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The map label for this gene is yfhC [C]

Identifier: 146341264

GI number: 146341264

Start: 4531047

End: 4531544

Strand: Direct

Name: yfhC [C]

Synonym: BRADO4340

Alternate gene names: 146341264

Gene position: 4531047-4531544 (Clockwise)

Preceding gene: 146341263

Following gene: 146341265

Centisome position: 60.77

GC content: 65.46

Gene sequence:

>498_bases
GTGCCAAATCTGAAAACCGACGAGCATTTCATGCAGGAGGCGATCAAGATCGCCACGCAGGATGGCGCCGATCCGGCGCT
GTCACCGATCGGCTGCGTGATCGTGCTCGGCTCCGATATCGTCGCGGCCGAGCGCAACCATGTCGCCGCCAAGCACGACG
CCACGGCTCATGCGGAGATCGAGGCCATCCGCGCCGCCGGCCGCGGCTTCGACGACGGCGAACTTCGCGGCGCCACGCTC
TACACCACCCTGCAGCCGTGCGGCATGTGCACGATGGCCTCGATCTGGAGCAAGGTCGGCCGCATCGTCTACGGCGCCGG
CCGCGACGACGTGCACCAGATGTACTTCGAGGCGCGCCACGTCGACACGCTCAAATTCGTCGAGAACGCCTATCGCGACG
ACATCACGATCGAAGGCGGCGTTCTGCGCGACGCCTGCAGCAAGCTCTACTATCGACCCTGGGACGATGTCCCGATCGAG
GACCAGGGCAACCGCTGA

Upstream 100 bases:

>100_bases
GCCGGCGATGCCGCCACTGCGGCGACGCTGCGTCAGCAGCGCGAGACCCTGCTGGCGAAGATCGCCCAGATGAAGCAGCT
CGCGGCCTGAGCGCTCGATC

Downstream 100 bases:

>100_bases
AGGCCATGGCCTTCTCCACGTCACGAAGCAGGGGTGCGCGAGAGATCCAGCCGGTCGCGGTCGCCGTTGAAGCGAGAGCC
ATCTGGAGGCCCGACATGCG

Product: putative cytidine/deoxycytidylate deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MPNLKTDEHFMQEAIKIATQDGADPALSPIGCVIVLGSDIVAAERNHVAAKHDATAHAEIEAIRAAGRGFDDGELRGATL
YTTLQPCGMCTMASIWSKVGRIVYGAGRDDVHQMYFEARHVDTLKFVENAYRDDITIEGGVLRDACSKLYYRPWDDVPIE
DQGNR

Sequences:

>Translated_165_residues
MPNLKTDEHFMQEAIKIATQDGADPALSPIGCVIVLGSDIVAAERNHVAAKHDATAHAEIEAIRAAGRGFDDGELRGATL
YTTLQPCGMCTMASIWSKVGRIVYGAGRDDVHQMYFEARHVDTLKFVENAYRDDITIEGGVLRDACSKLYYRPWDDVPIE
DQGNR
>Mature_164_residues
PNLKTDEHFMQEAIKIATQDGADPALSPIGCVIVLGSDIVAAERNHVAAKHDATAHAEIEAIRAAGRGFDDGELRGATLY
TTLQPCGMCTMASIWSKVGRIVYGAGRDDVHQMYFEARHVDTLKFVENAYRDDITIEGGVLRDACSKLYYRPWDDVPIED
QGNR

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI145693172, Length=144, Percent_Identity=36.1111111111111, Blast_Score=78, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17554608, Length=125, Percent_Identity=36, Blast_Score=79, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 18182; Mature: 18050

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLKTDEHFMQEAIKIATQDGADPALSPIGCVIVLGSDIVAAERNHVAAKHDATAHAEI
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCHHHHH
EAIRAAGRGFDDGELRGATLYTTLQPCGMCTMASIWSKVGRIVYGAGRDDVHQMYFEARH
HHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHH
VDTLKFVENAYRDDITIEGGVLRDACSKLYYRPWDDVPIEDQGNR
HHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PNLKTDEHFMQEAIKIATQDGADPALSPIGCVIVLGSDIVAAERNHVAAKHDATAHAEI
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCHHHHH
EAIRAAGRGFDDGELRGATLYTTLQPCGMCTMASIWSKVGRIVYGAGRDDVHQMYFEARH
HHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHH
VDTLKFVENAYRDDITIEGGVLRDACSKLYYRPWDDVPIEDQGNR
HHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]