| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341421
Identifier: 146341421
GI number: 146341421
Start: 4712963
End: 4713721
Strand: Direct
Name: 146341421
Synonym: BRADO4511
Alternate gene names: NA
Gene position: 4712963-4713721 (Clockwise)
Preceding gene: 146341420
Following gene: 146341422
Centisome position: 63.21
GC content: 68.12
Gene sequence:
>759_bases ATGAGCGAGACGGCACAGGCGACCAGCGCGCCGGCGGGCAAGCCCGCCGAGAAGGAAGCGGACCACCACCCCTACACCAA GCCGCGCGATGCCGCGACCCTGATCCTGGTCGATCGCAGCGGCGCGGTGCCGAAGGTGCTGGTCGGCAAGCGCCACGACA AGGTCGTGTTCATGCCGGGCAAGTTCGTCTTCCCCGGCGGCCGCGTCGACAAGACCGATCATCGCATTCCGGTCGCCGCT CCGATGCCGGCCGAGCTCGAAGCCAACCTGTTCAAGGGCAAGCCGCAGACGACTCCGTCGCGCGCAAAGTCGCTGGCGAT CGCCGCGATCCGCGAGGCCTGCGAGGAAACCGGCCTCTGTCTCGGCCGCAAGATCAACGGCCCGGCGCCGAAGCTGGACG GACCTTGGACACCCTTTGCTGAAGCCGGCCTGCTGCCCGATCCCTCCGGTCTGTTCCTGATCGCCCGCGCCATCACCCCG CCCGGCCGCATCAAGCGCTTCGACACCCGTTTCTTCACGGCCGACGCTTCAGCCATTACCCACCGCGTCGACGGCGTCAT TCATGCCGATGCCGAGCTGGTCGAGCTGGTCTGGGTCGAGCTCGGCTCCAAGCCGCTCGCCGACCTGCACCCGATGACCA AGAACGTGCTCCACGAGCTCGACAAGCGCCTCGCCACCGGCCCGCTCCGCCACGACGCCCCAGTGCCGTTCTTCCACTTC TACGGCGGCAAGATGCAGAAGGACGTGCTCGGCGCGTAG
Upstream 100 bases:
>100_bases ATGGGCGTTCCGCATGCACGGCTTCGACGAGCAACCGGCCGAGGGCATTCCGCCGGTGTGATCAACGAACGGACCAACTA ATAAGAAAAGCGGGGAGGAC
Downstream 100 bases:
>100_bases CATCAACGAACCGGCGCCGTGCTCGTGTCAAGCGAAATGATCGCGGTCACCTTCATATGCTCCAATGCGCTTGCAATGAG GTAGGCGGTGGGCGCTCTAC
Product: putative NUDIX hydrolase
Products: NA
Alternate protein names: Hydrolase Nudix Family; Nudix Hydrolase; Hydrolase NUDIX Family; NUDIX Family Hydrolase; Hydrolase; LOW QUALITY PROTEIN NUDIX Hydrolase; Phosphohydrolase; MutT/Nudix Family Phosphohydrolase; NUDIX Superfamily Hydrolase
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSETAQATSAPAGKPAEKEADHHPYTKPRDAATLILVDRSGAVPKVLVGKRHDKVVFMPGKFVFPGGRVDKTDHRIPVAA PMPAELEANLFKGKPQTTPSRAKSLAIAAIREACEETGLCLGRKINGPAPKLDGPWTPFAEAGLLPDPSGLFLIARAITP PGRIKRFDTRFFTADASAITHRVDGVIHADAELVELVWVELGSKPLADLHPMTKNVLHELDKRLATGPLRHDAPVPFFHF YGGKMQKDVLGA
Sequences:
>Translated_252_residues MSETAQATSAPAGKPAEKEADHHPYTKPRDAATLILVDRSGAVPKVLVGKRHDKVVFMPGKFVFPGGRVDKTDHRIPVAA PMPAELEANLFKGKPQTTPSRAKSLAIAAIREACEETGLCLGRKINGPAPKLDGPWTPFAEAGLLPDPSGLFLIARAITP PGRIKRFDTRFFTADASAITHRVDGVIHADAELVELVWVELGSKPLADLHPMTKNVLHELDKRLATGPLRHDAPVPFFHF YGGKMQKDVLGA >Mature_251_residues SETAQATSAPAGKPAEKEADHHPYTKPRDAATLILVDRSGAVPKVLVGKRHDKVVFMPGKFVFPGGRVDKTDHRIPVAAP MPAELEANLFKGKPQTTPSRAKSLAIAAIREACEETGLCLGRKINGPAPKLDGPWTPFAEAGLLPDPSGLFLIARAITPP GRIKRFDTRFFTADASAITHRVDGVIHADAELVELVWVELGSKPLADLHPMTKNVLHELDKRLATGPLRHDAPVPFFHFY GGKMQKDVLGA
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27218; Mature: 27087
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETAQATSAPAGKPAEKEADHHPYTKPRDAATLILVDRSGAVPKVLVGKRHDKVVFMPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCEEEEECC KFVFPGGRVDKTDHRIPVAAPMPAELEANLFKGKPQTTPSRAKSLAIAAIREACEETGLC CEECCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCE LGRKINGPAPKLDGPWTPFAEAGLLPDPSGLFLIARAITPPGRIKRFDTRFFTADASAIT ECCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCHHHEEECCEEEECCHHHHH HRVDGVIHADAELVELVWVELGSKPLADLHPMTKNVLHELDKRLATGPLRHDAPVPFFHF HHHCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC YGGKMQKDVLGA CCCCCCHHHCCC >Mature Secondary Structure SETAQATSAPAGKPAEKEADHHPYTKPRDAATLILVDRSGAVPKVLVGKRHDKVVFMPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCEEEEECC KFVFPGGRVDKTDHRIPVAAPMPAELEANLFKGKPQTTPSRAKSLAIAAIREACEETGLC CEECCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCE LGRKINGPAPKLDGPWTPFAEAGLLPDPSGLFLIARAITPPGRIKRFDTRFFTADASAIT ECCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCHHHEEECCEEEECCHHHHH HRVDGVIHADAELVELVWVELGSKPLADLHPMTKNVLHELDKRLATGPLRHDAPVPFFHF HHHCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC YGGKMQKDVLGA CCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA