEFIPLGVSQFSQSIQNIQKAKPDFVVTLLVGTAQASYYEQAASA
NVNLPMASSVNVGQGYEHKRFKPPSLKDMYVTTNYIEEIDSPKSKEFYAKFKAKFPNEPYVNQEAENSYLALYLYKQMVE
RAKSTNRDEIRKVIAMGDVCMDAPEGKVCIDPKSQHMSHTIYLAKVGADHAISFPKVWEDIKPYWLGEAGCDLTKKDPMA
QYTPSNPPPKP

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45689; Mature: 45558

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSGLRGLRAAALTGTLVLASGAFAAENPIKLGVLEDQSGDFAAATIGKVHAIQLAAEE
CCCCHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHH
INKAGGIMGRPLELVTYDTQSDNTRYQEFMRRVLQRDKVDVVFAGFSSASREAYRPIVDQ
HHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHC
FNGFAFYNNQYEGGVCDGHMVVTGAVPEQQFSTLIPYMMQTYGKKVYTLAADYNFGQISA
CCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCH
EWVRKIVKENGGEMAGEEFIPLGVSQFSQSIQNIQKAKPDFVVTLLVGTAQASYYEQAAS
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHC
ANVNLPMASSVNVGQGYEHKRFKPPSLKDMYVTTNYIEEIDSPKSKEFYAKFKAKFPNEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHCCCCCC
YVNQEAENSYLALYLYKQMVERAKSTNRDEIRKVIAMGDVCMDAPEGKVCIDPKSQHMSH
CCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEECCCHHCCEE
TIYLAKVGADHAISFPKVWEDIKPYWLGEAGCDLTKKDPMAQYTPSNPPPKP
EEEEEEECCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRSGLRGLRAAALTGTLVLASGAFAAENPIKLGVLEDQSGDFAAATIGKVHAIQLAAEE
CCCHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHH
INKAGGIMGRPLELVTYDTQSDNTRYQEFMRRVLQRDKVDVVFAGFSSASREAYRPIVDQ
HHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHC
FNGFAFYNNQYEGGVCDGHMVVTGAVPEQQFSTLIPYMMQTYGKKVYTLAADYNFGQISA
CCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCH
EWVRKIVKENGGEMAGEEFIPLGVSQFSQSIQNIQKAKPDFVVTLLVGTAQASYYEQAAS
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHC
ANVNLPMASSVNVGQGYEHKRFKPPSLKDMYVTTNYIEEIDSPKSKEFYAKFKAKFPNEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHCCCCCC
YVNQEAENSYLALYLYKQMVERAKSTNRDEIRKVIAMGDVCMDAPEGKVCIDPKSQHMSH
CCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEECCCHHCCEE
TIYLAKVGADHAISFPKVWEDIKPYWLGEAGCDLTKKDPMAQYTPSNPPPKP
EEEEEEECCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]