| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341735
Identifier: 146341735
GI number: 146341735
Start: 5048044
End: 5048469
Strand: Reverse
Name: 146341735
Synonym: BRADO4842
Alternate gene names: NA
Gene position: 5048469-5048044 (Counterclockwise)
Preceding gene: 146341736
Following gene: 146341733
Centisome position: 67.7
GC content: 62.68
Gene sequence:
>426_bases ATGACAGGGCTGCACGGAGCAAGATTGGAGCCGCGTCCCTTGGGCACGATTGCGAGCTACCATGCCCATATCTATTTCGA TTTGAACACACATGTGGAAGCCGAGCAGCTTCGTGTCTGGATCGCGGAGCGTTTTGTGGTGACGCTCGGTCGCTGGCACG AGGCGCTGGTCGGTCCGCATGAGCGCTCGATGTACCAGGTCGCTTTCGCGGTCGAGGTGTTTCCCATCCTGGTGCCCTGG CTGATGCTCAATCACGGCCGGCTGAGCGTGCTGGTCCACCCGAATACGACGCAGCCGCTGGCCGATCACACCGCGCATGC ACTCTGGATCGGGCAGCCGCTTGGCATTCGCGGTGAGAAGCTGCCCGAGACAGCTGAGGCCGAGTTGCCACTGGTCCCCA ACACGACACCGAGCCTGCCGGCCTGA
Upstream 100 bases:
>100_bases GGCGGAGTCAATGGCGGGCTGCGAGTCGCAGCCCGCCATTCGTGCGGCCATGTGTTTTCGACCATGAGGCGCTGGCAACG ATCAATGGCGAGGAGAGGCA
Downstream 100 bases:
>100_bases GCCGACGCCGCATAGATCGTCGACTGCGCGACGGTAGGGGCCGCGTTGTTCTAGTCTAAACCCGGTTCCGGAACCGGTGA CGCGTCTTGACCGAAGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Dopa 4 5-Dioxygenase Family Protein; Aromatic Ring-Cleaving Dioxygenase-Like Protein; Dioxygenase; Aromatic Ring-Cleaving Dioxygenase; Aromatic Ring-Cleaving Dioxygenase-Like; Dopa 4 5-Dioxygenase Family; DOPA-Dioxygenase-Like Protein; DOPA 4 5-Dioxygenase-Related Protein
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MTGLHGARLEPRPLGTIASYHAHIYFDLNTHVEAEQLRVWIAERFVVTLGRWHEALVGPHERSMYQVAFAVEVFPILVPW LMLNHGRLSVLVHPNTTQPLADHTAHALWIGQPLGIRGEKLPETAEAELPLVPNTTPSLPA
Sequences:
>Translated_141_residues MTGLHGARLEPRPLGTIASYHAHIYFDLNTHVEAEQLRVWIAERFVVTLGRWHEALVGPHERSMYQVAFAVEVFPILVPW LMLNHGRLSVLVHPNTTQPLADHTAHALWIGQPLGIRGEKLPETAEAELPLVPNTTPSLPA >Mature_140_residues TGLHGARLEPRPLGTIASYHAHIYFDLNTHVEAEQLRVWIAERFVVTLGRWHEALVGPHERSMYQVAFAVEVFPILVPWL MLNHGRLSVLVHPNTTQPLADHTAHALWIGQPLGIRGEKLPETAEAELPLVPNTTPSLPA
Specific function: Unknown
COG id: COG3805
COG function: function code Q; Aromatic ring-cleaving dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15752; Mature: 15621
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLHGARLEPRPLGTIASYHAHIYFDLNTHVEAEQLRVWIAERFVVTLGRWHEALVGPH CCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC ERSMYQVAFAVEVFPILVPWLMLNHGRLSVLVHPNTTQPLADHTAHALWIGQPLGIRGEK CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCC LPETAEAELPLVPNTTPSLPA CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TGLHGARLEPRPLGTIASYHAHIYFDLNTHVEAEQLRVWIAERFVVTLGRWHEALVGPH CCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC ERSMYQVAFAVEVFPILVPWLMLNHGRLSVLVHPNTTQPLADHTAHALWIGQPLGIRGEK CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCC LPETAEAELPLVPNTTPSLPA CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA